Capra hircus (goat): 102171718
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Entry
102171718 CDS
T02910
Symbol
NPHP1
Name
(RefSeq) nephrocystin-1 isoform X1
KO
K19657
nephrocystin-1
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
chx03037
]
102171718 (NPHP1)
Cilium and associated proteins [BR:
chx03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
102171718 (NPHP1)
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GFIT
Motif
Pfam:
SH3_1
SH3_2
SH3_9
hSH3
Presenilin
Motif
Other DBs
NCBI-GeneID:
102171718
NCBI-ProteinID:
XP_017910306
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Position
11:1622841..1688146
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AA seq
688 aa
AA seq
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MLARRQRDPLQSLQRRSQELKQQVDGLLFESQLKGALEASKRRDLYQRCIQLKQAIDENK
NALQKLKKADEPAPVGNYYQKKEEEHNLLDKLTHQLQELAVSISRENVTETGALTEREEE
ENSAEEDEEEDEDDEEESEESRGEDEEAEEEEEEKQEGESRPEATSGEYIALGDFMAQQV
GDLTFKKGEILCIIKKNSDGWWMAKNAKGNKGLIPKTYLEPYNKEEGQESSEEGSEEDTE
VGDETAEGAEVKPRTDSHWSAVRKAISEQINTVDVLTAMGAIPAGFRPSTLFQLLEEGNQ
FRASYFLQPELTPSQLAFRDLIWDAKTGSIRSRPSRVSLILTLWSCKVIPLPGVSIQVLS
RHVRLCLFDGSEVLSNIHTVRATWQPKKPQTWTFSPQVTGILPCLLDGDCFIRSNSSSPD
LGILFELGISYIRNSTGERGELSCGWVFLKLFDATGIPIPAKTYKLFLSGGTPYEKGVEV
DPSVSRRAHGSVFHQLMTMRRQPQLLVKLRSLNRRSRNTLSLLPETLIGSMCCVHLLIFY
RQILGDVLLKDRMSLNSADLISNPVLATFPRLLEESDIMDALRSSWAEKESTLKRSEKGD
RELLKAVFLLVYHDCVLPLLHSALLPPSRWAEEETEAARWKGIADFLKQNQENEGALQVL
LSPEGVHEPFDISEQTYDFLGERRKNLA
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgaggcggcagcgcgacccactccagtccttgcagcgccgcagtcaggagctg
aagcagcaggtcgatgggttgctttttgagagtcaactgaaaggagctctagaagcaagt
aaaaggagagatttgtaccaaagatgtatccaattaaaacaggcaatagatgaaaataaa
aatgctcttcaaaaattaaaaaaagctgatgaacctgcacctgtgggaaattactatcag
aagaaagaagaggagcacaatcttttggataagcttacccaccaactgcaggagcttgct
gtgtccataagcagagaaaatgtcactgaaactggggcactcactgaaagagaggaagag
gagaattctgctgaagaagatgaggaagaagacgaagacgacgaagaagaaagcgaagaa
agtaggggcgaggacgaagaagcagaagaggaagaggaagagaaacaggaaggtgaatct
cgcccagaggccacgagtggagaatacatcgctcttggagattttatggctcagcaagtg
ggagacctcacatttaaaaaaggagaaattctctgtataatcaaaaaaaactctgatggt
tggtggatggctaagaacgccaaaggaaacaaaggccttattcctaaaacctacttggag
ccctataataaagaagaaggtcaagaatcgagtgaagaaggcagtgaagaggatacagag
gtaggggatgaaacagcagaaggagcagaggtcaagccaagaaccgattctcactggagt
gctgtccggaaggccatctcagagcagataaacaccgtcgacgtgctgaccgcgatggga
gctattcctgctgggttcaggccttccaccctctttcagctcctggaggaagggaatcaa
tttcgagcaagttacttcttacagccagagctcacaccttcccaactggccttcagagat
ttaatatgggatgcaaaaactggctctatcaggtcaagaccgagccgggtctccttgatt
ctgactctctggagctgcaaggtgattcctcttccaggggtgagcatccaagttctgagc
agacacgtgcgcctctgtctgtttgacggcagtgaggttctgagcaacattcacacagtc
agggccacgtggcaacctaagaagccccaaacatggaccttttctccccaggttactggc
atcttgccctgcctgcttgatggcgactgtttcatcagatccaattcttcctctccagat
cttggaatattatttgaacttggaatttcttatattcgcaattccactggtgaaagagga
gagttgagctgtggctgggtgtttctgaaactttttgacgccactggaattcctattcca
gcaaagacttacaagctcttcttgagcggaggcaccccctatgaaaaaggcgttgaagtg
gacccttcagtgtccaggagagcacatggtagtgttttccatcagttgatgacaatgagg
aggcagcctcaacttctagtcaaactgagatctttgaacagaagatcacggaacacgcta
agtctactaccagaaacattaatcggaagcatgtgctgcgtccatttgttgatattttat
cgccagatccttggagatgttctcctgaaagacaggatgagcctgaacagtgcagattta
attagtaatccagtgctggccaccttccccaggctcttggaggagtcagacataatggat
gcactcaggagttcctgggctgagaaagagagtacgttaaaaagatcagagaagggagac
agggagctcctgaaggcggtgttcctgctggtttaccacgactgcgtgctccccctgctc
cactctgcgctcctgcccccgtctcgatgggcagaggaggagactgaggctgcccggtgg
aagggcatcgccgacttcctcaagcaaaaccaggaaaatgagggcgccctccaggttctg
ctgtcgccagagggggtccatgaacctttcgacatttccgagcagacctatgacttcttg
ggtgaaagaagaaagaacctagcctga
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