Capra hircus (goat): 102172031
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Entry
102172031 CDS
T02910
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
chx
Capra hircus (goat)
Pathway
chx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102172031 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
chx04990
]
102172031 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
chx04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
102172031 (PDLIM1)
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
DUF3322
DUF6288
Motif
Other DBs
NCBI-GeneID:
102172031
NCBI-ProteinID:
XP_005698438
UniProt:
A0A452FHJ5
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All DBs
Position
26:34804079..34840878
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AA seq
329 aa
AA seq
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MTTLQIVLQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAAIGNLCVGDVITAIDGENTSN
MTHLEAQNKIKGCTDNMTLTVARSEQKIWSPLVTEEGKRHPYKMNLASEPQEALHIGSAH
NRSAVPFTASPASSSAPRVITNQYNNPAGLYSSENISSFNNALESKTTASGQETNSRALD
HSQLPSGLVIDKESEVYKMLQEKQELNEPPKQSTSFLVLQEILESEEKGDPNKPSGFRSV
KAPVTKVAASIGNAQKLPMCDKCGTGIVGVFVKLRERHRHPECYVCTDCGTNLKQKGHFF
VEDQIYCERHARERVTPPEGYDVITVFPK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccctgcaaatagtcctgcagggcccggggccctggggcttccgcctcgtgggg
ggcaaggacttcgaacagcctctcgccatttcccgggtcactcccggaagcaaggctgct
ataggtaatttatgtgttggagatgtaatcacagccatcgatggggaaaataccagcaat
atgacacacttggaagctcagaacaaaatcaaaggctgcacagacaacatgactctcaca
gtagccagatctgaacagaaaatctggtctcctctggtgacagaggaagggaaacgccac
ccatacaagatgaatttagcctctgaaccccaagaggccctccacataggaagcgcccac
aaccggagtgccgtgccctttactgcctcacccgcctccagctctgcccccagggtcatc
acaaaccagtacaacaacccagctggcctctactcctctgaaaatatctccagcttcaac
aacgccttggagtcaaagacaacagccagtgggcaggagacgaatagcagagccttagac
cattctcagctcccaagcggactcgtcatcgacaaagaatctgaagtttacaagatgctt
caggagaaacaggagttaaatgagcctccgaaacagtctacttcgttcctggttttgcag
gaaatcctggagtctgaggagaaaggggatcccaacaagccctcaggattcagaagtgtt
aaggctccggtcaccaaagtggctgcctcaattggaaatgcccagaagctgcccatgtgt
gacaaatgtggcactggcattgtcggcgtgttcgtgaagctgcgggaacgtcaccgccac
cccgagtgttacgtgtgcaccgactgtggcaccaatctgaaacagaagggccatttcttc
gtggaggatcagatctactgtgaaaggcatgcccgggaacgggtcactccacccgagggc
tatgacgtgatcacggtgttccccaagtga
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