Capra hircus (goat): 102172127
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Entry
102172127 CDS
T02910
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chx03009
]
102172127 (UTP20)
Ribosome biogenesis [BR:
chx03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
102172127 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
DUF7051
Motif
Other DBs
NCBI-GeneID:
102172127
NCBI-ProteinID:
XP_005680570
LinkDB
All DBs
Position
5:63835141..63922062
Genome browser
AA seq
2782 aa
AA seq
DB search
MKPKPVSHKTENTYRFLTFAERLGNVNIDIIHRIDRTASYEEEVETYFFEGLLKWRELNL
TEHFGKFYKEVIDKCQSFNQLVYHQNEIVQSLKTHLQIKNSYAYQPLLDLVVQLARDLQT
DFYPHFQDFFLTITSILETQDTELLEWAFTSLSYLYKYLWRLMVKDMSNIYSMYSTLLAH
KKLHIRNFAAESFTFLMRKVSDKNALFNLMFLDLDEHPEKAEGVGQLLFEMCKGVRNMFH
SCTEKAIKLILQKLGPVTETEAQLPWILVGETLKNMVKSTALYIYKEHFGIFFECLQESL
LDLHTKVTETNCGESSEQIKRLLETYLILVKHGNGSKITKPVDVCKVLSQTLQTAHLSAS
CRETLLDVVSALILGENVSLPETLIRETIEKIFESNFERRLILDFSEVMFGMKQFEQLFL
PSFLLYIENCFLTNDAAVRDEALAILAKLILNKAAPPTAGSMAIEKYPLLFSQQTVGSYI
RQKTTKSKGGKEQISVLDHLLSIIQSPPNQDTTYLSCSWAALVVLPHIRPLEKEKVTPLV
TGFIESLFMTVDRGSFGKGNLFVLCQAVNTLLGLEESSELLRLVPVERVKNLVLTFPLEP
SVLLLADLYYQRLSLCGCRGPLSEEALMELFPKLQANISTGISKIRLLTIRILNHFEVRL
PELMEDDGLSERQSVFAILRQAELVPATVNDYREKLLHLRKLRHDVVQSAVPDGPLQEVP
LRYLLGMLYVNFSALWDPVIELISSYAHEMENKQFWKVYYEHLEKAATHAEKALQNDTRD
EEKSIGDANWEQTQEGNVGALYHKQLTLKTDLQERLDHTNFRFLLWQALAKFPERVEPRS
RELSPLFLRFINNEYYPADLQVAPTQDLRRKGRGLAIEEAEEETATRDDDELEEELGPQE
EPSQKKKTRRAAAKQLIAHLQVFSKFSNPRALYLESKLYELYLQLLLHQDQMVQKITLDC
IMTYKHPHILPYRENLQRLLEDRNFKEEIVHFSISEDNAVVKAAHRVELFPVLMRILYGR
MKNKTGSKTQGKSASGTRMSIVLRFLAGTQPEEIEIFLDLLFEPVKHFRNGECHSAVIQA
VEDLDLSKVLPLGRQHGILNSLKIVLKNISHLISAYLPKILQLLLCMTATVSHILDQREK
IQLRFINPLKNLRRLGIKMVTDIFLDWESYPFRTEEIDAVFHGVVWPQISRLGSESQYSP
TPLLKLISIWCRNARYFCFLAKQKPGHPECDILTNVFAILSAKNLSEATASLVMEIADDL
LSLPDFEPSETVLSLPVTGCVYTESADESVTIGGRLILPHVPAILQYLSKTTISAEKLKK
KKNRAQVSKELGILSKISKFVKEKEQSSLLITLLLPFLYRGSVAQDTEIDILVTIQNLLK
HCLEPTSFLKPLAKLFSVIKNKLSRQLLCTVFKALSDFESGLTYITDVVKLNAFDQRHLD
DINFDVRFSAFQTITSYIKEMQTVDINYLIPVMHNCFYNMELGDMSLSDNASMCLMNIIK
KIAALNVTEKEYREIIHRSLLEKLRKGLKSQTESIQQDYTTLLSCLIQTFPNQPEFKDLV
QLTDCHDPEMDFFENMKHIQIHRRARALKKLAKQLTEGKVVLSSKSLQNYIMPYAMAPVF
DEKMLKHENITIAATEVIGAVCRHLSWSTYVYYLKHFIHVLQAGQINQKLGVSLLVIVLE
AFHFDHKTLEEQMRKLQSEEDTTEAIELPEHEAMELEHMDEDEKEDECNKTLSDKNEEPE
NPDPAVYEGTAAKESECITKSISFLPRNKEELERTIKNIQGTITGDILPRLHKCLASTTK
RDEEHKLIKSKVVNDEEVVRVPLAFAMVKLMQSLPREVMETNLPSILLKVCALLKNRAQE
IRDIARSTLAKIIEDLGVHYLQYILKELQTTLVRGYQVHVLTFTVYMLLQGLANKLQVGS
LDSCLDIMIEIFNHELFGAVAEEKEVKQILSKVMEARRSKSYDSYEILGKFVGKDQVTKL
ILPLKEILQNTTSLKLARKVHETLRRIIAGLLVNQEMTAESILLLSYGLVSENLPLLTQK
EKNPAAPAPDPRLPPQSCLLLPPTPVRGGQKAVVSKKTNMHIFIESGLRLLHLSLKTSKV
KSSSEHVLEMLDPFVSLLIDCLGSMDVKVITGALQCLIWILRFPLPSIETKAEQLTKHLF
LLLKDYAKLGAARGQNFHLVVNCFKCVTILVKKVKSYQITQKQLQVLLAYAEEDIYDTTR
QATAFGLLKAILSRKLLVPEIDDVMRKVSKLAISAQSEPARVQCRQVFLKYILDYPLGDK
LRPNLEFMLAQLTYEHETGRESALEMIAYLFDTFPQGLLHENCGMFFIPLCLMMVNDDSA
TCKKMASMAIKSLLSKISLEKKDWLFDMVTTWFGAKKRLNRQLAALICGFFAESEGVNFE
RRLGIVLPVIEKEIDPENFTDIMEETEEKAADRLLFSFLILISKLIKECNIIQFTKPSET
LSKIWSHVQSHLRYPHSWVWLTAAQIFGLLFASCQPEELIRKRHVRKTKNKVSEPVAICF
LTSDLEQKMKSICLASCHQLHSKFLDQSLGEQVVKNLLFVAKVLYLLEPDSGDKQGDIKE
DMEEQEVLGDGMAGEGVEEHKPCADEKEEHSRPATLLWLIQKLSRIAKVEAAYSPRNPLK
RTCIFKFLGAIAMDLGRDKVKPYLPVIIAPLFRELNSTYSEQDPSLKNLSQEIIELLKKL
VGLESFSLAFASVQKQATEKRALRKKRKALEFVTNPDIAAKKKLKKHKNKSEAKKRKIEF
LRPGYKAKRQKSHSLKDLAMVE
NT seq
8349 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaaagccggtttcccacaagaccgagaacacgtaccggtttcttacatttgct
gagcgactggggaatgtgaatatcgacattattcaccggattgatagaactgcaagctat
gaggaggaagttgaaacctacttttttgagggtctgctgaagtggagagaattgaacctg
acggaacactttgggaaattttacaaagaggttattgacaaatgccagtcattcaatcag
ctggtataccatcaaaatgagatagttcagagtttgaagactcatctgcaaatcaagaac
agttacgcctatcagccccttttggatttggttgtacagttggcacgagatctgcagaca
gacttctatccccattttcaggatttttttctgaccatcacctcaatcctggagactcag
gacacggagttgttagagtgggctttcacctctctgtcatacctgtacaagtacctttgg
agactgatggtgaaagacatgtccaatatatacagcatgtatagtacacttctggctcat
aaaaagctacatataagaaattttgctgctgaaagctttacttttttgatgagaaaggtt
tctgataaaaatgcacttttcaatttaatgtttcttgatcttgatgaacatccagaaaaa
gcagaaggcgttggacagttgctatttgaaatgtgcaaaggagttagaaatatgtttcac
tcttgcacagagaaggcaataaagctaattttgcaaaagctcggaccagttacagaaaca
gaagctcaacttccatggattttagttggagaaacactcaaaaacatggtcaaatccact
gcactctatatctacaaggaacattttggaatattctttgaatgtttgcaagaatcactc
ctggacctacatacaaaagtaaccgaaactaactgtggtgaaagttctgaacagattaaa
aggttgttagaaacatacctgatacttgtaaaacatggaaatggatcaaagataaccaaa
cctgtagatgtttgtaaagtcttgtcgcaaacattacaaacagcccatctctctgcatct
tgccgggagacactcttggatgtagtttctgctttgatcctaggcgaaaatgtttccttg
ccagagaccctcattagagaaaccatagaaaaaatttttgaaagcaactttgaaagacgc
ttaattttggatttttcagaagtcatgtttggtatgaagcagtttgagcagcttttccta
cccagctttctcttgtatattgagaattgcttcctgacgaatgatgctgcagtcagagat
gaagctctggccattttggccaagctcattcttaacaaagcagcacctcccaccgctggc
tccatggcgattgagaagtaccctctgcttttctcccagcagacggtgggatcctatata
aggcagaagacgacgaaatccaagggaggaaaggaacagatctcggtgttggaccatctt
ttatctataattcagtcacccccgaatcaagatactacttacctttcatgttcttgggcg
gcccttgtcgtgttacctcatattaggcccctggagaaggagaaggtgacaccactagtc
accggcttcattgagtccctcttcatgactgttgacagagggagctttggaaaaggaaac
ttatttgttctttgtcaagctgtaaatactctgctaggtttggaagaatcttccgaactt
cttcgtttggttcctgtggaacgtgtgaagaacttagtgttaacgtttcctttggagcca
tctgtgttgctgttggctgatctctattatcagagattatccttatgtggctgcaggggg
ccactttcagaggaggctttaatggaattatttcccaagctacaagcaaacatttcgact
ggtatatccaagattcgacttttgacaataaggatcctaaaccactttgaggttaggctt
ccggaattaatggaggatgatgggctctcagagcgtcagtctgtttttgctatactgcgc
caggcagagctcgtgccagccactgtgaatgattacagagagaagcttcttcatttgaga
aaactcaggcacgatgtagtgcagtctgcagtccctgatgggccattacaggaggtgcca
cttcgttacttattaggcatgttgtatgtaaacttcagtgctctctgggatcctgttatt
gaactcataagttcttatgcacatgaaatggaaaataagcagttttggaaagtctactat
gagcatctagaaaaagcagctacacatgctgagaaagcattgcagaatgacacaagagat
gaggagaagtccattggagatgcaaattgggagcagactcaggaaggaaacgttggagcg
ctttatcacaagcagttgacattgaaaactgaccttcaggaaagactggaccacaccaat
tttcgttttttgctctggcaagctctggcaaaatttccagaaagggtggagcctcggtcc
agggagctttccccacttttcttgaggtttatcaacaatgagtattacccagcagatctg
caggtcgcaccaacccaggatctgcgaagaaaaggcagagggctggcaatagaggaagca
gaagaggagactgccaccagagacgacgacgagttggaggaagagctggggcctcaagag
gagccctcacagaagaaaaagacaagaagagctgcggcaaagcagttaattgctcatttg
caagttttctctaagttttcaaatccacgagccttatatctggaatccaaattatacgag
ctgtatcttcagttgttgctacatcaggatcagatggtacaaaaaataacactggattgc
ataatgacatataaacatccacatattctcccttacagggaaaacctacaaagattgctt
gaagacagaaactttaaggaagagatagtgcattttagcatttctgaagacaatgcagtg
gtgaaagcagcccaccgagtagagctgtttcctgttctgatgagaattttgtatggtcga
atgaagaataagactggaagtaaaactcaggggaaatctgcttctggtacccgcatgtcc
atcgtcctgaggttcttggcagggacccagccagaagagatcgagatattcttagacctg
ctgtttgagcctgtgaagcacttcaggaacggagagtgccattctgctgtcattcaagca
gtagaagatttagatttgtctaaagttcttcctttaggtcgtcagcacggcatattaaat
agccttaagatagtcttgaagaacattagtcacctgatcagcgcatatttaccaaagatt
ctgcagctactgctctgcatgactgcaactgtatcacacatccttgaccaacgagaaaag
atacagctgaggtttattaacccactgaaaaatttaagacgtcttggaatcaaaatggta
actgatatctttttggattgggagtcctatccattcagaacagaagaaattgatgcagta
tttcatggtgtagtttggccccagatcagcaggcttggatctgaaagtcagtattctcct
actcctctactgaagctaattagtatctggtgcagaaatgcaagatatttctgtttcctg
gctaaacagaaacctgggcacccagaatgtgatatcctgaccaatgtttttgcgattctc
tcagcaaagaacctctctgaagccacagctagtcttgtgatggaaatagccgacgacctt
cttagtcttccagattttgaaccctcagaaacagttttgagcttgccggtgacaggatgt
gtatacacagaaagtgcagatgagtctgtcacaataggaggacgattaattctacctcat
gtacctgctattctccaatatctcagcaaaaccacaataagtgcagaaaagttaaaaaag
aagaagaatagagcacaagtcagtaaggaacttggcattctttcaaagatcagcaagttt
gtgaaagaaaaagaacaaagttctctgctcattacactgctcctgccgttcctctaccgt
ggcagtgttgctcaggacacagaaattgacattctggtgacaatacaaaacctgttgaaa
cattgtctggagcctacaagcttcctcaagcctctagcaaaactgttctcagttattaag
aacaaattgtcaagacagttgctttgtacagttttcaaggccctttctgattttgagagt
ggattaacatatattactgatgttgtcaagcttaacgcctttgatcaaagacatcttgat
gatatcaactttgatgttcgcttctcggcgttccagaccattacctcttacattaaagag
atgcaaactgtagacattaactacctaattccggttatgcataattgtttctataacatg
gagttaggagacatgtctttaagtgataatgcaagcatgtgcttgatgaatatcatcaaa
aagattgctgctttgaatgtcacagagaaagaatatagagaaatcattcatcgttctctc
ctggagaaattgaggaaaggattgaagagccagacagagagtattcaacaggattatacc
acactgctttcctgtttaattcaaacctttccaaatcaaccagaatttaaagacttggtt
cagcttactgactgccacgatccggaaatggacttctttgagaatatgaagcacattcag
atccacagaagagcaagagccttgaagaaactggcaaaacaactaacggaaggcaaagtc
gtgctgtcttctaaatctcttcagaattacatcatgccttatgctatggcaccagttttt
gacgagaaaatgctcaagcatgaaaatataaccattgctgccacagaagtcattggagct
gtttgcagacatctctcttggtcaacatatgtatactacttgaaacatttcattcatgtc
ttacaggcgggacagatcaatcaaaagttgggtgtcagtttgctagtgatagtgttagaa
gcattccactttgaccacaaaactcttgaagaacaaatgagaaaacttcagagtgaagag
gataccacagaagcgattgagttgccagagcacgaagccatggaattagagcatatggat
gaggatgagaaggaggatgaatgtaataagactttgtcggacaagaatgaagagccagag
aaccctgacccagctgtttatgaagggacagcggctaaggaatctgagtgtatcacaaag
tccatctccttccttcctcggaataaggaagaattagagagaacaattaaaaatatccaa
ggaaccataactggggacatcctgcccaggctccataaatgcctggcatctacgactaaa
agagacgaagaacacaaactcataaaatcgaaggttgtgaatgatgaggaagtggttcga
gttcctttagcttttgccatggttaaactaatgcagtcccttccaagagaagttatggaa
actaatctgccaagtattttgctgaaagtgtgtgccctcctcaagaacagagcacaggaa
atcagagacattgcacgcagcacccttgcaaaaataatagaggacctgggtgtgcattat
ctacaatatattttaaaagaattacagactacacttgtgcgtggctatcaggttcatgtg
ctgactttcactgtctatatgttgctgcaaggcctcgccaacaagctccaagtcgggagt
ttggactcttgtttggatataatgattgagatttttaaccacgagttgtttggtgccgtt
gctgaagagaaggaagtaaagcagatcctctccaaggtcatggaggcacgaagaagcaag
agttacgattcttatgaaattttgggcaagtttgtaggaaaagatcaggttacaaaactt
atccttccactgaaagagatcttgcaaaataccacaagtttaaaactggcccggaaagtt
cacgaaaccttacgccgaatcatagcaggattacttgtaaaccaggaaatgacagcagaa
tccattctgttgcttagttatggtttggtcagcgaaaatctccccctgttaacacagaaa
gaaaaaaatccagcagcccccgcaccagatccacgcctgccaccccagagctgtcttctg
ctccccccaactccagttcgaggcggacagaaagctgtcgtgagcaagaaaaccaacatg
cacatatttattgagtctgggcttcggctgttgcaccttagtctgaagacctccaaggtc
aagtcttcaagtgaacatgtcctggaaatgttggatccttttgtgtctctcctcatagac
tgcctgggttccatggatgtgaaggtgatcacaggtgctttgcaatgcctgatctggatc
ttgaggttccccctgccatctatagaaacaaaagcagagcagctgacaaaacaccttttt
cttttgctgaaggactatgcaaaactcggggctgccaggggacagaacttccacttggtg
gtaaattgtttcaagtgtgtgaccatacttgtgaagaaagtgaagtcgtaccagataact
caaaagcagcttcaagttctactagcatatgctgaggaggacatctatgatactacaaga
caagccactgcatttggtcttctaaaggccattttatcaagaaagttgttggtcccagaa
attgatgatgtcatgcggaaagtatccaagctggcaatctctgcacaaagcgaacctgcc
agagtccagtgcagacaggtttttctgaaatacattcttgactatcctctgggtgacaaa
ttgcgaccaaacttggaattcatgcttgctcaactgacttatgaacatgagaccgggaga
gagtccgccttggaaatgattgcttatctctttgacacgttccctcagggactgctccat
gagaactgtggaatgttctttattcctctttgtctaatgatggtgaacgatgactctgcc
acgtgtaagaagatggcatccatggcaatcaaatccttactcagtaaaatcagccttgag
aaaaaagattggctcttcgatatggttaccacctggtttggggcaaagaagcgcttaaat
cgacaactagctgccctgatctgtggcttttttgcggagagtgaaggagtcaattttgag
agaagacttggaattgttctccctgtgattgaaaaggagattgatcctgaaaactttaca
gatatcatggaagagactgaagaaaaagctgcagatcgccttctgttcagttttcttata
ctgataagtaaactcatcaaggaatgtaatatcattcagtttaccaagccctctgaaact
ctgagtaaaatctggagtcacgtgcagtcccacttgagatatccgcacagctgggtgtgg
ctcacagcagcccagatttttggattactctttgcttcttgccaacctgaggaacttatt
agaaaacggcatgtcagaaaaactaaaaacaaagtctcggaacctgttgcaatctgcttc
ctaacaagtgaccttgagcaaaagatgaaaagtatctgcctagcctcttgccatcagttg
cactccaaattcttggaccagtctctaggagagcaggttgttaagaatttgttgtttgta
gccaaagtcttgtatttattggaacctgattctggggacaagcaaggggacataaaagaa
gacatggaagaacaggaagttttaggtgatggcatggccggagagggtgtggaagaacac
aagccgtgtgcagatgagaaagaagagcacagcaggccagccacactgctctggctgatc
cagaaattgtcccggatcgcaaaagtggaagctgcgtattcacctagaaaccccttaaag
agaacatgcatctttaaatttctcggagccatagcaatggaccttggaagagacaaggtg
aagccgtacctcccagtgatcatagcgcctttgttccgggaactgaacagcacctattca
gagcaggatccttcactgaagaatctatcccaggaaatcatagaattactgaaaaagctg
gtcgggcttgagagcttctcattagcctttgcctctgtacagaaacaggctactgagaaa
agggcactccggaaaaagagaaaggctttggagtttgtaactaatcctgatattgctgcc
aagaaaaagctgaagaaacacaaaaataaaagtgaagcaaagaagagaaagattgagttc
ctgcgtccaggctataaggccaagagacaaaagagccacagcctgaaagatttagcaatg
gtggagtaa
DBGET
integrated database retrieval system
