KEGG   Capra hircus (goat): 102172215
Entry
102172215         CDS       T02910                                 
Symbol
PUM1
Name
(RefSeq) pumilio homolog 1 isoform X1
  KO
K17943  pumilio RNA-binding family
Organism
chx  Capra hircus (goat)
Pathway
chx05017  Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:chx00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05017 Spinocerebellar ataxia
    102172215 (PUM1)
SSDB
Motif
Pfam: PUF
Other DBs
NCBI-GeneID: 102172215
NCBI-ProteinID: XP_005676794
EnsemblRapid: ENSCHIG00000012952
LinkDB
Position
2:complement(13319356..13442585)
AA seq 1189 aa
MSVACVLKRKAVLWQDSFSPHLKHHPQEPANPNMPVVLTSGTGSQAQPQPAANQALAAGT
HSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEH
QVRSMDELNHDFQALALEGRAMGEQLLPGKKFWETDESSKDGPKGIFLGDQWRDSAWGTS
DHSVSQPIMVQRRPGQSFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGF
GPRDADSDENDKGEKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPG
NCQNSANEVDLLGPNQNGSEGLAQLTSTNGAKPVEDFSNMESQSVPLDPMEHVGMEPLQF
DYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIAGL
APAAFVPNPYIISAAPPGTDPYTAGLAAAATLGPAVVPPQYYGVTPWGVYPASLFQQQAA
AAAAATNSANQQTTPQAQQGQQQVLRGGASQRPLTPNQNQQGQQADPLVAAAAVNSALAF
GQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVA
AAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPSNNLASSSFYGNNSLSSNSQSSS
LFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKR
TSSSLTPIGHSFYNGLSFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTN
GSGRYISAAPGAEAKYRSASSASSLFSPSSTLFSSSRLRYGMSDVMPSGRSRLLEDFRNN
RYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGN
YVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVREL
DGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHC
LPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKF
ASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQR
KIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
NT seq 3570 nt   +upstreamnt  +downstreamnt
atgagcgttgcatgtgtcttgaagagaaaagcagtgctttggcaggactctttcagcccc
cacctgaaacatcaccctcaagaaccagctaatcccaacatgcctgttgttttgacatct
ggaacagggtcgcaagcgcagccacaaccagctgcaaatcaggctcttgcagctgggaca
cactccagccctgtcccaggatccataggagttgcaggccgttcccaggacgacgctatg
gtggactacttctttcagagacagcatggtgagcagcttgggggaggaggaagtggtgga
ggcggctataataatagcaaacatcgatggcctactggggataacattcatgcagaacat
caggtacgttctatggatgaactgaatcatgattttcaagcacttgctctggagggaaga
gcgatgggagagcagctcttgccaggtaaaaagttttgggaaacagatgaatccagcaaa
gatggaccaaaaggaatattcctgggtgatcaatggcgagacagtgcctggggaacatca
gatcattcagtttcccagccaatcatggtgcagagaagacctggtcagagtttccatgtg
aacagtgaggtcaattctgtactgtccccacggtcggagagtgggggactaggcgttagc
atggtggagtatgtattgagctcatccccgggcgattcctgtctaagaaaaggaggattt
ggcccaagggatgcagacagtgatgaaaacgacaaaggtgaaaagaagaacaagggtacg
tttgatggagataagctaggagatttgaaggaggagggtgatgtgatggacaagaccaat
ggtttaccagtgcagaatgggattgacgcagacgtcaaagattttagccgtacccctggt
aattgccagaactctgctaatgaagtggatcttctgggtccaaaccagaatggttctgag
ggtttagcccagctgaccagcaccaatggtgccaagcctgtggaggatttctccaacatg
gagtcccagagtgtccccttggaccccatggaacatgtgggcatggagcctcttcagttt
gattattcaggcacgcaggtacctgtggactcagcagcagcaactgtgggactttttgac
tacaattctcaacaacagctgttccaaagacccaatgcgcttgctgtccagcagttgaca
gccgctcagcagcagcagtatgcgctggcagccgcacatcaaccccacattgcaggttta
gctcccgctgcgttcgtccccaacccatatatcatcagtgctgcacccccagggacggac
ccctacacagctggattggctgcagcagcgacgctcggcccggctgtggtccctccccag
tattacggagttactccctggggagtctaccctgccagtcttttccagcagcaagccgcc
gccgctgctgcagcaacaaattctgctaatcagcagaccaccccacaggctcagcaaggg
cagcagcaggttctccgtggaggagccagccagcgtcctttgaccccaaatcagaaccag
cagggacagcaagccgatccactagtggcagccgcagcagtgaactctgcccttgcattt
ggacagggactggctgcaggcatgccaggttatccagtcttggctcccgctgcttactat
gaccaaaccggtgcccttgtggtgaatgcaggagcgaggaatggtcttggagctcctgtt
cgacttgtagctcctgccccagtcatcattagttcctcagctgcacaagcagctgttgca
gcggccgcagcttcagcaaatggagcagccggtggtcttgctggaacaacaaatggacca
tttcgccctttaggaactcagcagccccagccccagccccagcagcagcccagtaacaac
ctggcatctagctctttctacggcaacaactctctgagcagcaattcacagagcagctcc
ctcttctcccagggctccgcccagcctgccaacacatccttgggatttggaagtagcagt
tctctcggcgccaccctgggatcagcccttggagggtttggaacagcagttgcaaactcc
aacactggcagtggctcccgccgtgactccctgactggcagcagtgacctttataagagg
acatcgagcagcttgacccccattggacacagtttttataacggccttagcttttcctcc
tctcctggacccgtgggcatgcctctccctagtcagggaccaggacattcacagacacca
cctccttccctctcttcacatggatcctcttcaagcttaaacctgggaggactcacaaac
ggcagtggaagatacatctctgctgctccaggcgctgaagccaagtaccgcagcgcaagc
agtgcctccagcctcttcagccccagcagcacccttttttcctcctcccgtttgcgatat
ggaatgtctgatgtcatgccctctggcaggagcaggcttttggaagattttcgaaataac
cgatatcccaatttacaattgcgggagattgctgggcacataatggagttttcccaagac
cagcatggttccagattcattcagctgaaacttgagcgtgccacaccagccgaacgccaa
cttgtcttcaatgaaatcctgcaggccgcttaccagctgatggtggatgtatttggaaat
tacgtcattcagaagttctttgaatttggcagccttgaacagaagctggctttggctgag
cggattcgaggccacgtcctgtcattggcattgcagatgtatggctgccgtgttatccag
aaagctcttgagttcattccctcagaccagcaggtaattaatgaaatggttcgggaactg
gatggccacgtcctcaagtgtgtgaaagaccagaatggcaatcacgtggtgcagaagtgc
atcgaatgtgtgcagccccagtctctgcagtttatcatcgatgcgtttaaggggcaggtg
tttgctttgtccacgcatccttatggctgccgagtgattcagaggatcctggagcactgt
ctccccgaccagacactccctattttagaggagcttcaccagcacacagagcaacttgta
caggatcaatatggaaattacgtaatccagcatgtattggagcatggtcgtcctgaggat
aaaagtaaaattgtagcagaaattcgaggcaatgtacttgtgttgagtcagcacaaattt
gcaagcaacgttgtggagaagtgtgtcactcacgcctcccgtacagagcgcgctgtgctt
atcgacgaggtgtgcaccatgaacgatggtccccacagtgccttatacaccatgatgaag
gaccagtatgccaactacgtggtccagaagatgatcgatgtggcagagccagctcagagg
aagatcgtcatgcacaagatccggccccacatcgcgactcttcgcaagtacacttacggc
aagcacatcctggccaagctggagaaatactacatgaagaatggcgttgacttggggccc
atctgtggcccccctaatggtatcatctga

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