Capra hircus (goat): 102172215
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Entry
102172215 CDS
T02910
Symbol
PUM1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
chx
Capra hircus (goat)
Pathway
chx05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
102172215 (PUM1)
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Gene cluster
GFIT
Motif
Pfam:
PUF
Motif
Other DBs
NCBI-GeneID:
102172215
NCBI-ProteinID:
XP_005676794
EnsemblRapid:
ENSCHIG00000012952
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Position
2:complement(13319356..13442585)
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AA seq
1189 aa
AA seq
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MSVACVLKRKAVLWQDSFSPHLKHHPQEPANPNMPVVLTSGTGSQAQPQPAANQALAAGT
HSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEH
QVRSMDELNHDFQALALEGRAMGEQLLPGKKFWETDESSKDGPKGIFLGDQWRDSAWGTS
DHSVSQPIMVQRRPGQSFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGF
GPRDADSDENDKGEKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPG
NCQNSANEVDLLGPNQNGSEGLAQLTSTNGAKPVEDFSNMESQSVPLDPMEHVGMEPLQF
DYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIAGL
APAAFVPNPYIISAAPPGTDPYTAGLAAAATLGPAVVPPQYYGVTPWGVYPASLFQQQAA
AAAAATNSANQQTTPQAQQGQQQVLRGGASQRPLTPNQNQQGQQADPLVAAAAVNSALAF
GQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVA
AAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPSNNLASSSFYGNNSLSSNSQSSS
LFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKR
TSSSLTPIGHSFYNGLSFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTN
GSGRYISAAPGAEAKYRSASSASSLFSPSSTLFSSSRLRYGMSDVMPSGRSRLLEDFRNN
RYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGN
YVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVREL
DGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHC
LPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKF
ASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQR
KIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgcatgtgtcttgaagagaaaagcagtgctttggcaggactctttcagcccc
cacctgaaacatcaccctcaagaaccagctaatcccaacatgcctgttgttttgacatct
ggaacagggtcgcaagcgcagccacaaccagctgcaaatcaggctcttgcagctgggaca
cactccagccctgtcccaggatccataggagttgcaggccgttcccaggacgacgctatg
gtggactacttctttcagagacagcatggtgagcagcttgggggaggaggaagtggtgga
ggcggctataataatagcaaacatcgatggcctactggggataacattcatgcagaacat
caggtacgttctatggatgaactgaatcatgattttcaagcacttgctctggagggaaga
gcgatgggagagcagctcttgccaggtaaaaagttttgggaaacagatgaatccagcaaa
gatggaccaaaaggaatattcctgggtgatcaatggcgagacagtgcctggggaacatca
gatcattcagtttcccagccaatcatggtgcagagaagacctggtcagagtttccatgtg
aacagtgaggtcaattctgtactgtccccacggtcggagagtgggggactaggcgttagc
atggtggagtatgtattgagctcatccccgggcgattcctgtctaagaaaaggaggattt
ggcccaagggatgcagacagtgatgaaaacgacaaaggtgaaaagaagaacaagggtacg
tttgatggagataagctaggagatttgaaggaggagggtgatgtgatggacaagaccaat
ggtttaccagtgcagaatgggattgacgcagacgtcaaagattttagccgtacccctggt
aattgccagaactctgctaatgaagtggatcttctgggtccaaaccagaatggttctgag
ggtttagcccagctgaccagcaccaatggtgccaagcctgtggaggatttctccaacatg
gagtcccagagtgtccccttggaccccatggaacatgtgggcatggagcctcttcagttt
gattattcaggcacgcaggtacctgtggactcagcagcagcaactgtgggactttttgac
tacaattctcaacaacagctgttccaaagacccaatgcgcttgctgtccagcagttgaca
gccgctcagcagcagcagtatgcgctggcagccgcacatcaaccccacattgcaggttta
gctcccgctgcgttcgtccccaacccatatatcatcagtgctgcacccccagggacggac
ccctacacagctggattggctgcagcagcgacgctcggcccggctgtggtccctccccag
tattacggagttactccctggggagtctaccctgccagtcttttccagcagcaagccgcc
gccgctgctgcagcaacaaattctgctaatcagcagaccaccccacaggctcagcaaggg
cagcagcaggttctccgtggaggagccagccagcgtcctttgaccccaaatcagaaccag
cagggacagcaagccgatccactagtggcagccgcagcagtgaactctgcccttgcattt
ggacagggactggctgcaggcatgccaggttatccagtcttggctcccgctgcttactat
gaccaaaccggtgcccttgtggtgaatgcaggagcgaggaatggtcttggagctcctgtt
cgacttgtagctcctgccccagtcatcattagttcctcagctgcacaagcagctgttgca
gcggccgcagcttcagcaaatggagcagccggtggtcttgctggaacaacaaatggacca
tttcgccctttaggaactcagcagccccagccccagccccagcagcagcccagtaacaac
ctggcatctagctctttctacggcaacaactctctgagcagcaattcacagagcagctcc
ctcttctcccagggctccgcccagcctgccaacacatccttgggatttggaagtagcagt
tctctcggcgccaccctgggatcagcccttggagggtttggaacagcagttgcaaactcc
aacactggcagtggctcccgccgtgactccctgactggcagcagtgacctttataagagg
acatcgagcagcttgacccccattggacacagtttttataacggccttagcttttcctcc
tctcctggacccgtgggcatgcctctccctagtcagggaccaggacattcacagacacca
cctccttccctctcttcacatggatcctcttcaagcttaaacctgggaggactcacaaac
ggcagtggaagatacatctctgctgctccaggcgctgaagccaagtaccgcagcgcaagc
agtgcctccagcctcttcagccccagcagcacccttttttcctcctcccgtttgcgatat
ggaatgtctgatgtcatgccctctggcaggagcaggcttttggaagattttcgaaataac
cgatatcccaatttacaattgcgggagattgctgggcacataatggagttttcccaagac
cagcatggttccagattcattcagctgaaacttgagcgtgccacaccagccgaacgccaa
cttgtcttcaatgaaatcctgcaggccgcttaccagctgatggtggatgtatttggaaat
tacgtcattcagaagttctttgaatttggcagccttgaacagaagctggctttggctgag
cggattcgaggccacgtcctgtcattggcattgcagatgtatggctgccgtgttatccag
aaagctcttgagttcattccctcagaccagcaggtaattaatgaaatggttcgggaactg
gatggccacgtcctcaagtgtgtgaaagaccagaatggcaatcacgtggtgcagaagtgc
atcgaatgtgtgcagccccagtctctgcagtttatcatcgatgcgtttaaggggcaggtg
tttgctttgtccacgcatccttatggctgccgagtgattcagaggatcctggagcactgt
ctccccgaccagacactccctattttagaggagcttcaccagcacacagagcaacttgta
caggatcaatatggaaattacgtaatccagcatgtattggagcatggtcgtcctgaggat
aaaagtaaaattgtagcagaaattcgaggcaatgtacttgtgttgagtcagcacaaattt
gcaagcaacgttgtggagaagtgtgtcactcacgcctcccgtacagagcgcgctgtgctt
atcgacgaggtgtgcaccatgaacgatggtccccacagtgccttatacaccatgatgaag
gaccagtatgccaactacgtggtccagaagatgatcgatgtggcagagccagctcagagg
aagatcgtcatgcacaagatccggccccacatcgcgactcttcgcaagtacacttacggc
aagcacatcctggccaagctggagaaatactacatgaagaatggcgttgacttggggccc
atctgtggcccccctaatggtatcatctga
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integrated database retrieval system