Capra hircus (goat): 102172305
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Entry
102172305 CDS
T02910
Name
(RefSeq) stabilin-1
KO
K19020
stabilin-1
Organism
chx
Capra hircus (goat)
Pathway
chx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102172305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
chx00536
]
102172305
Glycosaminoglycan binding proteins [BR:
chx00536
]
Hyaluronan
Cell surface receptors
102172305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
EGF_STAB1-2
cEGF
FXa_inhibition
EGF_MSP1_1
EGF_Teneurin
EGF_TEN
EGF
Motif
Other DBs
NCBI-GeneID:
102172305
NCBI-ProteinID:
XP_017922227
LinkDB
All DBs
Position
22:complement(48453789..48470182)
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AA seq
1520 aa
AA seq
DB search
MAGPRGHLLLCFLALCLAGPSFFGEQKVRSKRCDVKTKFVTHMPCTPCPAIRKRACPLGW
TRTFPGKISQDCRYEVQLGDSLLSMSGCSLECWKDMVQKACCPGYWGSQCYECPGGAETP
CSGHGTCLDGIEGNGTCVCQENFGGSACQECRDPNRFGPDCQSVCRCVYGVCRHGPRGDG
SCLCFAGYTGAHCDHELLACQALNCPRNSQCSEEAPSCSCLPGYTQQGHECRASDPCRPS
PCSPLAQCSVGPSGQAQCRCPENYYGDGTVCLPQDPCTTNNGGCPSNSTLCLYRRPGQAS
CLCKPGLVSIAHDSSAGCFAHCSAFSCDRSATCQVTPDGKTSCVCKEGEVGDGRACYGHL
LHEVQKASQTSMLLRLRVAFAMLDQGCREILSTSGPFTVLAPLVSSRTMNASVAQQLCRQ
HIIAGQHMLEEAGTQAPRRWWTLAGQEITVSFSRFRKYTYKYQDQPQQTFTIHKANYPAA
NGLFHVVTALRLQPPPELPEDPKRTIGQILASNEVFTRFETILENCGLPSFLDGPGPFTV
FAPSNEAVDGLRDGRLVYLFTAGLSKLQELVRYHVYNHGQLTVEKLISKGRVLTMANQIL
AVNISEEGRILLGPEGVPLRRVDVLAANGVIHMLEGILLPPTILPILPKLCNEEQHAVVA
GSCVDCQALNTSTCPPNSVKLDISPEECVYIHDPTGLNVLKKGCAHYCNQTIQKPGCCKG
FFGPDCLQCPGGFSNPCYGKGNCSDGVQGSGACLCFPDYKGIACHICSNPNKHGEQCQED
CGCVHGLCDNRPGSGGVCQRGTCAPGFSGRFCNESTVSCGSTEQAQQCHPHARCVNQGGV
SRCLCLDAFEGDGFSCTPSDPCSRPDRGGCSENAECVPGARGAHHCTCHKGWSGDGRVCV
AIDECELDSRGSCHADALCSYVGPGQSRCTCKLGFAGDGYMCSPIDPCRAGNGGCHDLAT
CRAVGGGQRVCTCPPGYGGDGFSCYGDILKELEANAHFSVFYQWVKRAGITFPADSRVTA
LVPSESAIRRLSSKDQAFWLQPRLLPQLVRAHFLQGALSEEELARLHGQNVSTLNPTVRW
EIHNVSGRVWVQNASVDVADLLATNGVLHVLSQVLLPPRGDVPGGQGLLQQLDSVPAFHL
FRELLQRHRLVPQIEAATAYTIFVPTNRSLEAQANSSSLDLDVVRHHVILGEALSTEALG
KGGHRSSLLGPAHWLVFYNHSGQPEVNHVPLEGPVLQAPGRSLFGLSGVLTVGSSRCLHS
HAEALREKCVNCSRKFRCTQGYQLEDTPRKSCVYRSGYTFSRGCSYTCAKKIQVPDCCPG
FFGTLCEPCPGGLGGVCSGHGQCQDRLLGSGECRCHEGFHGMACEMCELGRYGPNCTGVC
DCAHGLCQEGLRGDGSCICNVGWQGLRCDQKISGPQCLQKCDPNANCVQDSAATPACVCA
AGYSGDGVSCSAVDPCARDHGGCSPHANCTTVAPGQRTCTCLDGYTGDGELCQEANSCLI
RHGGCHMHAECIPTGPQQPR
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atggcagggccccgtggccacctcctgctctgcttcctggctctctgcttggcaggcccc
agcttctttggggagcagaaggtccggtccaaacgctgcgacgtgaagaccaagttcgtc
actcacatgccctgcaccccgtgccccgccatcaggaagcgagcgtgccccttgggctgg
acccgcaccttcccggggaagatctcgcaggactgccgatacgaggtccagctgggggac
tctctgttgtccatgagtggctgcagcctggagtgctggaaggacatggtgcagaaggcc
tgctgccctggctactgggggtcccagtgctacgagtgccccggcggtgctgagacccca
tgcagcggccacgggacctgcctggatggcatagaagggaatgggacctgtgtgtgccag
gagaactttggtggctcagcctgccaggagtgtcgggaccccaaccggtttgggcctgac
tgccagtcagtgtgcagatgtgtatatggcgtgtgccgccatgggccgcgcggggatgga
agctgcctgtgcttcgctggatacactggagcccactgtgaccacgagctgcttgcctgc
caggccctgaactgtcctcggaactcccagtgctctgaagaggccccctcctgcagctgc
ctgcctggctacacccagcagggtcacgagtgccgggcctccgacccctgccggccgtca
ccctgctccccactggcccagtgctctgtaggccccagcgggcaggcccagtgtcgctgc
cctgagaactactacggggatgggacggtgtgtctgccccaggacccgtgcaccaccaac
aatggcggctgccccagcaactccaccttgtgtctatacaggaggccaggccaggcctcc
tgcttatgtaagccaggcctggtcagcattgcccacgacagctccgcgggctgcttcgcc
cactgctccgccttctcctgcgaccgctcagccacgtgccaggtgaccccggatggaaag
accagctgtgtgtgcaaagagggcgaggtgggggacgggcgcgcctgctatggacacctg
ctccacgaggttcagaaggccagccagacgagcatgttactgcggctgagagtcgccttt
gccatgctggaccaggggtgccgggagatcctcagcacgtcgggcccgttcactgtgttg
gcaccgcttgtctcctccaggaccatgaacgcatctgtcgcccagcagctgtgcagacag
cacatcatcgccggccagcacatgctggaggaggcggggacccaggctccacgccgctgg
tggacgctggccgggcaggagatcactgtcagtttcagccggttcaggaaatacacctac
aaataccaagaccagccgcagcagacattcaccatccacaaggctaactacccagcggcc
aacggcctcttccatgtcgtcactgccctgaggttgcagcccccaccggagctccctgag
gatcccaagaggaccatcggccagatccttgcctccaatgaggtgttcacccggtttgaa
accatcctggagaactgcgggctgccctccttcttggatgggcccgggcccttcacagtc
tttgcccccagcaacgaggcagtggatggcttgcgggatggccgcctggtctacctcttc
acggcgggtctctccaaactgcaggaactggtgaggtaccacgtctacaaccatggccag
ctgactgttgagaagctcatctccaagggtcgggtgctcaccatggcaaaccagatcctg
gctgtgaatatctcagaggaggggcgcatcctgctggggcctgagggggtccccctgcgg
agagtggacgtgctggctgccaacggtgtgatccacatgctggagggcatcctgctaccc
ccgaccatcctgcccatcctgcccaagctctgcaacgaggagcagcacgcggtcgtggcg
ggctcctgtgtggactgccaagccctgaacaccagcacgtgccctcccaacagcgtgaag
ctggacatctctcctgaggagtgtgtctatatccacgaccctactgggctcaacgtcctg
aagaagggctgtgcccactactgcaaccagaccatccagaaacctggctgctgcaaaggg
ttttttgggcctgactgtttacagtgtcctgggggcttttccaacccctgctacggcaaa
ggcaactgcagtgatggggtccagggcagtggggcctgcctctgcttcccagactacaag
gggatcgcctgccacatctgctccaacccgaacaagcatggagagcagtgccaggaagac
tgcggttgtgtccacggtctatgtgacaaccgtccgggcagtgggggggtatgccagcgt
ggcacgtgtgccccaggcttcagcggccgcttctgcaacgagtccacagtgagctgtggg
tccacggagcaggcccagcagtgccacccacatgcccgctgcgttaaccaggggggtgtc
tccaggtgtctctgtctggatgcctttgagggtgatggattctcctgcacacccagcgac
ccctgctcccgcccagaccgtggcgggtgctcggagaacgctgagtgtgtccctggggcc
cggggcgcccaccactgcacatgccacaagggctggagtggggatggtcgtgtctgcgtg
gccatcgacgagtgtgagttggactcgcgaggcagctgccatgctgacgccctctgcagc
tatgtggggcctgggcagagccggtgcacctgcaagctgggcttcgcgggagacggctac
atgtgcagtcccattgacccctgccgggcgggcaatgggggatgccatgatctggccacc
tgccgggcagtggggggaggccagcgggtctgcacgtgtcctcctggctatgggggtgat
ggcttcagctgctacggagacatcctcaaggagctggaggcaaatgcccacttctccgtc
ttctaccagtgggtcaagagggccggcatcacttttcctgccgacagccgagtcacagcc
ctggtgccctcggagtctgccatccgccggctgagcagcaaggaccaggccttctggctt
cagccaaggctgctgccgcagctggtcagggcccattttctccagggcgccctgtccgag
gaggagctggcccggctgcacgggcagaatgtatcaaccctgaaccccaccgtacgctgg
gagattcacaacgtcagtgggagggtctgggtgcaaaacgccagcgtggacgtggctgac
ctccttgccaccaatggtgtcctccatgtcctcagccaggtcttactgcctccaagaggg
gatgtgccgggggggcaggggctgctgcagcagctggactcggtacctgccttccacctc
ttccgggagctgctgcagcgccacaggctggttccccagattgaggctgccaccgcctac
accatcttcgtgccaaccaaccgctctctggaggcccaggccaacagcagcagcctggac
ttggatgttgtgcgacaccacgtgatcctgggcgaggcgctctccacagaggccctgggc
aagggggggcaccgcagctccctcctggggcccgcccactggcttgtcttctacaaccac
agtggccagcctgaggtgaaccacgtgccgctggaaggccctgtgctgcaggcccctggc
cgttcactcttcggcctgtcgggggtcctgacagtgggctcaagccgctgcctgcacagc
cacgcagaggccctgcgggagaagtgtgtgaactgtagccggaaattccgctgcactcag
ggctaccagctggaggacacccccaggaagagctgtgtctacaggtctggctacaccttc
tcccggggctgttcgtacacgtgtgccaagaagatccaggtgcctgactgctgccctggc
ttcttcggcaccctgtgcgagccgtgcccggggggtctgggcggcgtgtgctcgggccac
gggcagtgccaggaccggctcctgggcagcggggagtgccgctgccacgagggcttccac
gggatggcctgtgagatgtgcgagctgggccgctacgggcccaactgcactggagtgtgt
gactgcgcccacgggctgtgccaggagggcctccgcggggacggaagctgcatctgcaac
gtgggttggcagggcctccgctgtgaccagaaaatcagtggccctcagtgcctgcagaag
tgcgaccccaatgccaactgcgtgcaggactcggctgcaacccctgcctgcgtctgtgcc
gcggggtactcgggcgacggtgtctcctgttcagcggtggacccgtgcgcgcgtgaccat
ggcggctgctccccccacgccaactgcacaaccgtggcacctggtcagcggacgtgcacc
tgcctggacggctacacgggcgacggggagctgtgccaggaagccaacagctgtctcatc
cgccatgggggctgccacatgcatgccgagtgtatccccacaggcccccagcagccccgc
tga
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