Capra hircus (goat): 102172632
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Entry
102172632 CDS
T02910
Name
(RefSeq) E3 SUMO-protein ligase RanBP2 isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
chx
Capra hircus (goat)
Pathway
chx03013
Nucleocytoplasmic transport
chx03250
Viral life cycle - HIV-1
chx05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102172632
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102172632
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102172632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102172632
03110 Chaperones and folding catalysts [BR:
chx03110
]
102172632
04121 Ubiquitin system [BR:
chx04121
]
102172632
Messenger RNA biogenesis [BR:
chx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102172632
Chaperones and folding catalysts [BR:
chx03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
102172632
Ubiquitin system [BR:
chx04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
102172632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Pro_isomerase
Zn_ribbon_RanBP
WH1
TPR_1
TPR_2
TPR_14
ARM_TT21_C
TPR_8
TPR_16
TPR_CcmH_CycH
ANC1_spectrin
TPR_11
Motif
Other DBs
NCBI-GeneID:
102172632
NCBI-ProteinID:
XP_017910789
LinkDB
All DBs
Position
11:complement(44247530..44305841)
Genome browser
AA seq
3056 aa
AA seq
DB search
MRRSKADVERYIASVQGSAPSPREKSMKGFYFAKLYYEAKEYDLAKKYISTYINVQERDP
KAHRFLGLLYEVEENIEKAVECYKRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVER
AAKLFPGSPAIYKLKEQLLDCKGEDGWNKLFDLIQSELYARPDDVHVNIRLVELYRSNSR
LRDAVAHCHQAERNTALRSSLEWNSCVVQTLKEYLESSQCLESDKSNWRATSQDLLIAYA
NLMLLTLSIRDAQESRELLESFDSTLQSVKSCSGGNEELSATFLEVRGHFYMHAGSLLLK
MGQHSDVQWRALSELAALCYLIAFQVPRPKTKLIKGEAGQSLLEMMAYDRLSQSGHMLVN
LSRDKQDFLKEVVESFANRSGQSALYDALFSRQLPKDSSFLGSDDIGSIDVQEPDPDELA
RYDVGAIRAHNGSLQHLTWLGLQWDSLPTLPAIRKWLKQLFHHLPQETSRLETNAPESIC
ILDLEVFLLGVIYTSHLQLKEKSNSHCSFYQPLCLPLPVCKQLCTERQKAWWDAVCNLIH
RKAVPGTSAKLRLLVQRDINTLRGQEKTGLQPALLVHWAKCLQKTGSGLNSFYDQREYIG
RSVHYWKKVLPLLKMIKKKSSIPEPADPLFRHFHSADIQACEVGEYEDEAHITFAILDVV
NGNIDDAMATFESINNVTSYWNLALLFHRKAEDIDNDVLSSEEQEECKNYLRKTRDYLIK
ILDDCDSNLSVVKKLPVPLESVKEMLNLVMQELDEFSEGAPLHKNGSLRNADSEIKHSTS
SPTKYSPSPNRSCKYSPKTPPQWAEDQNCLLKMICQQVEAIKKEMQELKLNSSSSGSPHR
WPPENYGPDPVPDSYQGSQNFHGAPLTVATTGHSVCYSQSPAYNTQYLLRPAANVTPTKG
PVYGMNRLPPQQHVYGYPQQMHTPPVQSSSACMFSQDMYGPPLRFESPATGILSPRGDDY
FNYNVQQTSTNPPLPEPGYFTKPPLAAHASRSAEPKVLEFGKTSFVQPVPGEGMRPSLAA
PAHTTQPTPFKFNSNFKSNDGDFTFSSPQVVAQPPAATYNNNESLLGLLTSDKPLQGDGY
SGPKAVQNMGPRNTFNFGSKNVPGISFTENMSTNQPKNSGFRRNDDMFTFYSPGKSVFGV
PATESASKGHDADGGSAQGDEEDDGPHFEPVVPLPDKIEVRTGEEDEEEFFCNRAKLYRF
DAASREWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDMALAPNAGSDRSF
VWYAVDYADESPKPEQLAIRFKTPEEAALFKCKFEEAQSLLKASGGNIATTTHQATKTVK
EPTGHDSKDIDKSDGVTMNFEFQVAKKEGSWWHCNICSLKNMATAKKCVSCQNLNPGSKE
LLGPPLVDTVSAPKPGSDPSRSALVTLKKEGHWNCGVCLVRNEPTVSRCIACQNKKPGSK
SESPLIKQPSFKFGQGDLPKAASSDFKSVFSVKEGQWDCSVCLIGNEGSSVKCEACQTPR
KQSSPAFAAPAPASLKFGTSETSKAPKSGFEGVFSKKEGQWDCSVQNEASMAECVACQNS
GQNPPASAASASASSETGKAPKSGLEGLFAKKEGQWDCDVCLIRNEGSSPKCVACGASNP
TQNPAAEAPLTFPVGSAADASNSCASQTGTGFKSNFSEKAFKFGNAEQGFKFGHVDQENA
PSFKFQSSSSTDSKSAKEGFSFSFPASAGGFKFGIQETENQEKTAEKSFEEDTDDQAQDT
GGQKDGNTVVFGQTGSTFTFADLAKSNSGEGFQFGKKDPNFKGFSGAGEKLFSSQSSKLV
DKADACADLEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDA
EISQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMHLKPLSGSDRAWMW
LASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEECQRLLLDIPLQTPHKLVDTGRAAKLI
QRAEEMKSGLKDFKTFLTNDQTKVSDEESKDSRAGAATAADMSGAPNTETTGPTLEWDNY
DLREDALDDSVSSSSVHASPLASSPVRKNLFRFGESTTGFNFSFKSALSPSKSPGKLNQS
GASVGTDEDSDVTQEEERDGQHFEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRYDKDAG
QWKERGIGDIKILQNYENKQVRIVMRRDQVLKLCANHRITPDMTLQNMKGTERVWVWTAC
DFADGERKIEHLAVRFKLQDVADSFKKIFDEAKVAQEKDFLITPHVARSTTPRESPCGKM
AVAVLEETTRERTDLPQGGDAADTASEVGGVSGTPETATKAVVSPPKFVFGSESVKSIFS
SEKSKPFAFGNSSATGSLFGFSFNTPLKNNSSEASSAVQSGSERKVEPSGRQESQNSDPK
SASDGKVKNTSSAFLKEQFSTSQTFKTPEKGFNFSLFKSNPMAFWTSTPSSQPENGVEER
EKPEDLPSDDDVLIVYELTPTPEQRALASRLQLPPTFFCYKNRPDYISEEEEDDEDFDTA
VKKLNGKLYLDDSETCRLSEENLTDNEKECVIVWEKKPTVEEKAKADTLKLPPTFFCGVC
SDTDEDNGNAEDFQSELQKVQEAQKSQEENIGSSADGMCTDDTKVTAPFFCKSEEPEFTT
KSVSSPSVSSGAVDKPVDLSTRKENDADSTSQVESKTVTFGFGSGTGLSFADLASSNSGD
FAFGSKDKNFQWANTGAAVFGAQSTGKVGEDEDGSDEEVVHNEDIHFEPIVSLPEVEVKS
GEEDEEILFKERAKLYRWDREASQWKERGVGDMKILWHTVKNYFRILMRRDQVFKVCANH
VITKTMELKPLNVSNNALVWTASDYADGEAKVEQLAVRFKTKEMADCFKKKFEECQQNLL
KPQKSLTAEFSNETNPVVFFDICADDEPLGRITMELFSNIVPKTAENFRALCTGEKGFGF
KSSIFHRVIPDFVCQGGDITKHDGTGGRSIYGDKFEDENFNVKHTGPGLLSMANRGQDTN
NSQFFITLKKAERLDFKHVVFGFVKDGMDTVKKIESFGSPKGSVSRRIIITECGQI
NT seq
9171 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcagcaaggccgacgtggagcgatacatcgcttcggtgcagggctctgccccg
tcaccccgggagaagtcaatgaaaggattctattttgcaaagctgtattatgaagctaaa
gaatatgatcttgctaaaaaatatatatctacatatattaatgtgcaagaaagggatccc
aaagctcacagatttctcggtcttctttacgaagtagaggaaaacatagagaaagctgtt
gaatgttacaagcgttcagtggagttaaacccaacacagaaagatcttgtgttgaagatt
gcagaattgctctgtaaaaatgatgttactgatggaagagctaaatactgggttgaacga
gcagctaaactttttccaggaagtcctgcaatttataaactaaaggaacagcttttagat
tgtaaaggtgaagatggatggaataaacttttcgacttgattcaatcagaactttatgca
aggcctgatgatgtacacgtgaacatccgactggtggagctatatcgctccaacagcagg
ctgagggatgctgtggcccactgccaccaggcagagaggaacacagctctgcgctcaagt
ttagagtggaattcctgtgtagtacagacccttaaggaatacctggaatcttcacagtgt
ttggagtctgataaaagtaactggagagcaaccagtcaggacttacttatagcctatgct
aacctgatgcttctcacgctgtccataagagatgctcaggagagcagagaattactggag
agttttgatagcactcttcagtctgtgaagtcttgttcaggtggaaatgaggagctctca
gccacgttcctggaagtgagaggacatttctacatgcacgccggttcgctgctgctaaag
atgggccagcacagtgacgtgcagtggcgcgcgctctcagagctggctgcgctctgctat
ctcatagccttccaggttccaagaccaaagactaaattaataaaaggagaagctggacaa
agtctattggaaatgatggcctatgatcgtctgagccaatcagggcatatgctggtaaac
ttaagtcgtgacaagcaagactttttaaaagaggttgtagaatcctttgccaacaggagt
gggcagtcagctttgtacgatgctctgttttctcgtcagttacctaaggacagctctttc
cttggtagtgatgatattggaagtattgatgtacaagaaccagatcctgatgaattggct
agatatgatgttggtgccattcgggcacataatggcagtcttcaacacctcacctggctt
ggcttacagtgggattcattacctaccttacctgcaattcgaaaatggctaaaacagctt
tttcatcatttgccccaggaaacctcaagacttgaaacaaatgcacctgaatcaatatgt
attttagatcttgaagtatttcttcttggagtaatatataccagccacttacagttaaag
gaaaagtctaattctcactgcagcttctatcagcctctgtgcttgccactgcctgtgtgt
aagcagctttgcacagaaaggcagaaagcatggtgggatgcagtttgtaatctgattcat
agaaaagcagtacctgggacttcagcaaaattgcgacttctagtacagcgtgacataaac
actctacgaggccaggaaaaaactggccttcagcctgctctgctcgtgcactgggcaaag
tgccttcagaaaacgggcagtggtcttaattctttttatgatcaacgagaatacataggc
agaagtgttcactactggaaaaaggttttgccattgttgaagatgatcaagaagaagagc
agcatccctgaacctgctgatcctctgttcaggcatttccatagtgcagacattcaggca
tgtgaagttggtgaatacgaagatgaagcacacatcacattcgctatattggatgtagtt
aatggaaatatagatgatgctatggctacgtttgaatctattaataacgtcacttcttat
tggaatcttgcactgctttttcacagaaaagcagaagacattgataatgatgtgctttct
tctgaagaacaagaagaatgcaaaaattacctgagaaagaccagggactacctgataaag
attttagatgactgtgattcaaatctgtcagtagttaagaaattgcctgtgcccctggaa
tctgtgaaagagatgcttaatttagtcatgcaggagctcgatgagttcagtgaaggagcg
cctcttcataaaaatgggtctttacgaaacgcagattcagaaataaagcactcaacttca
tctcccaccaaatactctccatcaccaaatagaagttgtaagtattctcccaaaacacca
cctcagtgggcagaagatcaaaattgcttattgaaaatgatctgccaacaagtggaggcc
attaagaaagaaatgcaggagttgaaactaaacagcagtagctcagggtcccctcaccgt
tggcctccagagaattatggaccagacccagtgcctgatagttatcaggggtcacagaat
tttcacggggccccactgacagttgcaactactgggcattcagtatgttatagtcagtca
ccagcatataatactcagtatctactcagaccagcagctaatgttactcccacaaagggg
ccagtttatggcatgaacaggcttccacctcagcagcacgtctacggctacccccagcag
atgcacacgccgcccgtgcagagctcatcagcgtgcatgttctctcaagacatgtatggt
cccccattgcgttttgagtctcctgcgacaggaattctatcacccaggggcgatgattac
tttaattacaatgttcaacagacaagcacaaatccacctttgccagaaccaggttatttt
acaaaacctccacttgcagcacatgcttcaagatctgcagaacctaaggttttagaattt
ggaaaaaccagttttgttcagccagtgcctggtgaaggaatgaggccatctctggcagca
cctgcacatacaacacagccgactcctttcaaatttaattcaaatttcaagtcaaatgat
ggtgacttcacgttttcctcaccacaggttgtggcgcagccccctgctgcgacttacaac
aataatgaaagcctcttaggtctgctgacttcagataaacctttgcagggagatgggtac
agtggaccaaaagctgttcaaaacatgggacctcgaaatacgtttaattttggaagcaaa
aatgtgcctggaatttcatttactgagaacatgagtacaaatcagccaaagaattctggt
tttcgacgtaatgatgatatgtttactttctacagcccagggaaatcagtgttcggagtg
cctgctacagagtcggccagcaagggtcacgatgctgatgggggaagtgcacagggggat
gaggaggacgacggccctcactttgagcccgtggtgcctcttcctgacaagatcgaagtg
aggactggcgaggaggatgaggaggagttcttctgcaatcgtgccaagttgtatcgcttc
gatgcagcatcccgagaatggaaggagcgtggaatcggcaatgttaagatcctcaggcac
aaaacctccggtaaaatccgcctgctcatgagacgtgagcaggtgctaaagatctgtgca
aatcactatattagcccagacatggcccttgcccctaacgccggttcagacagatccttc
gtgtggtatgctgtggactacgccgacgagtcgcccaaaccagagcagctggccattagg
ttcaagacgcctgaggaggcagcccttttcaagtgcaagtttgaagaggcccagagcctg
ttgaaagcctcaggaggaaatatagccacaaccacccatcaggccacaaaaactgtaaaa
gaacccacaggtcatgacagtaaggatattgacaaatctgatggtgtaactatgaatttt
gaatttcaggttgcaaagaaagaagggtcttggtggcattgtaacatctgctcactgaag
aacatggcaactgccaagaagtgtgtatcctgccagaatctaaacccaggcagtaaggag
ctcctcggcccaccattagttgatactgtctccgctcctaaacctggctcggatcccagt
agatctgcgctggtgactctaaagaaggaaggtcactggaactgtggtgtttgtttagta
agaaatgaacccactgtgtctcgatgcattgcttgtcagaataaaaagcctggtagcaaa
agtgaatctccacttattaagcaaccttcctttaaatttggccagggagatcttcctaag
gctgccagcagtgatttcaaatctgttttttcagtaaaggagggacagtgggattgcagt
gtttgcttgataggaaatgaaggaagttctgtgaaatgtgaggcttgtcagactccacgg
aaacagagttcacctgcctttgctgccccagcacctgcctcattaaaatttggtacttca
gagacaagcaaggctccaaagagtggatttgaaggtgttttctccaagaaggaaggacag
tgggattgctcagtgcaaaatgaggccagtatggccgagtgtgtggcctgtcagaactca
ggtcaaaatccgccagcttctgctgcatcggcgtctgcttcttcggagacaggcaaggct
ccaaagagtggacttgaggggctgttcgccaagaaggagggacagtgggattgtgatgtc
tgcttgatacgaaatgaaggaagttctccaaaatgtgtggcttgtggtgcctctaaccca
acccagaaccctgctgctgaagctcctctcactttccctgtgggctctgcagctgacgca
agtaactcgtgtgcaagtcagacaggaacaggatttaagagtaacttttcagaaaaagcc
tttaagtttggcaatgcagaacagggatttaaatttgggcacgtggatcaggaaaatgca
ccttcgtttaagtttcagagttcttctagtacagactctaaatcagcaaaggaaggattt
agtttttctttccctgcatctgctggtggatttaagtttggcattcaggagacagaaaat
caggaaaagactgctgaaaagtcctttgaagaggacactgatgatcaggctcaggacact
ggtggtcagaaagacgggaatactgtggtctttggtcagactggcagcactttcaccttt
gcagatcttgccaagtcaaattcaggagaagggtttcagtttggcaaaaaagaccccaat
ttcaagggattttcaggtgctggagagaagttattctcatcacaaagtagtaaactagtt
gataaagcagatgcttgtgctgaccttgagaaagatgatgatgcctataagactgaggac
agtgacgacatccattttgaaccagtcgtccagatgcctgaaaaagtggagctggtcaca
ggagaggaagatgagaaagttctttactcacagcgggtgaaattatttaggtttgatgct
gagataagtcagtggaaagaaaggggcttggggaacttaaaaatcctcaaaaatgaagtc
aacggcaaactgaggatgctgatgcggagagaacaggtgctaaaggtgtgtgccaaccac
tggatcaccaccaccatgcacctgaagcccctctcgggctcagacagggcttggatgtgg
ttagccagtgacttttctgatggcgatgccaaactcgagcagctggcggcaaaattcaag
acacctgaactggctgaagaattcaagcagaaatttgaggaatgccagcgacttctgtta
gacattcccctgcagactccccataagcttgtggatactggcagggctgccaagttaata
cagagggcagaagaaatgaagagtgggctaaaagatttcaagacatttttgacgaatgat
cagacaaaagtcagtgatgaagagagtaaagattccagagcaggagctgccactgctgca
gatatgagtggcgcaccaaacactgagaccactgggcccaccctggagtgggacaactat
gacctcagggaggatgccctggatgacagcgtaagcagcagctctgtgcatgcctccccg
ctggccagcagccccgtaaggaaaaacctcttccgcttcggcgagtcgaccaccggcttt
aacttcagtttcaagtctgctctgagcccgtccaagtcccctggcaaattgaatcagagt
ggggcctcagtgggcacagacgaagactccgatgtcactcaggaagaggagagagacgga
cagcacttcgagcctgttgtccctttgcctgatctagtcgaggtgtccagtggggaggaa
aatgaacaagtcgtttttagtcacagagccaaactctacaggtatgataaagatgctggt
cagtggaaagaaagaggcatcggcgatataaagattttacagaattatgaaaacaagcaa
gttcgtatagtgatgagaagggaccaggtattaaaactttgtgccaaccacagaataact
ccagacatgactttgcaaaatatgaaaggtaccgaaagagtgtgggtgtggactgcatgt
gattttgcagatggagaaagaaaaatagaacatttagctgttcgttttaaactacaggat
gttgcagactcatttaagaaaatatttgatgaagcaaaagtggcccaagaaaaagatttt
ttgataacacctcacgtcgctcgttcaaccactcccagggagtcaccttgtggaaaaatg
gctgttgctgtgctggaagaaaccaccagagaacgaactgatttgcctcagggtggtgat
gcagcagacacagcctcggaagttggcggggtgtctggcacccctgaaacagcaacaaaa
gccgtggtttcacccccaaagtttgtatttggttctgagtctgttaaaagcatttttagc
agtgaaaagtcaaaaccatttgcatttggcaacagttcagctactggatctttgtttgga
tttagttttaacacacctctgaaaaataacagtagtgaagccagttcagcagtccagagt
ggatctgagagaaaagtggaacctagtggtcgccaggagtcacagaactctgatcccaaa
tcagcttccgatggcaaagtcaaaaacacctcttctgcttttctgaaggagcagttctca
accagccagacgtttaaaactccagaaaagggatttaattttagcctttttaaatctaat
ccaatggctttttggaccagcaccccttcctcacagcctgagaacggagtggaagagagg
gaaaaacctgaggatcttccctctgatgatgatgttctcattgtgtatgagctaaccccg
acccctgagcaaagagctcttgcaagcagacttcaacttccccctacatttttctgctat
aagaacaggccagactacatcagtgaagaggaggaggacgatgaagatttcgacacagct
gtcaagaaactcaatgggaaactgtatctggatgactcagaaacatgtagactgtcagaa
gaaaatctaacagataatgagaaagaatgtgttattgtttgggaaaagaagccaacagtt
gaagagaaggcaaaagcagacactctgaagcttccacctacgtttttttgtggcgtctgc
agtgacactgatgaggacaatggaaatgcagaagactttcagtcggagcttcagaaagtg
caggaggcgcaaaaatcccaggaagagaacataggtagctcagctgatggcatgtgtaca
gatgacactaaagtgactgcgccatttttctgtaaatctgaagagccagagtttactacc
aaatctgttagttcaccatcagtttcttctggagctgttgacaaacctgtggatttatct
actagaaaggaaaatgatgcagattctacaagccaagtagaaagcaaaacagttactttt
ggatttggaagtggcacagggctgtcatttgcggacttggcttccagtaactctggggat
tttgcttttggatccaaagataaaaatttccagtgggcaaatactggagcagcagtgttt
ggagcacagtcaaccggtaaagttggcgaagatgaagatggtagtgatgaagaggtagtt
cataatgaagatatccattttgaaccaatagtgtcactaccagaggtagaagtaaaatct
ggagaagaagatgaagaaattttatttaaagagagagccaaactttacaggtgggatcga
gaggccagtcagtggaaggagcgtggcgttggagacatgaagatcctctggcacacggtg
aagaattactttcggattctgatgaggagagaccaggtgttcaaagtgtgtgcgaaccac
gtcatcaccaagacgatggaactgaaacccttgaatgtttccaacaatgctttagtttgg
actgcctcagattatgctgatggagaagccaaagtggaacagcttgcagtgagatttaaa
actaaagaaatggctgattgtttcaagaaaaaatttgaagaatgtcaacagaatttattg
aaaccccagaaatcactgacagcagagttctcaaacgagacaaatcctgtggtgtttttt
gacatttgtgcagatgatgagcccctgggacgcataaccatggaattattttcaaacatt
gttcctaaaactgctgagaacttcagagcactgtgcactggagagaagggctttggtttc
aagagctccatattccacagagtgattccagattttgtttgccaagggggagatatcaca
aaacatgatggaacaggaggacggtccatttatggagataaatttgaagatgaaaatttt
aatgtgaaacatacaggtcctggtttactatcaatggccaatcgaggccaggacaccaat
aattctcagtttttcataacactgaaaaaagcagaacgtttggactttaagcatgtagta
tttgggtttgttaaagatggtatggatactgtgaaaaagattgagtcatttggttctcct
aaagggtctgttagtcgaagaattattatcacagaatgtggacagatataa
DBGET
integrated database retrieval system
