Capra hircus (goat): 102172748
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Entry
102172748 CDS
T02910
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
chx
Capra hircus (goat)
Pathway
chx04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102172748 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chx04131
]
102172748 (VPS35)
Membrane trafficking [BR:
chx04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
102172748 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
KH_GLD-3_1st
Imm5
FerA
Motif
Other DBs
NCBI-GeneID:
102172748
NCBI-ProteinID:
XP_005692003
UniProt:
A0A452G510
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Position
18:22271152..22300390
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AA seq
796 aa
AA seq
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MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPTDIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPVEEPD
PEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLIL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaacacagcagtcaccgcaggatgagcaggaaaaactcctggatgaagccata
caggctgtgaaggtccagtcattccagatgaagagatgcctggacaaaaacaagcttatg
gatgctctgaaacatgcttctaatatgcttggtgaactgcggacttctatgttatcacca
aagagctactatgaactttatatggctatttctgatgaactgcactacctggaagtttac
ctgacagatgaatttgctaaaggaagaaaagtggcagatctctatgagcttgtacagtat
gctggaaacatcatcccaaggctttatctgttgatcacagttggagttgtatatgtcaag
tcatttcctcagtccaggaaagatattttgaaagatttggtagaaatgtgccgtggtgtg
cagcatcccttgagaggtctatttcttcgaaattatctacttcagtgtaccagaaacatc
ttacctgatgaaggggagccaacagatgaagaaacaactggtgatatcagtgattccatg
gattttgtcctactcaactttgcagaaatgaacaagctctgggttcgaatgcagcatcag
ggacatagccgagatagagaaaaaagagaacgagaaagacaagaactgagaattttagtg
ggaacaaatttggtgcgccttagtcagttggaaggtgtaaatgtggaacgttacaaacag
attgttttgaccggcatattagagcaagtggtgaattgcagagatgctttggctcaggaa
tatctcatggagtgcattattcaggttttccctgatgaattccaccttcaaactttgaat
ccttttcttcgggcctgtgctgagttacaccaaaatgtaaatgtgaaaaacataatcatt
gctttaattgatagattagctttatttgctcaccgtgaagatggacctgggatcccaaca
gatattaaactttttgacatattttcacagcaggtggctacggtaatacagtctagacaa
gacatgccttcggaggatgttgtatctttacaagtctctctcattaatctcgctatgaag
tgttatcctgatcgtgtggactatgttgataaagttctagaaacaacagtggagatattt
aataagctcaaccttgaacatattgctaccagtagtgcggtttcaaaggagctcaccaga
cttttgaagattcctgttgacacttacaacaatattttaacagtcttgaaattaaaacat
ttccacccactctttgagtattttgactatgagtccagaaagagcatgagttgttacgtg
cttagtaatgttctagattataatacagaaattgtctctcaagaccaggtggattccata
atgaatttggtatctacactgattcaggatcagccagatcaacctgtagaagaacctgac
ccagaggactttgccgatgagcagagccttgtgggcagattcattcatcttctacggtct
gaggaccctgaccaacagtacttgattttaaacacagcacgaaaacattttggagctggt
ggaaatcaacggattcgcttcacactgccacctttggtatttgcagcttaccagctggct
tttcgctacaaagagaattctaaagtggatgacaaatgggaaaagaaatgccagaagatt
ttttcatttgctcaccagactatcagtgctttgatcaaagcagagctggcagaattaccc
ttaagactttttcttcagggggctctagctgctggagaaattggttttgaaaatcatgaa
acagtagcatatgaatttatgtcccaggcattttctctgtacgaagatgaaatcagtgat
tccaaagcacaactggctgccatcaccttgatcattggtacttttgagaggatgaagtgc
ttcagtgaagaaaaccatgaacccttgaggactcagtgtgctcttgctgcatccaaactt
ctgaagaagcctgatcagggccgagctgtgagcacctgtgcacatctcttctggtctggc
agaaacacagacaaaaacggagaggagctgcatggaggcaaaagggtaatggaatgccta
aagaaagctctgaaaatagcaaatcagtgcatggacccctctctacaagtgcaacttttt
atagaaatcctgaacagatatatctatttttatgaaaaggaaaatgatgcggtcactatt
caggttttgaatcagcttatccaaaagattcgagaagacctcccaaatcttgaatccagt
gaagaaacagagcagattaacaaacattttcataacacactggagcatttgcgcttgagg
cgggaatcaccagaatctgaagggccaatttatgagggtctcatcctttaa
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