Capra hircus (goat): 102172812
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Entry
102172812 CDS
T02910
Symbol
PARK2
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
chx
Capra hircus (goat)
Pathway
chx04120
Ubiquitin mediated proteolysis
chx04137
Mitophagy - animal
chx04141
Protein processing in endoplasmic reticulum
chx05012
Parkinson disease
chx05014
Amyotrophic lateral sclerosis
chx05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102172812 (PARK2)
04120 Ubiquitin mediated proteolysis
102172812 (PARK2)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102172812 (PARK2)
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
102172812 (PARK2)
05014 Amyotrophic lateral sclerosis
102172812 (PARK2)
05022 Pathways of neurodegeneration - multiple diseases
102172812 (PARK2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chx04131
]
102172812 (PARK2)
04121 Ubiquitin system [BR:
chx04121
]
102172812 (PARK2)
03029 Mitochondrial biogenesis [BR:
chx03029
]
102172812 (PARK2)
Enzymes [BR:
chx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
102172812 (PARK2)
Membrane trafficking [BR:
chx04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
102172812 (PARK2)
Aggrephagy
Other aggrephagy associated proteins
102172812 (PARK2)
Xenophagy
Other xenophagy associated proteins
102172812 (PARK2)
Ubiquitin system [BR:
chx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
102172812 (PARK2)
Mitochondrial biogenesis [BR:
chx03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
102172812 (PARK2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR_2
IBR_1
IBR
Rad60-SLD
AsnRS_N
Motif
Other DBs
NCBI-GeneID:
102172812
NCBI-ProteinID:
XP_017908933
LinkDB
All DBs
Position
9:complement(84276199..85489623)
Genome browser
AA seq
465 aa
AA seq
DB search
MIVFVRFNSNHGFPVEVDSDTSIFQLKEVVAKRQGVPADQLCVIFAGKELRNGLTVQSCD
LDQQSIVHIVLRPRRKDPEGHSPRGDSPRPAWGRSDREPESLTRVDLSSALLPADSVGLA
AILQDSEEGGASSARRPAGKPTYNSFYVYCKGPCQGVQPGKLRVRCSTCQQATLTLAQGP
SCWEDVLIPNQMSGECRSPNCPGTRAEFFFKCGAHPTSDKETSVALNLITTNSRDISCIT
CTDIRSPVLVFQCTHRHVICLDCFHLYCVTRLNDRQFVHDSQLGYSLPCVAGCPNSLIKE
LHHFRILGEEQYNRYQQYGAEECVLQLGGVLCPSPGCGAGLLPEAGQRKVTCEPAHGLGC
GFVFCRDCKEPYHEGDCGAMIEASGAVTQAYRVDEKAAEQARWEEASKETIKKTTKPCPR
CHVPVEKNGGCMHMKCPQPQCQLQWCWNCGCEWNRACMGDHWFDV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgtttgtcaggttcaactctaaccacgggttcccagtggaggtcgattctgac
accagcatcttccagctcaaggaggtggttgctaagcgacagggggttccagctgaccag
ctgtgtgtgattttcgcagggaaggagcttcggaatggcttgacagtgcagagctgtgac
ctggatcagcagagcatcgttcacattgtgctgagaccgcgcagaaaagacccagaaggg
cactcacctcggggggacagcccgcggcccgcttgggggcgctctgacagggagcccgag
agcctgactcgcgtggacctcagcagcgcgctgctccccgccgactcggtgggcctggct
gcgatactgcaggacagcgaggagggcggcgcctcgtccgcccgcaggccagcaggtaaa
ccgacctacaacagcttttatgtctactgcaaaggcccgtgtcaaggagtgcagccggga
aagctcagggtgcggtgtagcacctgccaacaagcaacgctcaccttggcccagggtcct
tcttgctgggaagatgtcttaatcccaaaccaaatgagtggtgaatgccggtctccaaac
tgccctgggaccagagcggaatttttttttaaatgtggagcacacccgacctctgacaag
gaaacatcagtagctttgaacctgatcacaacaaacagtcgagacatcagctgcataacg
tgtacggacatcaggagccccgtcctggttttccagtgcacccaccgccacgtgatctgc
ttagactgcttccacctgtactgcgtgaccagactcaacgatcggcagtttgtccacgac
tcgcagcttggctactctctgccttgcgtggctggctgtcccaactccttgattaaagag
ctccatcacttcaggattcttggagaagagcagtacaatcggtaccagcagtacggggcg
gaagagtgcgtgctgcagctagggggcgtgctctgccccagcccgggctgcggggcgggg
ctgcttccagaagcgggccagcggaaggtcacctgcgaaccggcccacggcctgggctgc
gggttcgtcttctgccgggactgtaaggagccgtaccacgaaggtgactgcggcgccatg
attgaagcctcaggagcagtcactcaggcctacagagtcgatgagaaggcagcagagcag
gcccggtgggaggaagcctccaaagaaacaatcaaaaagaccaccaagccctgtccccgc
tgccacgtgcccgtggagaagaacggaggatgcatgcatatgaagtgcccgcagccccag
tgccagctccagtggtgttggaactgcggctgcgagtggaaccgcgcctgcatgggggac
cactggttcgacgtgtag
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