Capra hircus (goat): 102172884
Help
Entry
102172884 CDS
T02910
Symbol
DDX39A
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
chx03041
]
102172884 (DDX39A)
Enzymes [BR:
chx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102172884 (DDX39A)
Spliceosome [BR:
chx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102172884 (DDX39A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102172884
NCBI-ProteinID:
XP_005682313
UniProt:
A0A452F7Z2
LinkDB
All DBs
Position
7:96737973..96746769
Genome browser
AA seq
427 aa
AA seq
DB search
MAEQDVENELLDYEEDEEPQAPPESAPPPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCH
TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKRNCPHVVVGTPGRILALVR
NRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCM
ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacaggatgtggaaaacgagcttctggattatgaggaagatgaagagccccag
gcacctccagagagcgctccacctccccccaagaaagacgttaagggttcctatgtttcc
atccacagctctggcttccgggactttctgttgaagccagagctcctgagggccatagtg
gactgtggctttgagcatccatcagaggtccagcacgagtgtattccgcaagccatcctg
ggcatggacatcttgtgccaggccaaatcagggatgggcaagacagcggtttttgtgttg
gccactctgcagcagattgagcccgtcaacggacaggtgacggtcctggtgatgtgccac
actcgagagctggccttccagatcagcaaggagtacgagcgcttctccaaatacatgccc
agcgtcaaggtgtctgtgttctttgggggcctgtccatcaagaaggatgaggaggtgttg
aagaggaactgtccccacgtggtggtggggacgccgggccggatcctggcacttgtgcgc
aataggagcctcaacctgaagaatgtgaagcacttcgtgttggatgagtgcgacaagatg
ctggagcagctggatatgcggcgggacgtgcaggaaatcttccgcctgaccccccacgag
aagcagtgcatgatgttcagcgccaccttgagcaaggagatccgacccgtgtgcaggaag
ttcatgcaagatcccatggaggtgtttgtggacgacgagaccaagctcacgctgcacggg
ctacagcagtactacgtgaaactcaaggacagtgagaagaaccgcaagctcttcgacctc
ctggatgtgttggagtttaaccaggttgtgatctttgtgaagtcagtgcagcgctgcatg
gccttggcccagctcctggtggaacagaacttcccagctattgccatccacaggggcatg
gctcaggaggagcgcctgtcgcgctatcagcagttcaaggacttccagcggcggatcctg
gtggccaccaatctgttcggccgagggatggacattgagcgcgtcaacatcgtcttcaat
tatgacatgcctgaggactcggacacctacctccaccgtgtggcccgtgcgggtcgcttc
ggtaccaaaggcctggccgttactttcgtgtctgacgagaacgatgccaaaatcctcaat
gatgtccaggaccggtttgaagtgaacgtggcagagcttccagaagaaattgacatctcc
acatacattgagcagagccggtaa
DBGET
integrated database retrieval system
