Capra hircus (goat): 102173108
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Entry
102173108 CDS
T02910
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
chx
Capra hircus (goat)
Pathway
chx04068
FoxO signaling pathway
chx05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
102173108 (RAG1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
102173108 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
chx04121
]
102173108 (RAG1)
Enzymes [BR:
chx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102173108 (RAG1)
Ubiquitin system [BR:
chx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102173108 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1_imp_bd
RAG1_ZnH2
RAG1_RNase_H
RAG1_C
RAG1_pre-RNase_H
RAG1_ZnC2
RAG1
RAG1_DNA-bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-RING_10
zf-C3HC4_4
zf-RING_UBOX
Lentivirus_VIF
Motif
Other DBs
NCBI-GeneID:
102173108
NCBI-ProteinID:
XP_005690149
UniProt:
A0A452EFW4
LinkDB
All DBs
Position
15:complement(15921888..15925019)
Genome browser
AA seq
1043 aa
AA seq
DB search
MAVSLPPTLGLSSAPDEIQHPHIKFSEWKFKLFRVRSFEKAPENAQAEKQDSSEGKPSLE
QSPAALDKAGGLKPALTQPPLKPHPKFLKKSHDDGKARDKAIHQANLRHLCRICGNSLKA
DRHHRRYPVHGPVDGKTQVLLRKKEKRATSWPDLIAKVFRIDVKADVDSIHPTEFCHDCW
TFMQRKFSSAPCEVYPSRNTAMEWHPHTPSCDICDAARQGLKRKSQPPNSQLSKRLRTVI
DRARQARRCKRRTQDRISSKELMKKIANCSKIHLSTRLLAVDFPAHFVKSISCQICEHIL
ADPVETNCKHVFCRICILRCLKIMGSYCPSCRYPCFPTDLESPVKSFLSILNSLMVKCPA
EECDEEVTLEKYNHHVSSHKESKETFVHINKGGRPRQHLLSLTRRAQKHRLRELKMQVKA
FADKEEGGDVKSVCLTLFLLALRARNEHRQADELEAIMKGRGSGLQPAVCLAIRVNTFLS
CSQYHKMYRTVKAITGRQIFQPLHSLRSAEKVLLPGYHPFEWQPPLKNVSSSTDVGIIDG
LSGLASSVDDYPVDTIAKRFRYDAALVSALMDMEEDILEGMRAQELDDYLNGPFTVVVKE
SCDGMGDVSEKHGSGPAVPEKAVRFSFTVMKVSIARGSQNVKVFEEAKPNSELCCKPLCL
MLADESDHETLTAILSPLIAEREAMKSSELMLEMGGILRTFKFIFRGTGYDEKLVREVEG
LEASGSVYICTLCDATRLEASQNLVFHSITRSHAENLERYEVWRSNPYHETVEELRDRVK
GVSAKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYKNPNASKEERKRWQATLDKHL
RKKMNLKPIMRMNGNFARKLMTKETVEAVCELIPSQERHEALKELMDLYLKMKPVWRSSC
PAKECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWA
SEGNESGNKLFRRFRKMNARQSKYYEMEDVLKHHWLYTSKYLQKFMNAHNALKDSGFTLN
SQGGLGDSLDLEESPESQDSMEF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctctctgccacccaccctgggactcagttctgccccagatgaaatccagcat
ccacatattaaattttcagaatggaaatttaagctgttcagggtgagatcctttgaaaag
gcccctgaaaatgctcaagcagaaaagcaagattcctctgaggggaagccctctctagag
caatctccagcagccctggacaaggctggtggtctgaagccagccctgactcaaccgcca
ttaaagcctcacccaaaatttctgaaaaaatcccacgatgatggaaaagcaagagacaaa
gcaatccaccaagccaacctgcgacatctctgccgcatctgtgggaattctctcaaagct
gatcgacaccacaggagatatccagtccacgggcccgtggatggcaaaacccaagtcctc
ttacgaaagaaggaaaagagggccacatcctggccagacctcattgccaaggtcttccgg
atcgacgtgaaggcagatgtggactcgatccaccccactgagttctgccatgactgctgg
accttcatgcagaggaagttcagcagtgccccgtgtgaggtttacccctcgagaaacaca
gcgatggaatggcacccccacacaccatcctgtgacatctgtgatgctgcccgtcaagga
ctcaagaggaagagtcagccgccaaactcgcagctcagcaaaagactcagaactgtgatc
gaccgagcgagacaagcccgacggtgcaagagaagaactcaggacaggatcagcagcaag
gaactgatgaagaagattgccaactgcagtaagatacacctcagtaccaggctcctggca
gtggacttcccagcgcactttgtgaaatctatctcctgccagatttgcgaacacattctg
gcggaccccgtggagaccaactgtaagcacgtcttttgcaggatctgcattctcagatgc
ctcaaaatcatgggcagctattgtccctcttgccggtatccctgtttccccaccgacctg
gagagtccggtgaagtcttttctgagcatcttgaattccctgatggtgaaatgtccagca
gaggagtgcgatgaggaggtcaccttggaaaaatacaatcaccatgtctcaagccacaag
gaatcgaaagagacttttgtgcatatcaataaagggggccggccccgccagcatctcctg
tccctgacccgccgggctcagaagcaccggctgagggagctcaagatgcaggtcaaggct
ttcgccgacaaggaggaaggtggggatgtgaagtccgtgtgcctgaccttgttcctgctg
gcgctgagagcaagaaatgagcacagacaagcagatgagctggaggccatcatgaaggga
cgtggctccggcctgcagccggctgtctgcttagccatccgtgtcaacaccttcctcagc
tgcagccagtaccacaagatgtacaggactgtgaaggccatcaccgggaggcagattttc
cagcctctgcactcccttcggagcgctgagaaagtccttctgccaggctaccaccccttc
gagtggcagccacctctgaagaacgtgtcttccagcactgacgtgggcattattgatgga
ctgtccggactggcctcctctgtggacgattacccggtggacaccatcgccaagcgcttc
cgctatgatgcagctttggtgtccgctctgatggacatggaagaagacatcctggagggc
atgagagcccaagagctcgacgactacctgaatggccccttcaccgtggtggtgaaggag
tcttgtgatgggatgggagacgtgagcgagaagcacggcagcggaccggccgttccggaa
aaggcggtccggttttccttcacggtcatgaaagtcagcattgctcgcgggtcacagaac
gtgaaggtgttcgaggaagccaagccgaactccgagctgtgctgcaagccgctgtgcctc
atgctagccgatgagtctgaccacgagacgctgacggccatcctgagccctctgattgcc
gagagggaggccatgaagagcagcgaattaatgctggagatgggaggcatcctccggact
ttcaagttcatctttaggggcaccggctacgacgagaaactggtccgggaagtggaaggt
ctcgaggcttccggctcagtgtacatttgcaccctttgtgatgccacccgcctggaggcc
tctcaaaatctggtcttccactccataaccagaagccatgctgagaatctggagcgctat
gaggtctggcgttcgaacccctaccatgagacggtggaggaactgcgggaccgggtgaag
ggggtctcggccaaaccctttattgagacggttccttccatagatgcgctccactgcgac
atcggcaatgcggctgagttctacaagatcttccagctggagatcggagaggtgtataag
aaccccaacgcctccaaagaggaaaggaaaagatggcaggctaccctggacaagcacctc
cggaagaagatgaacctaaagcccatcatgaggatgaacggcaactttgcccggaagctc
atgaccaaagagacggtggaggcagtttgtgaattaattccctcccaggagaggcacgaa
gccctgaaggaactgatggacctttatttgaagatgaaacccgtctggcgatcctcatgc
cctgctaaagagtgcccggaatccctctgccagtatagcttcaattcacagcgctttgct
gagctcctctccaccaagttcaagtatagatatgagggcaaaatcaccaattattttcac
aaaaccttggctcacgtccctgaaattattgagagggatggctccattggggcatgggca
agcgagggaaatgaatctggcaacaaactgttcaggcgtttccggaaaatgaatgccagg
cagtccaagtactatgaaatggaagacgttttgaaacatcactggttgtatacctccaaa
tacctgcagaagttcatgaatgctcacaatgccctgaaagactcggggtttaccctaaac
tcgcagggaggcttaggggactcgttagacctagaggaatccccagaatcccaagattca
atggaattttaa
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