Capra hircus (goat): 102173130
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Entry
102173130 CDS
T02910
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
chx
Capra hircus (goat)
Pathway
chx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102173130 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chx03032
]
102173130 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
chx03400
]
102173130 (TOPBP1)
DNA replication proteins [BR:
chx03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
102173130 (TOPBP1)
DNA repair and recombination proteins [BR:
chx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
102173130 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
102173130
NCBI-ProteinID:
XP_005675612
UniProt:
A0A452G8I1
LinkDB
All DBs
Position
1:135291546..135366855
Genome browser
AA seq
1521 aa
AA seq
DB search
MSKNDKEPFFVKFLKSSDNSECFFKALESIKEFQSEEYLQIITEEEALKIKENDRSLYIC
DPFSGDAFDHLQKLGCRIVGPQVVIFCMHHQRCVPRAEHPVYNMVMSDVTVSCTSLEKDR
REEVHKYVQMMGGRVYRDLNISVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQ
EKKIARYTDINMEDFKCPIFLGCIICVTGLCTLDRKSVQQLTVKHGGQYMGQLKMNECTH
LIVQEPKGQKYECAKRWNVHCVTMQWFFDSVEKGFCQDESIYKAEPRSEAKSMPDTSTPT
GQINTIDSRTLSDVSHISNINASCINESICNSVNSKLEPTVENLENLDVSAFQAPEDLLD
GCRIYLCGFNGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDDDDELKQFWDKSAHRPH
VVGAKWLLECFSKGYMLPEEPYIRVNYQPVEIPVSDQPESKTALLKRKNSSFSKNDFAPE
EKHEQADEDLLSQYQTNNPTVVEVAKSEVGLCSDYTHVEPLNDSTHISLQEHQSSISHCL
PDVSTITEEGLFSQKSFLVLGFGNENESNIAAIIRENAGKIVSLQSRVVADYAVVPLLGC
EVQATVGEVVTNTWLVTCIDYQTLIDPKSNPLFTPVPVMAGMTPLEDCVLSFSQCVGAEK
DSLTFLANHLGASVQEYFVRKSNAKKGMFASTHLVLKEPGGSKYEAAKKWNLPAVTIAWL
LESARLGKRANENHFLIENSSKEEQSLETETTNEVNLNPDTPEHPVTHRETQRKTAITPL
DMNRFQSRAFRMVMSQHSGQASVSPAPGQSLQKEPSLHLDTPSKFLSKDKLFKPSFDVKD
ALAALETPGGPSQQKRKLSTPLSEVIVKNLKVALANSSRNAVALSASPQLKDAQSEKEDT
PKPLQKVVVCVSKKLSKKQSELNGIAASLGADYRWSFDETVTHFIYQGRPNDTNREYKSV
KERGVHIVSEHWLLECAQEYKHLPESLYPHTYNPKMSLDISTVQDGRLCNNRLSSAGSPM
RDDEPDHMPIEENDIDNMTTSNKELTTSNGNGRNDSKGALTQTLEMRENFQKQLQEIMSA
TSIVKPQGQRTSLSRSGCNSTSSTPDSTRSARSGRSRVLEALRQSRQTVPDINTEPSQNE
QIIWDDPTAREERARLASNLQWPSCPTQYSELQVDVKKLEDSPFQEPLHDSEIAEQVVCD
PRNVCVTGAPKHPISEELETPMKDSHLIPTPQAPSIAFPLANPPVAPHPREKIITIEETH
EDLKKQYIFQLSSLNPQERIDYCHLIEKLGGSVIEKQCFDPSCTHIVVGHPLRNEKYLAS
VAAGKWVLHRSYLEACRTAGRFMSEEDYEWGSSSILDVLTGINVQQRKLALAAMRWRKKI
QERQESGIIEGAFSGWKVILHVDQSRESGFKRLLQSGGAKVLPGYSVSLFKEATHLFSDF
NKQKPDDSGVNIAEAAAQNVYCLKTEYIADFLMQESPPQVENYCLPEAASFLQNKKEPGP
GFSQKRKAPTEKNKIKRPRVQ
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaatgacaaagaaccgttttttgtgaagtttttaaagtcttcagacaattct
gaatgtttttttaaagctcttgagtcaataaaagaattccaatcagaagaatatcttcag
attattacagaagaagaagcattgaaaataaaggaaaatgatagatcactgtatatctgt
gacccctttagtggtgatgcctttgatcatctccaaaagcttggttgcagaattgttggt
cctcaagtagtcatattttgtatgcaccaccagcgatgtgtcccaagagctgaacatcca
gtttataacatggttatgtctgatgtaaccgtgtcttgtacgagcctggaaaaagacaga
agggaagaagttcataaatatgtacaaatgatgggtggacgtgtatacagagaccttaac
atatcagtaactcaccttattgcaggagaagttggtagcaaaaaatacttagttgctgca
aacctaaagaaacctattttgcttccttcttggataaaaacactttgggagaagtcacag
gagaagaaaatagctagatataccgatataaacatggaagacttcaagtgtcctattttt
cttggttgcataatctgtgtgactggcttatgtaccttagacaggaagtcagttcagcag
ctcacagtaaagcatggaggacagtacatgggacagttgaaaatgaatgagtgtacacac
ctcattgtgcaagaaccaaaaggtcaaaaatatgaatgtgccaagagatggaatgtacac
tgtgtgaccatgcaatggttttttgacagtgttgagaaaggtttttgtcaggatgaatcc
atatacaaggcagagcctagatcagaagcaaagagtatgcctgatacttcaactcctact
ggccagatcaacacaattgatagtcgtactctttcagatgtcagccatatttccaacatc
aatgcaagctgcataaatgaatcaatatgtaattcagttaatagcaaactggaacctaca
gttgaaaatctggaaaatttggatgtcagtgcatttcaggcacctgaagatttattagat
ggttgtcggatctatctttgtggttttaatggcagaaagctagataaactgagaagactt
attaacagtggaggtggagttcgttttaatcagctcaatgaagatgtaactcatgttatt
gtgggagatgatgatgatgaattgaagcagttttgggataaatcagcccacaggcctcat
gtagtgggagcaaaatggttgctagagtgttttagtaaaggttatatgcttcctgaagag
ccatacatccgtgttaactaccagccagtggaaattccagtttcagatcaacctgaaagt
aaaacagcccttttaaaaaggaagaacagcagcttctctaagaatgactttgctcctgaa
gaaaagcatgagcaagctgatgaagatctactctctcaatatcagactaataacccaaca
gtagttgaagttgccaagtccgaagttgggctctgcagtgactatactcatgtggagccc
cttaatgattctactcatatttctctgcaagaacaccagtcttccatcagtcattgcctc
cctgatgtttctacaattaccgaagaaggtttatttagccaaaagagtttcctagttttg
ggttttggtaatgaaaatgaatctaatattgcagccatcataagagaaaatgctggaaaa
attgtgtcccttcagagcagagttgttgctgattatgctgtggttcctctgctggggtgt
gaagtacaggcgactgtgggagaagttgtaacaaacacatggctggtaacttgtatagac
taccagactttaattgatccaaagtcaaatcctctcttcacaccagttccagttatggca
ggaatgactcctttagaggattgtgttctttcattcagccaatgtgtaggagctgaaaaa
gactcattgacattcttagcaaatcaccttggagccagtgttcaggaatactttgttcgc
aagtccaatgcaaagaaaggcatgtttgccagtacacatcttgttttgaaagagccaggt
ggttctaaatatgaagctgccaagaagtggaatttaccagcagtcactatagcttggctg
ttggagtctgctagattgggaaagagagcaaatgaaaaccatttcctgattgaaaattca
tctaaagaagaacaaagtttggaaactgaaacaacaaatgaggtgaatctaaatccagat
actccagagcatcctgtaacacatcgggaaactcagaggaaaacagccattacaccttta
gatatgaaccgcttccagagtagggctttccgcatggtaatgtcacagcactccggacag
gcttcagtctccccagccccaggacagtcacttcagaaggagccctcattacacctggat
acgccgtcaaagtttctgtccaaggacaaactcttcaagccttcctttgatgtgaaggat
gcacttgcagccttggaaactccaggaggtcccagccagcagaaaaggaaactgagcaca
ccactctcagaagtcatcgtcaaaaacctgaaagttgctttggcaaatagctctcgaaat
gctgttgctctttctgccagccctcaactgaaggatgcccagtcagaaaaggaagacact
ccgaagccacttcagaaggtagtggtgtgtgttagtaagaaactcagtaagaagcagagt
gaactaaacgggattgcagcctctctaggtgcagactacaggtggagttttgatgagaca
gtgactcatttcatctatcaaggacgaccaaatgacactaatcgggagtataaatctgta
aaagaaagaggagtacacattgtttcagagcactggcttttagaatgtgcccaggagtat
aaacatcttcctgaatctctttatccgcacacttataatcccaaaatgagcttggacatc
agtacagtgcaagatggccgactctgtaataaccgactatcctcagctggctctccaatg
agggatgatgagccagatcatatgcctatagaagaaaatgatatagacaatatgaccacc
agtaataaagaactaacaacatcaaatggaaatggaaggaatgactctaaaggagctctg
acacagactttggagatgagagagaactttcaaaagcagcttcaggagataatgtctgca
acttcaatagtgaaaccccaagggcagaggacttccctctcaagaagtggttgtaacagt
acctcttcaactcctgacagcacccgctctgcccgcagtggacgaagtagagtcctagag
gcactgaggcagtctcgtcaaacagtacctgatatcaacacagagccctcccaaaatgag
cagatcatttgggatgaccctacagccagggaggagagagcaagacttgccagcaatctg
cagtggcctagttgtcccacacaatactctgagcttcaggttgatgttaaaaaattggag
gattcgcctttccaggagcctttacatgattcagaaattgctgaacaggttgtttgtgat
cccaggaacgtatgtgtgactggagccccaaaacacccgatctctgaagaactggaaact
ccaatgaaagacagccacctgatccctacacctcaagcccccagtattgccttcccccta
gccaacccacctgtggctccacaccctagagaaaagattataacaatagaggagactcat
gaagacttaaaaaaacagtacatatttcagttgtcatctctgaatcctcaagaacgtatt
gattattgtcatctgattgaaaaactaggtggatcagtgattgagaagcagtgctttgat
cccagctgtacacacattgttgtggggcatccacttcgcaacgagaaatatttagcttcc
gtggcagcaggaaagtgggtactccatcgctcctaccttgaagcttgcaggactgctggg
cgcttcatgtcggaagaagactatgagtggggaagtagttccatactcgatgttttgact
ggaatcaatgtacagcaacgaaaattagcacttgcagcaatgagatggaggaaaaaaatc
caggaaagacaagaatcaggcattattgagggggcatttagtgggtggaaagttatttta
catgttgatcagtcccgagaatcaggattcaaacgcctacttcagtcaggaggagcaaag
gtgctgcctggttattctgtatctttatttaaagaagctacacatctcttttctgacttt
aataaacagaaaccagatgactcaggagttaatatagcagaagctgctgcccagaatgta
tactgcttgaaaacagaatacattgctgattttcttatgcaggaatcccctcctcaagta
gaaaattactgtctaccagaggctgcttcatttcttcagaataaaaaggaacctgggcct
ggattctcacaaaagaggaaagctcctacagaaaaaaataaaatcaaacgacccagagta
cagtaa
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