Capra hircus (goat): 102173435
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Entry
102173435 CDS
T02910
Symbol
ABCA3
Name
(RefSeq) ATP-binding cassette sub-family A member 3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
chx
Capra hircus (goat)
Pathway
chx02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102173435 (ABCA3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chx02000
]
102173435 (ABCA3)
Transporters [BR:
chx02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
102173435 (ABCA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_22
AAA_15
RsgA_GTPase
AAA_29
Motif
Other DBs
NCBI-GeneID:
102173435
NCBI-ProteinID:
XP_017895916
UniProt:
A0A452FE99
LinkDB
All DBs
Position
25:complement(1701870..1743075)
Genome browser
AA seq
1704 aa
AA seq
DB search
MAVLRQLALLLWKNYTLQKRKVLVTLLELFLPLLFSGILIWLRLKIQSENVPNATLYPSQ
SIQELPLFFSFPPPGATWELAYIPSQSEAVRTVVENVQRALVINLRAHGFASEKDFEDYI
RYDNRSSNVLAALVFEHTFNHSRDPLPLAVKYHLRFSYTRRNYMWTQTGSFFLKETEGWH
TTSLFPLFPNPGPREPTSPDGGEPGYIREGFLAVQHAVDRAIMHYHANASAHQLFEKLTV
IAKRFPYPPFISDPFLVAIQYQLPLLLMLSFTYTSLSIIRAIVQEKEKKLKEYVRMMGLS
SWLLWTAWFLLFFLLLLVAVSFMTLLFCIKVKKGVAVLAHSDPALVLVFLACFAVSSISF
SFMVSTFFSKANMAAAIGGFLYFFSYIPYFFVAPRYNWMTLSQKLFSCLLSNVAMAMGAQ
LIGKFEAKGTGIQWRDLLSPVNVDDDFTFGQVLGMLLLDSVLYGLVTWYVEAVLPGQFGV
PQPWYFFILPSYWCGRPRTVLGKEEEDDDPEKVLRTEYFEAEPEDLVAGIKIKHVSKVFR
VGNKGKAAVRDLNLNLYEGQITVLLGHNGAGKTTTLSMLTGLFPPTNGRAYISGYEVSQD
MDQIRKSLGLCPQHDVLFDNLTVAEHLYFYAQLKGLPRQKCPEEVKRMLHVLGLEEKRDS
RSRFLSGGMRRKLSIGIALIAGSKVLMLDEPTAGVDAVSRRAIWDLLQQHKSGRTVLLTT
HFMDEADLLGDRIAIMAKGELQCCGSPLFLKEKYGAGYHMTLVKEPHCNPEGISRLVQHH
VPNATLESSAGAELSFILPKESTHRFESLFAKLEKKQKELGIASFGASVTTMEEVFLRVG
KLVDTSMDIQAIQLPALQYQHERRASDWAVDGHLCGTMDPTDGVGALIEEECTAIRLNTG
LALHCQQFWAMFLKKAAYSWREWKVVAAQVLVPVTCLTLALLAINYSSEIFDDPLLKLTL
GEYGRTVVPFSVPGTSRLDQQLSEHLKDMLQAEGQEPREVLGDLEEFLIFRASVEGGGFN
ERCLVAASFRDTGEHTVVTALFNNQAYHSPATALAIVDNLLFKLLCGPRASITVSNFPQP
RSALQAAKDQFNEGRKGFDIALNLLFAMAFLASTFSILAVSERAVQAKHVQFVSGVHVAT
FWLSALLWDLLSFLVPSLLLLVVFKAFDVHAFTRDGHVADALLLLTLYGWAIIPLMYLMS
FFFSGAATAYTRLTIFNILSGIATFLVVTIMRIPAVKLEELSRTLDRVFLVLPNHCLGMA
VSNFYENYETRRYCTSSDVAAHYCRKYNIQYQENFYAWSTPGVGRFVTSMAASGFACLTL
LFLVEAGLLWRLKTCLCAFQRRRALTELYPRTAALPEDQDVTDERNRILSPNLDSLLDTP
LIIKELSKVYEQRAPLLAVDKVSLAVQKGECFGLLGFNGAGKTTTFKMLTGEETITSGDA
FVGGYSISSDIGKVRQRIGYCPQFDALLDHMTGRETLVMFARLRGIPERHIGACVENALR
GLLLEPHANKLVRTYSGGNKRKLSTGIALLGEPAVIFLDEPSTGMDPVARRLLWDTVARA
RESGKAIVITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLRAKIRSDGQ
QEALEEFKAFVGLTFPGSVLEDEHQGMVHYHLPGDGLSWAKVFGVLEKAKEKYGVDDYSV
SQTSLEQVFLSFAHLQPPTEDAGP
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcttaggcagctggcgctgctgctctggaagaactatactctgcagaagcgg
aaggtcctggtgaccctcttggagctctttctgccccttctgttctctgggatcctgatc
tggctccgcctgaagatacagtcagagaacgtgcccaatgccaccctctaccccagccag
tccatccaagagctacccctcttcttcagcttccctcccccgggggccacctgggagctg
gcctacatcccatcccaaagtgaggcggtacgcacggtggtggagaacgtgcagagggcg
ctggtgatcaacctgcgagctcacggcttcgcctccgagaaggacttcgaggactacatc
agatacgacaaccgctcctccaatgtgctggccgccctggtgttcgagcacaccttcaac
cacagccgggaccccctgccgctggcggtgaaataccacttacgcttcagttacacgcga
agaaactacatgtggactcagacaggctcttttttcctgaaagagacagagggatggcac
accacttccctttttccactcttcccgaacccaggacccagggagcccacgtcccctgat
ggcggagaacctggttacatccgtgagggcttcctggccgtgcagcacgcggtggacagg
gccatcatgcattaccatgccaacgcctccgcgcaccagctgttcgagaagctcacggtg
atcgccaagcggttcccttacccacctttcatctccgaccccttcctggtcgccatccag
taccagcttccactgctgctcatgctgagcttcacctacacctccctcagcatcatccgg
gccatcgtgcaggagaaggagaagaagctgaaggagtacgtgcgtatgatggggctcagc
agctggctgctctggaccgcgtggttcctcctcttcttcctcctcctccttgtcgccgtc
tccttcatgacccttctcttctgcatcaaggtgaagaagggcgtggcggtgctggcgcac
agcgaccccgcactggtgctggtcttcctggcctgctttgccgtctcctccatctccttc
agcttcatggtcagcaccttcttcagcaaagccaacatggcagcggccattggcggcttc
ctctacttcttctcctacatcccctacttcttcgtcgctcctcggtacaactggatgacg
ctgagccagaagctcttctcctgcctcctgtccaatgtcgccatggcgatgggagcccag
ctcatagggaaatttgaagccaaaggcacgggcatccagtggcgagacctcctgagtccc
gtcaatgtggacgacgacttcacctttgggcaggtgctgggcatgctgctgctggactct
gtcctctacgggctggtgacctggtacgtggaggccgtcctcccgggccagtttggcgtg
ccccagccctggtacttcttcatcctgccctcgtactggtgcggacgcccgaggacggtg
cttgggaaagaggaggaggacgacgaccctgagaaggtgctcaggactgagtactttgaa
gctgagcccgaggacctggtggccgggatcaagatcaagcacgtgtccaaggtgttcaga
gtggggaacaagggcaaggcggccgtcagagacctgaacctgaacctgtacgagggccag
atcaccgtcctgctgggccacaatggcgcggggaagaccaccaccctctccatgctcacg
ggtctcttccccccgaccaacggacgagcatacatcagtgggtatgaagtctcccaggac
atggatcagatccggaagagcctaggcctgtgcccacagcacgacgtcttgtttgacaac
ctaaccgttgccgagcacctctacttctacgctcagctgaaaggcttgccgcgtcagaag
tgccctgaggaggtcaaacgcatgctgcacgtgctcgggctggaggagaagcgggactcc
cggagcaggtttctgagcggcgggatgcggcgcaagctctccatcggcatcgccctcatc
gcgggctccaaggtgctgatgctggacgagcccaccgcaggcgtggacgccgtctccagg
agggccatctgggaccttctgcagcagcacaagagcggccgcaccgtcctgctgaccacc
cacttcatggacgaggccgacctgttgggggaccgcatcgccatcatggccaagggggag
ctgcagtgctgcgggtcgccgctgttcctcaaggagaaatacggcgcaggctaccacatg
acgctggtgaaggagcctcactgcaaccccgagggcatctcccggctggtccagcaccac
gtccccaatgccaccctggagagcagcgccggggcagagctgtcgttcattcttcccaag
gagagcacgcacaggtttgaaagtctttttgctaaactggagaagaagcagaaggagctg
ggcatcgccagcttcggggcctccgtcaccaccatggaggaggtcttcctccgggttggc
aagctggtggacaccagcatggacatccaggccatccagctccctgccctgcagtaccag
catgagcggcgggccagcgactgggccgtggatggccacctgtgcgggaccatggacccg
accgatggcgtcggtgcgctgattgaggaggagtgcactgccatcaggctcaacaccggg
ctggccctccactgccagcagttctgggccatgttcctgaagaaggctgcctacagctgg
cgcgagtggaaggtggtggcagcccaggtcctggtgcccgtgacgtgcctcaccctggcc
ctcctggccatcaactactcctccgagatcttcgacgaccccctcctgaagctgaccctg
ggcgagtacggccgcaccgtcgtgcccttctcggtccctgggacctctcggctggatcag
cagctgtcggagcatctgaaagacatgctgcaggccgagggccaggagcctcgagaggtg
ctgggtgacctggaggagttcctgattttcagggcctcagtggaggggggcggcttcaac
gagcggtgcctggtggcagcgtccttcagagacacaggcgagcacacggtcgtcaccgcc
ctgttcaacaaccaagcgtaccactctccagccaccgcactggccattgtggacaacctc
ctgttcaagctgctatgcggcccccgagcctccatcacagtgtccaacttcccccagccc
cggagcgccctgcaggctgccaaggaccagtttaatgagggccggaaaggattcgacatc
gccctcaacttgctgttcgccatggcattcctggccagcacattctccatcctagcagtc
agcgagagggccgtccaggccaagcatgtgcagttcgtgagcggtgtccacgtggctact
ttctggctctcggctctgctgtgggacctcctatccttcctcgtccccagtctgctgctg
ctggtggtattcaaggccttcgacgtgcacgccttcacgcgggacggacacgtggctgac
gccctgctgctgctcacgctctacggctgggccatcatccccctcatgtacctgatgagc
ttctttttctccggggcagccaccgcctacacgcggctgaccatattcaacatcctgtcg
ggcatcgccaccttcctggttgtcaccatcatgcgcatcccagcggtcaagttagaagaa
ctttccagaaccctggaccgcgtgttcctggtgcttcccaaccactgcttgggcatggcg
gtgagcaacttctacgagaactacgagaccagacggtactgcacctcctccgacgtggcg
gcccactactgccggaaatacaacatccagtaccaagagaacttctacgcgtggagcacc
cccggggtcggcaggttcgtgacctccatggctgcctcagggtttgcctgcctcaccctg
ctcttcctcgtggaggcaggcctgctgtggaggctgaagacctgcctgtgtgccttccag
aggaggcgggcactgacagaattgtacccccggacggcggcgctacctgaagaccaggac
gtgacggacgaaaggaaccgcatcctgtcccccaacctggactccctgctggacacgcct
ctgatcatcaaggagctctccaaggtgtacgagcagcgggcgccgctcctcgccgtggac
aaggtgtccctcgcagtgcagaaaggggagtgcttcggcttgctgggcttcaacggagcc
gggaaaaccacgactttcaaaatgctgaccggggaggaaaccatcacctctggggacgcc
tttgttgggggctacagcatcagctctgacatcgggaaggtgcggcagcgaatcggctac
tgtccccagttcgatgccctgctggaccacatgacgggccgggagacactggtcatgttc
gcccggctccggggcatccccgagcgccacattggcgcgtgcgtggagaatgcgctgcgg
ggtctgctcctggagccgcacgccaacaagctggtcaggacgtacagcggtggcaacaag
cgcaagctcagcaccggcattgccctgctgggagagcccgcggtcatcttcctggacgag
ccatccactggcatggaccctgtggcccggcgtctgctctgggacactgtggcacgggcc
cgagagtctggcaaggccatcgtcatcacctcccacagcatggaggagtgtgaagccctg
tgcacccggctggccatcatggtgcagggtcagttcaagtgcctgggcagcccacagcac
ctcaagagcaagtttggcagtggctactccctgcgggccaagatccggagtgacgggcag
caggaggccctggaggagttcaaggcgttcgtgggcctgaccttcccaggcagcgtcctg
gaggatgagcaccaagggatggtccattaccacctgcccggcgatggcctcagctgggcg
aaggtgtttggcgttctggagaaggccaaagagaagtacggagtggacgactactccgtg
agccagacctcattggagcaggtcttcctgagcttcgcccacctgcagccacccaccgag
gacgcgggtccgtga
DBGET
integrated database retrieval system
