Capra hircus (goat): 102173460
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Entry
102173460 CDS
T02910
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
chx
Capra hircus (goat)
Pathway
chx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102173460 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102173460 (CNOT3)
Messenger RNA biogenesis [BR:
chx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102173460 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102173460 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
Motif
Other DBs
NCBI-GeneID:
102173460
NCBI-ProteinID:
XP_017918905
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Position
18:complement(64820238..64836160)
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AA seq
745 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPVHSSQHPQSPAVPPSYPPGPQPAASALSAAPGSNGAPAVAAPASTLGTKASP
APSHSAGTPAPYAQAVAPPAPSGPPSTQPRPPSAQPGAGGAGGGNSGGGGGAGKQNGATS
YSSVVADSPAEAALSSTGGSSTGSQALGPPPGPHNPPPSTAKEPSATAPVGAGGVAPGSG
NNAGGPSLLVPLPVNPPSSPTPSFSEAKAAGSLLNGPPQFSATPEIKAPEPLSSLKSMAE
RAAISSGIEDPVPTLHLTERDILLSSTSAPPASAQPPLQLSEVNIPLSLGVCPLGPVPLT
KEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQRLST
ETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFD
YEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgaccgctgcctcaagaaggtgtccgag
ggcgtggagcaatttgaagatatttggcagaagctccacaatgcagccaacgcgaaccag
aaagaaaagtatgaggctgatctaaagaaggagattaagaagcttcaacggctgagggac
cagatcaagacatgggtagcatccaacgagatcaaggacaagaggcagctcatagacaac
cgcaagctcattgagacgcaaatggaacggttcaaagtcgtggagcgagagaccaagacc
aaagcctacagcaaggagggcctgggcctggcacagaaggtggaccctgcccagaaggag
aaggaggaggtcggccagtggctcacgaacaccatcgacaccctgaacatgcaggtggac
cagtttgagagcgaagtggagtccctgtcggtgcagacgcgcaagaagaagggtgacaag
gatcagaagcaggaccgcatcgagggcctgaagcggcacatcgagaagcaccgctatcac
gtgcgcatgctggagaccatcctgcgcatgctggacaacgactccatcctggtggacgcc
atccgcaagatcaaggacgacgtcgagtactacgtggactcgtcccaggaccccgacttc
gaggagaacgagttcctctacgacgacctggacctcgaggacattccacaggcgctggtc
gccacctccccccccagccacagccacatggaggacgagatcttcaaccagtccagcagc
acgcccacctcgaccacctccagctcgcccatcccgcccagcccagccaactgcaccacg
gaaaactcggaagatgacaagaagagggggcgctcaacggacagtgaagtcagccagtct
ccagccaaaaatggctccaagcctgtccacagcagccagcaccctcagtccccggctgtg
ccgcccagctacccgcccggcccccagccggccgcctccgccctgagcgccgcccctggc
agcaacggggccccggctgtggctgcccccgcgagcaccctgggcaccaaggccagcccg
gcgcccagccacagtgcgggcacccctgccccctacgcacaggctgtggccccgccggcc
cccagcgggccccccagcacccagccccggccccccagcgcccagcctggggcgggaggc
gccggtgggggcaacagtggcggaggcgggggcgccggcaagcagaacggtgccaccagt
tacagctcggtggtggcagacagcccggcggaggcagcgctcagcagcacggggggcagc
agcacgggcagccaggccctgggccccccgcctggcccccacaacccaccccccagcacc
gcgaaggaacccagtgccacagccccagtgggtgccgggggcgtggctccaggctcaggg
aacaacgcagggggacccagcctcctggtgccactccctgtgaacccccccagctcccca
acgcccagcttcagtgaggccaaggccgctggcagcctgctgaacgggcctccgcagttc
agcgccacacccgagatcaaggcccccgagcctctgagctcgctgaagtcgatggcggag
cgtgcggccatcagctctggcatcgaagaccccgtacccacgctacacctgactgagcga
gacatcctcctgagcagcacatcagcgcccccggcctcggcccagccccccctgcagctg
tcggaggtgaacatcccgctttcactgggcgtgtgtccgctgggcccggtgcccctcacc
aaggagcagctctaccagcaggccatggaggaggccgcctggcaccacatgccccacccc
tcagactcggagcgcatccggcagtacctgccccggaacccctgtccgacgcccccctac
caccaccagatgccacccccacactcggacaccgtggagttctaccagcgcctgtccacc
gagacgctcttcttcatcttctactatctggagggcacgaaggcgcagtacctggcggcc
aaggccctgaagaagcagtcctggcggttccacaccaagtacatgatgtggttccagagg
cacgaggagcccaagaccatcacagacgagttcgagcagggcacctacatctactttgac
tacgagaagtggggccagcggaagaaggaaggcttcacctttgagtaccgctacctggag
gaccgggacctccagtga
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