Capra hircus (goat): 102173564
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Entry
102173564 CDS
T02910
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X2
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
chx
Capra hircus (goat)
Pathway
chx00100
Steroid biosynthesis
chx01100
Metabolic pathways
Module
chx_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
102173564 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
chx01006
]
102173564 (FDFT1)
Enzymes [BR:
chx01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
102173564 (FDFT1)
Prenyltransferases [BR:
chx01006
]
Terpene biosynthesis
Squalene/phytoene synthase
102173564 (FDFT1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
Motif
Other DBs
NCBI-GeneID:
102173564
NCBI-ProteinID:
XP_005683583
UniProt:
A0A452FY30
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Position
8:complement(7451908..7479982)
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AA seq
417 aa
AA seq
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MEFVKCLGHPEEFYNLLRFQMGGRRKVIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQA
LDGEMRHAVCIFYLVLRALDTLEDDMTISIERKVPLLHNFHSYLYEPDWRFTESKEKDRQ
VLEDFPTISLEFRNLAKKYQTVIVDVCQKMGFGMAEFLDKRVTSEREWDKYCHYVAGLVG
IGLSRLFSASELEDPLIGEDTERANSMGLFLQKTNIIRDYLEDQREGREFWPQETWSKYV
KKLGDFAKPENIDFAVQCLNELITNALHHIPDVITYLSRLRNQSIFNFCAIPQVMAIATL
AACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIHQYMEEIYHRIPTSDPCSTKTR
QIISTIRTQNLPNCQLVSRSHYSPIYLSFVMLLAALSWQYLSTLSQVTEDYVQTGEH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgtgaagtgcttggggcaccctgaggagttctacaaccttctgcgcttccag
atggggggccggcggaaggtgatacccaaaatggaccaggactcgctcagcagcagcttg
aaaacttgctacaagtacctgaatcagaccagtcgcagtttcgcagctgttatccaggcg
ctggatggagaaatgcgccacgcagtatgcatattttatctggttctccgagctttggac
acgctggaagatgacatgaccatcagcatagaaagaaaagtgccactgctacacaacttc
cactcatacctctatgagcctgactggcggttcacggagagcaaggaaaaggaccggcaa
gtcctggaggactttccaacgatctccctggagtttcgaaatctggctaagaaatatcaa
acagtgattgttgacgtttgccagaagatgggctttgggatggcagagtttctggataag
cgcgtgacgtctgaacgggagtgggacaagtactgtcactatgttgctgggctagtggga
attggcctctcccgtctcttctcggcctcagagttagaagaccccttaattggtgaagac
acagagcgagccaactctatgggccttttcctgcagaaaacaaacatcatccgtgattat
ctggaagaccagcgagaaggaagagagttttggcctcaggagacttggagcaagtatgtg
aagaagctgggtgactttgctaagccagagaacatcgacttcgctgtgcagtgtctgaac
gaactcatcaccaacgcactgcaccacatccccgacgtcatcacctacctgtcacgactt
agaaaccagagtatatttaacttctgtgctattccacaggtcatggccattgctactttg
gctgcctgttacaataatcagcaggtgttcaagggggtggtgaagattcggaaagggcaa
gcggtcaccctgatgatggatgccaccaacatgccagctgtaaaagccataatacaccag
tacatggaagagatttatcacagaattcccacctctgacccctgctccactaaaacacgg
cagatcatctccaccatcaggacacagaatctccccaactgtcagctggtctcacggagc
cactactcgcccatctacctgtcattcgtcatgctcctggcggccctgagctggcagtac
ctgagcaccctgtcccaggtcacagaggactacgttcagacgggggagcactga
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