Capra hircus (goat): 102173607
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Entry
102173607 CDS
T02910
Name
(RefSeq) regulator of nonsense transcripts 3B-like isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
chx
Capra hircus (goat)
Pathway
chx03013
Nucleocytoplasmic transport
chx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102173607
03015 mRNA surveillance pathway
102173607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102173607
Messenger RNA biogenesis [BR:
chx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
102173607
mRNA cycle factors
P-body specific factors
102173607
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
102173607
NCBI-ProteinID:
XP_017921142
LinkDB
All DBs
Position
1:56916168..56918068
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AA seq
470 aa
AA seq
DB search
MKEEKEHMPKEKRVTLLTPPGATGSGGGASGDSTKGEDKQDRNKEKKEALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYAADNEKMTSTPET
LLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIDRVPERDKLKDEPKIKLLKKPEKGDEKELDKREKLKKLDKENLSDER
ASGQSCTLPKRSEGEFKDEKPKRPEDESGREYRERERDYDRDQERILRERERLKRQEEER
RRQKERYEKEKAFKRKEEEMKKEKEALRDKGKKPESTEPVGSSEKTEKKEEVVKRDRIRN
KDRPAMQLYQPGARSRNRLCPPDDSTKSGDSAIEKKQESGISHRKEGSEE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggagaaggagcacatgcctaaggagaagcgagtaaccctcttgactccccca
ggtgctacaggcagcggcggtggggcttcgggagacagcaccaaaggggaagataagcag
gatcggaacaaggagaagaaagaggcgttgagcaaggtggtaattcggagattaccgccc
actttgaccaaggagcagcttcaggaacatcttcagcctatgcctgagcatgattatttt
gagtttttttctaatgatactagtttgtatcctcatatgtatgcaagagcatacatcaac
tttaaaaaccaagaggacattattttgttcagggatcgttttgatggttatgtattcctt
gacaataaaggtcaggaatatcctgccatcgtagaatttgcaccttttcaaaaagctgca
aaaaagaagactaagaaaagagatactaaagttggaactattgatgatgatccagaatat
agaaaatttttggagagctatgctgcagataatgagaaaatgacatctactccagagaca
ctgctagaggaaatagaagcaaaaaatagagaactaatagctaaaaagacaactccactt
ttgagcttcctgaaaaacaagcagaggatgagagaagaaaagagagaagaaaggaggcgg
cgagaaatagaaagaaaaagacaaagagaagaagagaggagaaagtggaaagaagaagag
aaacgaaaacggaaagatatagaaaagctaaagaagatagacagagttccagaaagggac
aaattaaaggatgaaccaaagattaagctgctcaagaagccagaaaaaggagatgaaaaa
gaattggacaaaagagaaaagctcaagaaattggacaaagagaatctgagtgatgaaaga
gccagtgggcaaagttgtacattgcccaagcgttctgagggtgaatttaaagatgaaaag
cctaagagacctgaagatgagagtggcagagaatacagggagagggagcgggattatgat
cgagaccaagagcgcatcctgcgggagagagagaggctgaagcggcaggaagaagagcgc
cggaggcagaaggagcgctatgagaaagagaaggctttcaagagaaaggaagaagaaatg
aagaaggagaaagaagcacttcgggataaaggaaagaagcctgaaagtacagagccagta
ggcagctcagaaaaaactgaaaagaaagaagaagtggttaagagagatcgcataagaaac
aaggatcgcccggcgatgcagctttaccagccaggagctcgaagccgaaatcgactctgt
ccccctgatgacagcaccaagtccggagattcagccatagaaaaaaagcaggaaagtggt
attagccatagaaaagaaggaagcgaggagtga
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