KEGG   Capra hircus (goat): 102173685
Entry
102173685         CDS       T02910                                 
Symbol
PER1
Name
(RefSeq) period circadian protein homolog 1 isoform X1
  KO
K21944  period circadian protein 1
Organism
chx  Capra hircus (goat)
Pathway
chx04710  Circadian rhythm
chx04713  Circadian entrainment
Brite
KEGG Orthology (KO) [BR:chx00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    102173685 (PER1)
   04713 Circadian entrainment
    102173685 (PER1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:chx03400]
    102173685 (PER1)
DNA repair and recombination proteins [BR:chx03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    102173685 (PER1)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 102173685
NCBI-ProteinID: XP_017920099
LinkDB
Position
19:complement(27513654..27529113)
AA seq 1299 aa
MSRSGPLEGADGGGDPRPGEPFCPGGGPSPGPPEHRPCPGPSLADDTDANSNGSSGNESN
GPESRGASQRSSHSSSSGNGKDSALLETTESSKSTNSQSPSPPSSSIAYSLLSASSEPDN
PSTSGCSSEQSARARTQKELMTALRELKLRLPPERRGKGRSGTLATLQYALACVKQVQAN
QEFYQQWSLEEGEPCAMDMSTYTLEELEHVTSEYTLRNQDTFSVAVSFLTGRIIYISEQA
GVLLRCKRDVFRGARFSELLAPQDVGVFYGSTTPSRLPTWGPGASAGSDLKDFTQEKSVF
CRISFIIGVGHRDSPDRLWRPGGSGESCGGNHLPASLGLRQHTEGPGAGAFCLRSNGHAS
CASAPRIPPDKRIFTTRHTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLML
AIHKKILQLAGQPFDHSPIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPL
NEDVFTPPAPSPTLSLDSDIQELSEQIHRLLLQPVHSPSPTGLCGVGPVPSSGPLLSPGS
SSDSNGGDAEGPGPPAPVTFQQICKDVHLVKHQGQQLFIESRARPLTRPRVPATGTFKVK
TLPCQSLELEAAPAPIQAPVALAAEEAERKEASSCSYQQINCLDSILRYLESCNLPGTAK
RKCASSSSCTASSASDDDKQRAGPVSVGAKKDPSAVLPGEGATPLKEPVVGGGALSPLAL
ANKAESVVSVTSQCSFSSTIVHVGDKKPPESDIIMMEDLPSLPPGPAPSPAPSPTVAPDP
APDAYRPVGLTKAVLSLHTQKEEQAFLSRFRDFSRLRGLDSSSTAPSAPGERGCHHSPAT
PGRRHHCRSKAKRSRHHQTARAEAPSYISQPSPVPPSAPWPPPPATPPFPAVVQPYPLPV
FPPRGSPQPLPPAPTSVPPAAFSAPLVTPMVALVLPNYLFPTPSTYPYGAPQTLAEGPLT
PASRSPSPSLPPLPPSPPHRPNSPLFNSRCSSPLQLNLLQLEEPPRGEGGAAAGGSGSSA
GPPPPSEETAEPEARLAEVTESSNQDALSGSSDLLELLLQEDSRSGTGSAASGSLASGLG
SGSGSHEGGSTSASITRSSQSSHTSKYFGSIDSSEAEAGAAQARAEPGDQVIKYVLQDPI
WLLMANADQRVMMTYQVPSRDMASVLKQDRERLRAMQKQQPRFSEDQRRELGAVHSWVRK
GQLPRALDVMACVDCGSSTQEPGHPDDPLFSEVDGLGLEPMEEGGGEGGGSGGEGEGSSG
AQAQAGARVSSSQDLAMEEEEQGGSSPSPALPATENGTS
NT seq 3900 nt   +upstreamnt  +downstreamnt
atgagcaggagcggccccctagaaggggctgatgggggaggggaccccaggccaggggaa
cccttttgtcctggagggggtccatcccctgggcctccagagcaccgaccttgtcctggc
cccagcttggctgatgacacggatgccaacagcaatggctctagcggcaatgagtcaaat
ggacccgagtccaggggtgcatctcagcggagttcgcacagctcctcctccggcaatggc
aaggactcagccctgctggagaccactgagagcagcaagagcacgaactctcagagccca
tccccacccagcagttccattgcctacagcctcctgagtgccagctctgagccagacaac
ccttctaccagtggctgcagcagtgaacagtcagctcgggcaaggactcagaaagaactc
atgacggcactgcgagagctcaagcttcggctgcccccggagcgaaggggcaagggccgc
tccgggactctggccacactgcagtacgcgctggcctgtgtcaagcaggtgcaagccaac
caggagttctaccagcaatggagcctggaggagggcgaaccgtgtgccatggacatgtcc
acctatactctggaggagctggagcacgtcacgtctgagtacacactccgcaaccaggac
accttctccgtggctgtctccttcctgacaggccgcatcatctacatttccgagcaggcg
ggtgtcctgctgcgctgcaagcgggacgtgttccggggcgcccgcttctccgagctcttg
gctccccaggatgtgggtgtcttctacggttccaccaccccatcccgcctgcccacctgg
ggcccgggggcctccgcaggttcagacctcaaggacttcacccaggagaagtctgtcttc
tgtcgtatcagtttcattattggcgtggggcacagagatagtccagaccgtctctggagg
ccagggggctcaggggagagctgtggagggaatcatctgccagccagcctaggcctgagg
cagcacacggagggcccgggtgctggagcattctgcctgagatccaatggccacgcctcc
tgtgcctcagctccccggatcccccctgacaagaggatcttcaccacacggcacacgccc
agctgcctcttccaggatgtggatgagagggccgccccgctgctgggctacctcccccag
gacctcctgggggccccagtgctcctcttcctgcatccggaggaccgacccctcatgctg
gccattcacaagaagatcctgcagctggctggccagccctttgaccactcccctattcgc
ttctgtgcccgtaatggggagtatgtcactatggacaccagctgggctggcttcgtgcac
ccctggagccgcaaggtggcctttgtgttgggccgccacaaagtacgcacggcgcccctg
aatgaagatgtattcactcccccggcccccagccccactctgtccctggactctgacatc
caagagctctcggagcagatccaccggttgctgttacagcctgtgcacagccccagcccc
acgggcctctgtggagtcggccccgtgccttcctctggccctctcctcagccctggctcc
tccagtgacagcaacgggggtgatgccgagggacctgggcctcctgccccggtgaccttc
cagcagatctgtaaggatgtgcacctggtaaagcatcaggggcagcagctttttattgag
tcccgggcccggcctctgacccggccccgtgtccctgctactggcacattcaaggtcaag
acccttccctgccaatccctagagctggaggcagccccggctccaatccaggccccagtg
gccttggccgctgaggaggctgagcggaaagaagcctccagttgctcctaccagcagatc
aactgcctggacagcatcctcaggtacctggagagctgcaacctccccggcaccgcaaag
cgcaaatgtgcgtcctcctcttcctgcactgcctcttcggcgtccgacgacgacaagcag
cgggcaggcccagtctctgtgggtgccaagaaagatccatcagcagtgctgcctggggag
ggggccacccctctgaaggagccggtggtgggaggaggagccctgagcccgctcgccctg
gccaataaggcggagagcgtggtgtccgtcaccagtcagtgtagcttcagctccaccatc
gtccatgtgggagacaagaagcccccggagtcggacatcatcatgatggaggacctgccc
tccttgcctcccggtccagctcccagccctgcccctagccccacagtagcccctgatccg
gccccagacgcctaccgcccagtgggcctgaccaaggccgtgctgtccctgcacacacag
aaggaggagcaggccttcctcagccgcttccgcgacttcagtaggctgcgtggattggac
agctcctccacagccccctcggcccctggggagcgaggctgccaccacagccctgccacc
cccggccgccgccaccactgccgatccaaagccaagcgctcacgtcaccaccagacagct
cgggccgaagcccctagctacatctcccagccctcgcctgtgccaccctctgccccctgg
cccccaccaccagccactcctcccttcccagctgtggtccagccataccctctccctgtc
ttccccccaagaggcagccctcagcctctccctcctgctcccacgtctgtgcctcctgca
gctttctctgcccccctggtgacccccatggtggccttggtgctccctaactatctgttc
cctaccccatctacctacccctacggggcaccccagacgcttgccgaggggcctcttacc
cctgcctcccgctccccatctccatccctgcccccgctgccccccagccctccccaccgc
cccaactctccgctcttcaactcaagatgcagctccccactccagctaaacctgttgcag
cttgaggagccccctcgcggtgaggggggtgcagcggcagggggctctgggagcagtgct
gggcccccccctcccagcgaggagacggcggaaccagaggccagactggcggaggtaact
gagtcctccaaccaggacgctctctcaggctccagtgacctgctggagttgctgctacaa
gaggactctcgatctggcacgggctctgctgcctcaggctccttggcctccggcttgggc
tctggttcaggctcccatgaggggggcagcacttctgccagcatcacgcgcagcagtcag
agcagccacacgagcaagtacttcggcagcatagattcttcagaggctgaggctggggct
gcccaggccagggctgagcctggggaccaggtcattaagtacgtgctccaggatcccatc
tggctgctcatggctaatgctgaccagcgtgtcatgatgacttatcaggtgccctccagg
gacatggcctctgtgctgaagcaggaccgggagcggctccgggccatgcagaagcagcag
cctcggttctcggaggaccagcggagggaactgggtgctgtgcactcctgggtccggaaa
ggtcaactccctcgggcccttgatgtgatggcctgtgtggactgcggtagcagcacccaa
gagcctggccatcctgatgaccctctcttctcggaagtggatggactggggctggagccc
atggaggagggtggaggcgagggtggtggcagtggtggtgagggtgagggcagcagtggg
gcccaggcgcaagctggggccagggtctcgagctctcaggacctggccatggaagaggag
gagcaaggtgggagctcacccagtccagccttacctgccacagaaaatggcaccagctag

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