Capra hircus (goat): 102173941
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Entry
102173941 CDS
T02910
Symbol
SIX4
Name
(RefSeq) homeobox protein SIX4 isoform X1
KO
K15615
homeobox protein SIX4
Organism
chx
Capra hircus (goat)
Pathway
chx05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
102173941 (SIX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
chx03000
]
102173941 (SIX4)
Transcription factors [BR:
chx03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
102173941 (SIX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
Motif
Other DBs
NCBI-GeneID:
102173941
NCBI-ProteinID:
XP_005686158
UniProt:
A0A452EBD2
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Position
10:30304829..30317343
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AA seq
784 aa
AA seq
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MSSSSPTGQIASAADIKQENGMESASEGQEAPREVAGGAAAAAGLSPPAPAPFPLEPGDA
AAAAARVSGEEGAVAAAAGAAVDQVQLHSELLGRHHHAAAAAAAQTPLAFSPDHVACVCE
ALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPELYSILESHSFESAN
HPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNAL
KELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPSTED
ESSKGHEDLSPHQLSSSSDGVTNLSLSSHLEPVYMQQIGNAKISLSSSGVLLNGSLVPAS
TSPVFLNGNSFIQGPNGVILNGLSVGNTQTVSLNPPKMASNIMSNGISMTDILGSTSQDV
KEFKVLQSSSANSAASTSYSPSAPVSFPGLIPSAEVKREGIQTVASQDGGSVVTFTTPVQ
INQYGIVQIPNSGANSQFLNGSIGFSPLQLPPVSVAASQGNISVNSSTSDGSTFTSESAT
VQQGKVFLSSLAPSAVVYTVPNSGQTIGSVKQEGVERSLVFSQLMPVNQNAQVNANLSSE
SISGSGLHPLSSSLVNVSPAHNFSLTSPTLLNPTELNPDIADSQPMSAPVASKSTVTSVN
NTNYATLQNCSLISGQDLLSVPLTQAALGEIVPTGEDQVGHPSPTVHQDFVREHHLVMQS
VANIKENFLTNSESKTTSNLMMLDSKSKYVLDGMVETVCEDLETDKKELAKLQTVQLDED
MQDL
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcctcccccaccgggcagattgcaagtgcggcggacatcaagcaggagaat
gggatggaaagcgcctcggaggggcaggaggcgccccgagaagtggcggggggcgcggcg
gcggcggcggggctgagccccccggctccagcccctttccccctggagccgggggacgcc
gcggccgccgccgccagggtgagcggagaggaaggggcagtggcggcggcggccggggcg
gcggtggatcaggtacaactccactcggaacttctgggcaggcaccaccacgccgcggca
gccgccgccgcgcagaccccactggccttctcgcccgaccatgtcgcctgcgtgtgcgag
gcgctgcagcaggggggcaacctggaccgcctggcccggttcctgtggtccctgccccag
agcgacctgctacgtggcaacgagagcctgctgaaggcgcgggcgctggtggccttccac
cagggcatctaccccgagctctacagcatcctcgagagccacagcttcgagtcggctaac
cacccgctgctgcagcagctctggtacaaggcgcgctacaccgaggccgagcgagcccgc
ggccggccgctgggcgcggtggacaagtaccggctgcgcaggaaattccccctgccccgc
accatctgggacggcgaggagacggtgtattgtttcaaggagaagtcgcgcaacgcgctc
aaggagctctacaagcagaatcgctacccttcgcccgccgagaagcggcacctggccaag
atcaccggcctctccctcacccaggtcagcaactggttcaagaaccgtcggcagcgcgat
cggaacccctccgagacccagtccaaaagtgagtcagatggcaatcctagcactgaagat
gaatccagcaagggtcatgaagacttgtctcctcatcaactctccagttcatccgatggt
gtcaccaacctcagcctttccagtcacctggagccagtatatatgcaacaaattggaaat
gctaaaatatcgttaagctcctctggagttttattgaacggaagtttggtacctgcaagt
acttcacctgtcttccttaatggtaattctttcattcagggacccaatggagttatcctt
aatggattaagtgtgggaaatacacagacagtatctttgaacccaccaaaaatggcatca
aacattatgagcaatggtatatccatgactgacatactggggtctacctcccaggatgtg
aaggaattcaaagttctccagagctcttcagcgaactcagcagccagcacctcctatagc
cctagtgctcccgtgtcgttcccaggactgatacccagcgctgaggtgaaaagagaaggt
attcaaacagtagcttcccaggatggaggctctgtggtgacttttaccacaccagtgcaa
attaaccagtatggcatcgtccagatccccaattctggagcaaacagccagttccttaat
gggagcattggattctctccactgcagctgcctcctgtttcagtggcagcttcacaaggt
aatatttcagtaaattcaagcacttcagatgggagcacatttacaagtgagtctgccaca
gtccaacaaggaaaggttttcttgagctctcttgctcccagtgcagtggtatacactgtt
cctaattcaggccagactataggatctgttaaacaggagggcgtggagaggagcctggtg
ttttctcagttgatgcctgtcaatcagaatgcgcaagtaaatgcaaacctatcttctgaa
agtatctccggaagtggcctccacccactgtcctcctcattagttaatgtatccccagct
cacaacttctccctgacttccccaaccctactaaatcccactgagctaaaccctgacatt
gctgatagccagccaatgtctgcacctgtggcaagcaaatctactgtgacgtcagtcaac
aacactaactatgcaactcttcagaactgctcccttatttctggtcaagatctactatca
gtacccttgacccaggctgcccttggggaaatagttcccacaggtgaagaccaggtgggt
cacccctccccaacagtacaccaggattttgtcagagaacatcatttagttatgcaatca
gtagctaacataaaagaaaatttcttaacaaattctgagagcaaaacaacaagcaactta
atgatgctggactccaaatccaagtatgtcctagacggcatggtggagactgtctgtgaa
gacctggaaacagacaagaaagagcttgccaagctccagactgtccaattggatgaagat
atgcaagacttgtga
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