Capra hircus (goat): 102174228
Help
Entry
102174228 CDS
T02910
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chx03021
]
102174228 (CTR9)
Transcription machinery [BR:
chx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
102174228 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
TPR_Slam
ARM_TT21_4th
TPR_9
ANAPC3
TPR_EMC2
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
102174228
NCBI-ProteinID:
XP_005689737
UniProt:
A0A452EA66
LinkDB
All DBs
Position
15:40442230..40466884
Genome browser
AA seq
1173 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEEF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSD
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVV
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGETEATKE
KKRGGGGGRRSKKGGEFDEFVNDDTDEDLPVSKKKKRRKGSGSEQEGEEEEGGERKKKKR
RRPPKGDEGSDDDETENGPKPKKRRPPRAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADEGHPRNSHSNSDSDEGEPRKKGASSESDSEENQNKSGSEAGSPRRSRRSH
SDEDSDSDQPARKRRPSGSEQSDNESLRSGRSRSAGSEMDSRPASPSAESDHDSERASDN
EGSGPGSGNESEPEGSNNEASDRGSERGSDDSD
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctctattgagattccccttcgggacactgacgaggtcattgaacttgat
tttgatcagttaccggagggagatgaagttatcagtattctgaaacaggaacacacacaa
ctgcacatatggattgctttggcgctggaatactacaagcaagggaaaacagaagagttt
gtcaagttgttggaagcagcgcgtatagatggcaatttggattatagagaccatgaaaaa
gaccagatgacttgcttggatacattggcagcctattatgttcaacaggctcgtaaggaa
aagaataaggacaacaagaaggatcttattacacaggcaaccctattgtatacaatggca
gataaaattattatgtatgatcagaaccatttgttaggaagagcctgcttctgccttctt
gaaggtgacaaaatggatcaagctgatgcacagtttcattttgtacttaaccagtctcca
aataatattccagcactgcttggtaaagcttgcatttcgttcaacaagaaggattacaga
ggcgctctagcttactataagaaagccttgcggactaacccaggttgtccagcggaggtt
cgtttaggaatgggccattgctttgtgaaacttaacaaactggagaaagctcgtctggca
ttcagcagagccctggaactcaattccaagtgtgtgggagcattggtgggactggctgtt
ctagaactcaataataaagaggctgattccatcaaaaatggtgtccagcttctttccaga
gcctatactattgatcctagcaaccctatggtattgaaccacttagcaaatcactttttc
ttcaaaaaggattacagtaaagtccagcacttggctctccatgcattccataatacagaa
gtggaggccatgcaagcagaaagttgctatcagttggctagatcattccatgtccaggaa
gattatgaccaagctttccaatactactatcaagccacacagtttgcctcatcctctttt
gtgctgcctttttttggtttgggacaaatgtacatttatcgaggtgacaaagagaatgca
tctcagtgctttgagaaagttttgaaagcttatcctaataattatgaaactatgaaaatt
cttggctctttatatgctgcttcagaagaccaagaaaaaagagatattgccaagggccat
ttgaagaaggtcacagaacagtatcctgatgatgttgaagcttggattgagttggcacag
atcttagaacagactgatatacagggtgccctgtcagcctacggaacagcaacacgcatc
cttcaggagaaagtgcaggccgatgtccccccagagattctgaataacgtgggtgccctt
cacttcagacttggaaatctgggtgaggcaaagaaatactttttggcatctttggatcgt
gcaaaggcagaagctgagcatgatgaacattattataacgccatttctgttacaacgtca
tacaatttagccaggctgtatgaggcgatgtgtgaattccatgaagctgaaaaactatat
aaaaacatcttacgggaacatcctaattatgttgactgctatctgcgcctaggagcaatg
gctagagataaaggaaacttttatgaggcttcagattggtttaaggaagctcttcagatt
aatcaggaccatccagatgcttggtctttgattggtaatcttcatttagcaaaacaagaa
tggggtccaggccagaagaaatttgagaggatattaaaacaaccagctactcagagtgac
acttattctatgctggcccttggcaacgtctggcttcaaactttgcatcagcccacccga
gatagagaaaaggaaaagcgtcatcaggatcgtgctctcgctatctataaacaagtactc
agaaatgatgcaaagaatctatacgctgctaatggcataggagctgtcttggcccacaaa
ggatatttccgtgaagctcgtgatgtatttgcccaagtaagagaagcaacagcagatatc
agtgatgtgtggttgaatctagcacacatctacgtggaacaaaagcaatatatcagtgct
gttcagatgtatgaaaactgcctcagaaagttttataagcaccagaacacagaagttgtg
ctgtatttggcccgggccctcttcaaatgtggcaagttacaggaatgcaaacaaaccctg
ctgaaggctagacacgtggcacccagtgatacagttcttatgtttaatgtggccttggtc
ctacaaagattagctacctctgtcctgaaagatgaaaagagtaatctgaaggaagtactt
aatgctgtgaaggaactggagcttgcacacagatatttcagttacttgagtaaagtggga
gataaaatgagatttgacttggccctcgctgctacagaagccaggcaatgctctgattta
ctgagccaggcgcaataccacgtggcccgtgcacgcaaacaagacgaagaagaaagggag
ttgcgggccaaacaagaacaagagaaagaactgctaaggcagaaacttctcaaagaacag
gaagagaaacgtctcagagaaaaagaagagcaaaagaaacttttggaacagcgggcccag
tatgtagaaaagaccaaaaatattcttatgtttactggagagactgaagcaacaaaagaa
aagaaaagaggtggtggtggtggacggcgttccaagaagggaggagagttcgatgaattt
gtcaatgatgacaccgatgaggacctgcctgtctccaaaaagaagaagcgaaggaagggc
agtggtagtgagcaagaaggcgaggaagaggagggtggcgagagaaagaagaagaagagg
agaagacctccgaagggagatgaaggatctgatgatgatgaaacagaaaatggccccaaa
ccgaaaaagcgccgtcccccgagagcagagaagaagaaggctcccaagccagaacgtctg
cctccttcaatgaagggaaaaataaaatccaaagccataatatcatcaagtgatgattcg
tctgatgaagataaactgaaaattgctgatgaagggcatccccgcaacagccacagcaac
agcgactcagatgagggcgagccacggaagaagggtgcctcctcggagagcgactcggag
gagaaccagaacaagtccggcagcgaggccggcagcccccggcggtcccggagatcccac
tccgatgaggattcagacagcgaccagccggccaggaaacgcaggccctcaggctccgaa
cagtcagacaacgagtccctgcggtcagggcggagccgctccgcaggctctgagatggac
tcccggcccgcgtccccgagtgccgagtcggaccacgactcagaaagagcatctgacaat
gagggctccggcccaggttccggaaatgaatctgaacccgagggatccaacaatgaggcc
tcggataggggctcagaacgtggttcagatgatagcgactag
DBGET
integrated database retrieval system
