Capra hircus (goat): 102174636
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Entry
102174636 CDS
T02910
Symbol
SOX5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
chx03000
]
102174636 (SOX5)
Transcription factors [BR:
chx03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102174636 (SOX5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
102174636
NCBI-ProteinID:
XP_005680807
EnsemblRapid:
ENSCHIG00000026249
LinkDB
All DBs
Position
5:84043281..85187178
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AA seq
763 aa
AA seq
DB search
MLTDPDLPQEFERMSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPN
KPHSEEFQPVSLLTQETCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPQKAEEGGRQS
GESLSSTTLGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAM
GSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMEL
AKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLL
PPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKLPGV
SQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPAL
RINSGAGPLKASVPASLASPSARVSTIGYLNDHDAVTKAIQEARQMKEQLRREQQVLDGK
VAVVNSLGLNNCRTEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNMSGDSDGSAGVSES
RIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNL
EKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYF
NVGQQAQIPIATAGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEP
HIKEEIQAEDINGEIYDEYDEEEDDPDVDYGSDSENHIAGQAN
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcttactgaccctgatttacctcaggagtttgaaaggatgtcttccaagcgaccagcc
tctccgtatggggaagcagatggagaggtagccatggtgacaagcagacagaaagtggaa
gaagaggagagtgacgggctcccagcctttcaccttcccttgcatgtgagttttcccaac
aagcctcactctgaggaatttcagccagtttctctgctgacgcaagagacttgtggccat
aggactcccacttctcagcacaacacaatggaagttgatggcaataaagttatgtcttca
tttgccccacacaactcatctacctcacctcagaaggcagaagaaggtgggcgacagagt
ggcgagtccttgtctagtacaaccctgggaactcctgaaaggcgcaaaggcagcttagct
gatgttgttgacaccttgaaacagaggaaaatggaagagctcatcaaaaatgagccagaa
gaaacccccagtattgaaaagctactctcaaaagactggaaagacaagcttcttgcaatg
ggatcagggaactttggtgaaataaaagggactcctgaaagcctagctgagaaggagagg
cagctcatgggtatgatcaatcagctaaccagtctgcgagagcagctgctggctgcccat
gatgagcagaagaaactggctgcgtctcagattgagaaacagcgccagcaaatggagctg
gccaagcagcagcaagaacagatcgcaagacaacagcagcaacttctgcagcaacaacac
aaaatcaatttgcttcagcagcagatccaggttcaaggtcaactgccgccattaatgatt
cccgtattccctcctgatcaacggacactggctgcagctgcccagcaaggattcctcctt
cctccaggcttcagctataaggctggatgtagtgacccttaccctgtacagctgatccca
actaccatggcagctgctgccgcggcaacaccaggcttaggcccactccaactgcagcag
ttatatgctgcccagctagctgcaatgcaggtatctccaggaggaaagctcccaggcgta
tcccaaggcaaccttggtgctgctgtatctcctaccagcattcacacagacaagagcaca
aacagcccaccacccaaaagcaaggatgaagtggcacagccactgaacctatcagctaaa
cccaagacctctgatggcaaatcacccacatcacccacctctccccatatgccagctctg
agaataaacagtggggcaggccccctcaaagcctctgtcccagcatcattagctagtcct
tcagccagagttagcacaataggttatttaaatgaccatgatgctgtcaccaaggcaatc
caagaagctcggcagatgaaggagcagctccggcgggaacagcaggttcttgacgggaag
gtggctgttgtgaatagtctaggtctcaataactgccggacagaaaaggaaaaaacaaca
ctggagagtctgactcagcaactggcggtcaaacagaatgaagaaggaaaatttagccat
gccatgatggatttcaatatgagtggagattctgatggaagtgctggagtctcagaatca
agaatttatagagaatccagggggcgtggtagcaatgaaccccacataaaacgtccaatg
aatgccttcatggtgtgggctaaagatgaacgaaggaaaatccttcaagcctttcctgac
atgcacaactccaacatcagcaagatactgggatctcgctggaaagctatgacaaaccta
gagaaacagccatactacgaggagcaagcccgtctcagcaagcagcacctggagaagtac
cctgactacaagtacaagcccaggccgaagcgcacctgcctggtggatggcaaaaagctg
cgcattggggaatacaaggcaatcatgcgaaaccggcggcaggaaatgcggcagtacttc
aatgttgggcaacaagcacagatccccatcgcgacggctggcgtcgtgtacccaggagcc
atcgccatggctgggatgccctcccctcacctgccctcggagcactccagcgtgtccagc
agcccagagcccggcatgcctgttatccagagcacgtatggtgtgaaaggagaggagcca
cacatcaaagaggagatccaggctgaggacatcaacggagaaatttatgatgagtacgac
gaggaagaggatgatccggatgtagattatgggagtgacagtgaaaaccatattgccgga
caagccaactga
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