Capra hircus (goat): 102174819
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Entry
102174819 CDS
T02910
Symbol
CHD4
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4 isoform X1
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
chx
Capra hircus (goat)
Pathway
chx03082
ATP-dependent chromatin remodeling
chx05165
Human papillomavirus infection
chx05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102174819 (CHD4)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
102174819 (CHD4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
102174819 (CHD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
chx03036
]
102174819 (CHD4)
Chromosome and associated proteins [BR:
chx03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
102174819 (CHD4)
Chromatin remodeling factors
NuRD complex
102174819 (CHD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
ResIII
HDA2-3
PHD-1st_NSD
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
102174819
NCBI-ProteinID:
XP_017904064
LinkDB
All DBs
Position
5:102736329..102765859
Genome browser
AA seq
1940 aa
AA seq
DB search
MASGLGSPSPCSAGSEEDDMDALLNNSLPPPHPENEEDPEEDLSEAETPKLKKKKKPKKP
RDPKIPKSKRQKKERLLLCRQLGDSSGEGPEFVEEEEEVALRSDSEGSDYTPGKKKKKKL
GPKKEKKSKSKRKEEEEEDEDDDDSKEPKSSAQLLEDWGMEDIDHVFSEEDYRTLTNYKA
FSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNPFKGSSGASVAAAAAAAVAVVESM
VTATEVAPPPPPVEVPIRKAKTKEGKGPNARRKPKGSPRVPDAKKPKPKKVAPLKIKLGG
FGSKRKRSSSEDDDLDVESDFDDASINSYSVSDGSTSRSSRSRKKLRTTKKKKKGEEEVT
AMDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ
WEAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPL
PEIPNGEWLCPRCTCPALKGKVQKILIWKWGQPPSPTPVPRPPDADPNTPSPKPLEGRPE
RQFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKN
KDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVE
IQDYDLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLD
ATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLV
SAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKE
ASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLL
TGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKA
DVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCN
HPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLD
LLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADT
VIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVR
PGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDR
NQDETEDTELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEESVDPDYWEKLLRH
HYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRGVCGRPRPPPMGRSTRAVGPAHLPSLP
PDWQDDQSDNQSDYSVASEEGDEDFDERSEAPRRPSRKGLRNDKDKPLPPLLARVGGNIE
VLGFNARQRKAFLNAIMRYGMPPQDAFTTQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGA
DGAETFADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHVNGRWSMPELAEVEENKKMSQ
PGSPSPKTPTPSTPGDTQPNTPAPAPPAEDGIKVEENNLKEEESAEAEKEVKSAPPEAAV
ECAQPPAPASEEEKVPVEPPEGEEKVEKAEVKERTEEAMETDPKGNVDVEKVEEKAAVDL
TPIVVEDKEEKKEEEEKKEVMLQNGETPKDLNDEKQKKNIKQRFMFNIADGGFTELHSLW
QNEERAATVTKKTYEIWHRRHDYWLLAGIINHGYARWQDIQNDPRYAILNEPFKGEMNRG
NFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNMSEDPSHPSMALNTRFAEVECLAESH
QHLSKESMAGNKPANAVLHKVLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNI
LSRLANRAPEPPPQQVAQQQ
NT seq
5823 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggcctgggctctccgtccccctgctccgcgggcagcgaggaggacgacatg
gatgcacttttgaacaacagtctgcccccaccccacccagaaaacgaagaggacccagaa
gaggacttgtcagaagcagagactccaaagctcaagaagaagaaaaagcctaagaaacct
cgagaccctaaaattcctaagagcaagcgccaaaaaaaggagcgtttgctcttatgccgg
cagctgggggacagctctggggaggggcccgagtttgtggaggaggaggaagaggtggcc
ctgcgctcagacagcgaaggcagcgactacacccctggtaagaagaagaagaagaagctc
ggccctaagaaggagaagaagagtaaatccaagcggaaagaggaggaggaggaggacgag
gacgacgacgactcgaaggagcctaagtcatccgctcagctcttggaagactggggcatg
gaagacattgaccatgtgttctctgaggaggattatcgcaccctcaccaactacaaggcc
ttcagccagtttgttcgacccctcattgctgccaaaaaccccaagattgccgtctccaag
atgatgatggttttgggtgcgaagtggcgggagttcagcaccaacaaccccttcaaaggc
agttctggggcttctgtggcagcggctgcagcggcggcagtggctgtggttgagagcatg
gtgacggccactgaagtggcaccgcctccaccccctgtggaggtgcctatccgcaaggcc
aagaccaaagagggcaaaggtcccaatgctcggaggaagcctaagggtagccctcgtgtc
cccgacgccaagaagcctaaacccaagaaagtagctcccctgaaaatcaagctgggaggt
tttggttccaagaggaaaagatcctcgagtgaggacgatgacttagatgtggagtctgac
ttcgacgacgccagtatcaatagctattctgtttctgatggttctactagccgcagtagc
cgcagtcgcaagaaactgcggaccacgaaaaagaaaaagaaaggcgaggaggaggtgact
gctatggatggttatgagacagaccaccaggactattgtgaggtgtgccagcaaggcgga
gagatcatcctgtgtgacacgtgtccccgcgcataccacatggtctgcttggacccggac
atggagaaggcacccgagggcaagtggagctgcccacactgtgagaaggaaggcatccag
tgggaggcaaaggaggacaattcggagggcgaggagatcctggaggaggttgggggagac
cccgaggaagaggatgatcaccacatggagttctgtcgggtctgcaaggatggcggggag
ctgctgtgctgtgacacctgtccttcctcctaccacatccactgcctaaacccccccctc
ccagagattcccaatggcgaatggctgtgtccccgctgcacgtgtccagctcttaagggt
aaagttcagaagatcctaatctggaagtggggtcagccaccatctcccacgccagtgcct
cggcccccagatgctgatcccaacactccgtcccccaagcccttggaggggcggccagag
cggcagttcttcgtcaagtggcaagggatgtcgtactggcactgctcgtgggtgtctgag
ctgcagttggagctacactgtcaagtgatgttccgaaactatcagcggaagaatgacatg
gatgaaccaccctctggggacttcggtggtgacgaggagaagagtcggaagcggaagaac
aaggaccctaaatttgctgagatggaggagcgcttctatcgctatgggataaagcccgag
tggatgatgatccaccgaattctcaaccacagcgtggacaagaagggccacgtccactac
ttgatcaagtggcgggacctcccctatgaccaggcatcctgggagagcgaggatgtggag
attcaggactacgacctgttcaagcagagctactggaatcacagggagttgatgaggggt
gaggagggacgaccaggcaagaagctcaagaaggtgaagctgaggaagttggagaggccc
cctgaaaccccaacggttgatccaacagtgaagtatgagcgccagccagagtacctagat
gctacgggtggaaccctgcacccctatcagatggagggcctgaactggctgcgcttctcc
tgggctcagggcactgacaccatcttggctgacgagatgggcctcgggaagacggtgcag
actgcagtcttcctgtactccctctacaaggagggtcattccaaaggccccttcctagtg
agcgcccctctttccaccatcatcaactgggagcgggagtttgaaatgtgggctccagat
atgtacgtggtgacctatgtgggtgacaaagacagccgtgctatcatccgagagaatgag
ttctcctttgaggacaatgccattcgtggcggcaagaaggcttcccgcatgaagaaagag
gcatctgtgaagtttcatgtgctgctgacatcctatgagttgatcaccattgacatggcc
attttgggctctattgactgggcctgcctcattgtggatgaagcccatcggctcaagaac
aatcagtctaagtttttccgggttctaaatggctactcactccagcacaagctgttgctg
acagggactccactgcagaacaatctagaagagttgttccacctgctcaacttcctcacc
cctgagaggttccacaatttggaaggcttcctggaggagtttgcggacattgccaaggag
gaccagattaaaaagctgcacgacatgctgggccctcacatgttgcggcggcttaaggct
gatgtgttcaagaacatgccgtccaagacagagctgatagtgcgtgtggagctgagcccc
atgcagaagaaatactacaagtacatcctcactcggaattttgaagcactcaatgctcga
gggggcggcaaccaggtctctctgctaaacgtggtgatggatcttaagaagtgctgcaac
cacccatatctcttccccgtggccgccatggaagcccctaagatgcctaatggcatgtat
gacggcagtgccctcatcagagcatccgggaaattattgctgcttcagaagatgctcaag
aatctcaaggagggtgggcaccgtgtcctcatcttctcccagatgaccaagatgctggac
ctgctagaggacttcttggaacacgaaggttataaatatgaacgtatcgatgggggaatc
actgggaacatgcggcaggaggccattgaccgcttcaatgcaccgggtgctcagcagttt
tgcttcctgctttccactcgagctgggggccttggaatcaatctggccactgctgacaca
gttattatctacgactctgattggaacccccataatgacatccaggcctttagcagagct
caccgtattgggcaaaataagaaggtgatgatttatcggtttgtgacccgtgcgtctgtg
gaagagcgcattacgcaggtggccaagaaaaagatgatgctgacgcatctagttgttcgg
cctgggctgggctccaagactggatccatgtccaaacaggagcttgatgatatcctcaag
tttggcaccgaggagctgttcaaagatgaggccacagatggaggaggagacaacaaagag
ggagaagacagcagtgtcatccactatgacgataaagccattgaacgactgctagaccgg
aaccaggatgagactgaagacacggagctacagggcatgaatgaatatttgagctcattc
aaagtggcccagtatgtggtgcgagaagaagaaatgggggaggaagaggaggtggaacgg
gagatcataaaacaggaagaaagtgtggatcccgactactgggagaaattgctgcgacac
cattatgagcagcagcaagaagatctggcccgaaacctgggcaaaggaaaaagaattcgt
aaacaggtcaactacaatgatggctcgcaggaggaccgaggtgtgtgtggccggccccgc
cccccacccatgggccgttccactagagcagtgggccccgctcatctgccctctctccct
ccagattggcaggacgaccagtccgacaaccagtccgattattcggtggcctcagaggaa
ggtgatgaagactttgatgaacgttcagaagctccccgtaggcccagtcgtaagggcctg
cggaatgataaagataagccattgcctcctctgttggcccgtgttggtgggaatattgaa
gttcttggttttaatgctcgtcagcgaaaagcctttcttaatgcaattatgcgctatggg
atgccccctcaggatgctttcaccacccagtggctcgtgagggatctgcgaggcaaatcg
gagaaggaattcaaggcttatgtctcactttttatgcggcatttatgtgagccaggagca
gatggggctgagacctttgctgatggcgtcccccgagaaggcctgtctcgccagcatgtc
cttactcggattggggttatgtccttgattcgcaagaaggttcaggagtttgaacacgtt
aacgggcgctggagcatgcctgaacttgcagaagtagaggaaaataagaagatgtcccag
ccagggtcaccttccccaaagactcctaccccctccactcctggggacacacagcctaat
actccagctcctgccccgcctgccgaggatgggattaaagtagaggagaataacctcaaa
gaagaagagagtgcagaagcagagaaggaggtgaagtctgcaccccctgaggccgccgtc
gagtgtgcacagccccctgcccctgcctcagaggaggagaaagtcccagtggagcctcct
gagggagaggagaaagtggaaaaggcagaggtcaaggagagaacagaggaagcaatggag
acagatcccaaaggtaatgttgatgtggagaaggtggaggagaaggcagcagtcgacctg
actcccattgtggtggaggacaaagaagagaagaaagaagaagaggagaaaaaagaggtg
atgcttcagaatggagagaccccgaaggacctgaatgatgagaagcagaagaaaaatatt
aaacagcgtttcatgttcaacatcgcagatggcggttttactgagctgcactccctgtgg
cagaatgaggagcgggcagctaccgtcaccaagaagacttatgagatctggcaccgacgc
catgactactggctactggctggcatcataaaccatggctatgcccgttggcaggacatc
cagaatgacccacgctatgccatcctcaatgaacctttcaagggggaaatgaaccgtggc
aatttcttagagatcaagaataagtttctagcccgaaggttcaagctcttagaacaagcc
ctggtgattgaagagcagctgcgtcgggcagcttacctcaacatgtcagaggacccttct
cacccttccatggccctaaacacccgctttgctgaggtggagtgtctggcagagagtcat
cagcacctgtccaaggagtccatggcaggaaacaagccagctaatgcagtcctgcacaaa
gttctgaaacagctagaagaactgctgagtgacatgaaagctgatgtgactcgactccca
gccactattgcccgaatccccccagttgctgtgaggctacagatgtcagagcgtaatatt
ctcagtcgcctggcaaaccgggcgcctgaaccacctccacagcaggtagcccagcagcag
tga
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