Capra hircus (goat): 102174895
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Entry
102174895 CDS
T02910
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
chx
Capra hircus (goat)
Pathway
chx04064
NF-kappa B signaling pathway
chx04514
Cell adhesion molecule (CAM) interaction
chx04518
Integrin signaling
chx04668
TNF signaling pathway
chx04670
Leukocyte transendothelial migration
chx04933
AGE-RAGE signaling pathway in diabetic complications
chx05143
African trypanosomiasis
chx05144
Malaria
chx05417
Lipid and atherosclerosis
chx05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
102174895
04668 TNF signaling pathway
102174895
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102174895
04518 Integrin signaling
102174895
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
102174895
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
102174895
05143 African trypanosomiasis
102174895
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
102174895
05418 Fluid shear stress and atherosclerosis
102174895
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
102174895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
chx04515
]
102174895
04090 CD molecules [BR:
chx04090
]
102174895
04091 Lectins [BR:
chx04091
]
102174895
Cell adhesion molecules [BR:
chx04515
]
Immunoglobulin superfamily
VCAM
102174895
CD molecules [BR:
chx04090
]
Proteins
102174895
Lectins [BR:
chx04091
]
I-type lectins (Siglecs)
102174895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
C2-set
ig
Ig_2
V-set
Ig_6
Ig_4
C2-set_2
Ig_5
ICAM_N
ICAM1_3_5_D2
C2-set_3
C1-set
Adhes-Ig_like
TrkA_C
RWD
Motif
Other DBs
NCBI-GeneID:
102174895
NCBI-ProteinID:
XP_005709616
UniProt:
A0A452FKF7
LinkDB
All DBs
Position
3:77943373..77964201
Genome browser
AA seq
735 aa
AA seq
DB search
MLRKMFVIFGVSDILWMVFAVSQAFKVDMFPNEYKIFAQIGDSVSLTCSATGCESPSFSW
RTQIDSPLNGKVKNEGTTSMLIMDPVSFGNEHQYLCTVTCKDMKREKAIRVEIYSFSKDP
EIRLSSPPEVGKPVTVTCSVPDVYPFERLEIELLKSNRSMKVQEFLEPSEKKAQETKSLE
VTFSPTDEDIGKALVCQATLHIYDDDSPPKERKTMKELEVYISPKDTAISVNPSTRLQEG
DSVTMTCTSAGLPAPRILWSKKLDNGNLQLLSENATLTLISMRAEDSGIYVCEGDNPVGK
DRKEVKLIVQEKNFTVEISPGPQIAAQIGHSVVLTCDVRDCESPSFSWRTQIDSPLNGKV
RREGSKSTLTLSPVSVENEHFYLCTVMCGQKKLEKGIQVKPYSFPSDPEIEMSGPLVSGN
PVTVSCKVPNVYPFDRLEIELFKGESIMMNKVFSKDVSKKALETKSLEKTFIPTAEDTGN
VLVCLARLPIDEMEFEPKQRQSTQTLYVNVAPRDTTISVSPSSILEEGSSVNMTCSSNGL
PAPKILWSRQLSNGDLQPISENETLTFMSTKMEDSGIYVCEGINQVGISRKEVKLIIQVA
PKDTQLTAFPSESVKEGDTVIISCTCGNVPPTLIILKKKAETGYTVLKSTGGAYTIHRAQ
LEDAGVYQCESKNEVGSQLRSLTLDVKGREGNKDYFSPELLVLYCAFFLIIPAIGMIIYF
ARKANMTGSYSLVEA
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcttaggaagatgtttgtgatctttggagtctcagatatactttggatggtgtttgca
gtttctcaagctttcaaagttgacatgttcccaaatgaatacaaaatttttgctcagatt
ggtgactctgtttcactgacttgtagtgcaacaggctgtgagtctccatcattttcttgg
agaactcagatagacagtccactgaatggaaaggtgaaaaatgaggggaccacatccatg
ctgatcatggatcctgttagtttcgggaatgaacaccagtacctgtgcacagtgacttgc
aaggatatgaaacgggagaaagcaatccgagtggagatctactctttctctaaggatcca
gagattcgtctgagcagccccccagaggtcgggaagccagtcacagtcacgtgttcggtg
cctgatgtttacccattcgaaaggctggagatagagttgttgaaaagcaaccgttccatg
aaagtacaggaatttctggagccttcagaaaaaaaggcccaagaaacaaagagcttggaa
gtgaccttctcgcctactgatgaggatattgggaaagctcttgtttgtcaagctacatta
cacatttatgatgatgattctccacccaaagaaaggaaaactatgaaagaactggaagtc
tacatctcacccaaagacacagctatatccgtgaatccctccacaaggctgcaggaaggc
gactctgtgacgatgacgtgtaccagtgcaggtctaccagctccacggattctctggagc
aagaaattagacaatgggaatctacagctcctttctgagaatgcaactctcactttaatt
tctatgagggcagaagattctgggatttatgtgtgtgaaggagataaccctgttgggaaa
gacagaaaagaggtgaaattaattgttcaagagaaaaactttactgttgagatctctcct
ggaccccagattgctgctcagattggccactcagtcgtgttgacctgtgatgtcagggac
tgcgagtccccatctttctcttggagaacccagattgacagccctctgaacgggaaggtg
aggagagagggctccaagtccacgttgaccctgagccctgtgagtgtcgagaacgaacat
ttctacctgtgcactgtgatgtgcgggcaaaagaaactggaaaagggaatccaggtgaag
ccctactccttccctagtgatccagaaattgaaatgagtggtccgttagtgagtggaaac
ccagtcactgtaagctgcaaggttcctaatgtgtatccttttgaccggctggagattgaa
ttgtttaaaggggagagtattatgatgaataaagtcttctcgaaagatgtaagtaagaaa
gccctagagaccaagagtttggagaagaccttcatccccaccgctgaagatactggaaat
gttcttgtttgtctggctcggttacctattgatgaaatggaatttgaacccaaacaaagg
cagagtacacagacactctatgttaatgttgctcccagggatacaaccatctcggtcagt
ccctcctccatcctggaggaaggtagttctgtgaatatgacatgctctagcaatggcctt
ccagctcccaaaatcttgtggagcaggcagctaagtaatggggatctacagcctatttct
gagaatgaaactctcaccttcatgtctacaaaaatggaagattctggtatttatgtctgt
gaaggcattaaccaggttggaataagcagaaaagaagtcaaattaattatccaagttgct
ccaaaagacacacaacttacagcttttccttctgagagtgtcaaggaaggagacactgtc
attatctcctgtacgtgtggaaatgttcccccaactttgataattctgaagaaaaaagca
gagactggctacacagtgctaaagtctacaggtggtgcctataccatccacagggctcag
ttagaggatgcgggagtataccagtgtgaatctaaaaatgaagttggctcacagctaagg
agcctaacacttgatgttaaaggaagagaaggtaacaaggactatttttctcctgaactt
ctggtactttattgcgcattcttcttaataatacctgccattggaatgattatttacttt
gctagaaaagccaacatgacagggtcatacagtcttgtagaagcatag
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