Capra hircus (goat): 102175035
Help
Entry
102175035 CDS
T02910
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
chx
Capra hircus (goat)
Pathway
chx03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102175035 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
chx01009
]
102175035 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
chx04515
]
102175035 (PCDH9)
Protein phosphatases and associated proteins [BR:
chx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102175035 (PCDH9)
Cell adhesion molecules [BR:
chx04515
]
Cadherins
Protocadherins
102175035 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Big_9
MAP17
V_ATPase_I
RCR
EphA2_TM
DUF6249
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
102175035
NCBI-ProteinID:
XP_005687637
LinkDB
All DBs
Position
12:46066326..47242354
Genome browser
AA seq
1203 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENIPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNKPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAK
VTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQSQRRVTFH
LPDGSQESCSDSGLGDHEPVGSGTLISHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSD
GPLGPRGLAEATEMCTQECLVLGHSDNCWMPPGLGPYQHPKSPLSTFASQKEWIKKDKLV
NGHTLTRAWKEDSNRNQFNDRKQYVSTEGHFNNGSHMTDIPLANLKSYKQAGGAIESPKE
HQL
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttaagactggattcc
gcaatagctcaagaacttatttacactattagagaggaattgcctgaaaatatacccata
ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacagggaccagcgcc
agccttgtctacagactggtttctaaagctggggatgcccctctggtgaaagtatccagt
agcactggggaaattttcacaacctccaatagaatagacagagaaaaactctgtgctgga
gcctcttatgctgaggagaatgagtgtttctttgaacttgaggtggtgatcctccccaat
gattttttcaggctgatcaaaataaaaataattgtcaaggataccaatgataatgccccc
atgtttccatctcctgtcatcaatatttccatcccagaaaacactttgatcaacagccgc
tttccaattccatcagcaacagatcctgacacaggcttcaatggtgtacagcattatgaa
ttgttaaatgggcagagtgtttttggactggatatcgtggaaactccggaaggagaaaag
tggccgcaattgattgttcagcaaaacttggacagagaacagaaagatacctatgtgatg
aaaatcaaagtagaggatggaggcaccccacaaaagtccagcaccgccatcctgcaggtc
acagtaagtgatgtaaatgacaacaagccagtgtttaaagagggtcaggtggaggtgcac
attccagagaatgctcccgtgggcacctctgtaattcagctccatgccactgatgcagat
ataggcagtaatgctgaaatccggtacatttttggtgcccaggtcgcgcctgcaaccaaa
agactctttgctttaaataatactactgggctgattacagttcagaggtccttagaccga
gaggagacggctattcacaaagtgacagtactggctagtgatggcagctctactcctgct
agagcaacggttaccatcaatgtcactgatgtaaatgataaccctccgaacatagacctc
aggtacattataagtcccatcaatggcaccgtgtatttgtctgagaaagatcctgtcaat
acaaaaattgccctaattacagtttcagataaggacacagatgtgaatggcaaagtgatc
tgttttattgaaagagaggtcccatttcatttgaaggcagtatatgacaaccaatatttg
ttagagacctcctctttgttggactatgagggcaccaaagaattcagctttaaaatcgtt
gcctctgattctgggaagcccagtttaaatcagactgctctggtaagggttaagcttgag
gatgaaaatgacaacccaccaattttcaaccagcctgtaattgagctgtcagtttctgaa
aacaaccgacgtgggttatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagatattgtttatcagcttggaccgaatgcctccttctttgatctggaccgaaag
acaggagttttgacagcctctagggtctttgacagagaagaacaagaaagattcattttt
acagtaactgccagggacaatgggacccctcccctccaaagtcaagcggctgtgatagtt
actgttctggatgagaatgacaatagccccaagtttactcataatcattttcaatttttt
gtgtctgagaatctgccaaagtatagtactgtgggggtaatcacagtgacagatgcagat
gctggagagaataaagctgtgactctttccattctaaatgacaatgataattttgtgttg
gatccctactctggagtcataaagtcaaatgtctcatttgacagagagcagcagagttcc
tacacttttgatgtcaaagccactgatgggggacaaccaccccgttcctctactgcaaaa
gtaactataaatgtcatggatgtcaatgacaatagtcctgttgtcatttcaccaccttct
aatacttcttttaagttggtgcctctctcagccattcctggctcagtggtagcagaagtt
tttgcagtggatattgacactgggatgaacgctgaacttaagtatacaattgtgagtggt
aacaacaaaggcttgtttcggattgatccagtaacaggtaacatcaccctggaagaaaaa
ccagcaccaactgatgtgggcttgcaccgattggtggtcaacataagtgacttgggatac
cctaagtctctacacacacttgtgcttgttttcctttatgttaatgacactgctggcaat
gcttcctatatctatgacttgattcgcaggactatggagaccccgttggacagaaacata
ggggatagcagccaaccctatcaaaacgaggactatctgaccatcatgatcgccatcgtc
gcaggtgccatggtggtcatcgtcgtgatctttgtcactgttctggtgcgctgtcgccat
gcatcaagattcaaagcagctcaaaggagcaagcaaggtgccgaatggatgtccccaaac
caggagaacaaacaaaacaagaaaaagaaaaggaagaaaagaaaatctcccaagagctct
cttttgaactttgttaccattgaagagtccaaacccgatgatgcagttcacgaacctatt
aatgggacaataagcctgccggctgagttggaggagcaaagcataggaagatttgactgg
ggcccggcacctccaaccaccttcaagccgaacagccctgacctggccaagcactacaaa
tccgcttctccacagcctgctttccatcttaaaccagacactccggtttcggtgaaaaag
catcacgtgattcaggagctcccgttggacaacacctttgtcgggggttgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagtcgcagcgccgggttacctttcac
ctccccgacggctcccaggaaagctgcagtgacagtggtctaggagaccacgagccggtg
ggtagtggaaccctgatctcacaccctcttcctctggttcagccacaggacgaattctat
gaccaggcctctccggacaagaggaccgaagcagacggcaactctgaccccaactctgat
gggcccttgggcccccgaggattagctgaagctacagagatgtgcactcaagagtgcttg
gttttgggtcactctgataattgctggatgcctcctggcttgggtccatatcaacaccct
aaatctcctctctcaacctttgcatcccaaaaagaatggatcaagaaggacaagcttgtg
aatgggcacaccctgaccagagcctggaaagaagatagcaacaggaaccagttcaatgac
cgtaagcagtatgtctccactgaaggccatttcaacaatggcagccacatgacagacatt
cctttggcaaatctgaagtcttataagcaagcaggaggtgctattgagagtcctaaggag
caccaactctaa
DBGET
integrated database retrieval system
