Capra hircus (goat): 102175335
Help
Entry
102175335 CDS
T02910
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
chx
Capra hircus (goat)
Pathway
chx05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
102175335 (DICER1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
chx03036
]
102175335 (DICER1)
Chromosome and associated proteins [BR:
chx03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102175335 (DICER1)
microRNA pathway
RISC loading complex
102175335 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
ResIII
DEAD
Cas3-like_C_2
DSRM_2
Motif
Other DBs
NCBI-GeneID:
102175335
NCBI-ProteinID:
XP_017921670
UniProt:
A0A452ESG3
LinkDB
All DBs
Position
21:complement(59299503..59368288)
Genome browser
AA seq
1922 aa
AA seq
DB search
MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLTKELSYQIRGDFNRSGRRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSNLEVTASWTKEKWNQEFTKHQVLVMTCYVALNVLKNGYLSLSDINLLVFDECHLA
ILDHPYREIMKLCENCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDL
VVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEEALNFINDCNISVHSKERDSTLISK
QILSDCRAVLVVLGPWCADKVAGMMVRELQKHIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDEE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGEAD
TEPVVDDDDVFPPYVLRPEDGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCRTRELPDG
TFYSTLYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMPVGKETVK
YEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRESYPKPGQPCYLYVIGMVLTTPL
PDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSLQ
MLELITRLHQYIFSHILRLEKPALEFKPADADSAYCVLPLNVVNDSSTLDIDFKFMEDIE
KSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFP
SPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRK
AKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGVG
VRSLPVDFRYPNLDFGWKKSIDSKSFISIANSSSAENENYCKHSTIVVPENAAHQGANRT
SSLENHDQMSVNCRTLFSESPGKLQVEVSTDLTAINGLSYNKSLANGSYDLANRDFCQGN
HLNYYKQEIPVQPTTSYPIQNLYNYENQPKPSDECTLLSNKYLDGNANTSTSDGSPVTAA
VPGTTEAGEAPPDRTASEQSPSPGHSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGD
SFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNW
LPPGYVVNQDKSNTEKWEKDEMTKDCMLANGKLDDDFEEEEEEEEDLMWRAPKEDADDED
DFLEYDQEHIKFIDNMLMGSGAFVKKISLSPFSATDSAYEWKMPKKSSLGSLPFSSDFED
FDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDAGKQSISYDLHTEQCIADKSIA
DCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIRRTDREKAMCPARENFTSQQKTLSGS
RAAASGAGYRASVLKDLEYGCLKIPPRCMFDHPDADRTLRHLISGFENFEKKINYRFKNK
AYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALV
NNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEE
DIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEM
EPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVP
NS
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcagcccctcagcatggcaggcctgcagctcatgacccctgct
tcctcaccaatgggtcctttctttggactgccatggcaacaagaagcaattcatgataac
atttatacgccaagaaaatatcaggttgaactgcttgaagcagctctggaccataatacc
atagtctgtttaaacactggctcagggaagacgtttattgcagtgctgctcactaaagag
ctgtcttaccagatcaggggagacttcaacagaagtggcaggaggacagtgttcttggtc
aactctgcaaaccaggttgctcaacaagtgtcagctgtcagaactcactcagatctcaag
gtcggggaatactcaaacctagaagtaactgcatcttggacaaaagagaaatggaaccaa
gagtttactaaacatcaggttctcgttatgacttgctatgtcgccttgaatgttttgaaa
aatggttacttatcactgtcagacattaaccttttggtgtttgatgagtgtcatcttgca
atcctagaccacccctaccgagaaattatgaagctttgtgaaaattgtccatcatgtcct
cgtattttgggactaactgcttccattttaaatgggaaatgtgatccagaggaattggaa
gaaaagattcagaaactggagaaaattcttaagagtaatgctgaaactgcaactgacttg
gtggtcttagacagatatacttctcagccatgtgagattgtggtagactgtggaccattt
actgacagaagtgggctttatgaaagactgctgatggagttagaagaagcacttaatttt
atcaatgactgtaacatatctgtacattcaaaagaaagagattctactttaatttctaaa
cagatactctcagactgccgtgcggtcctagttgtcctgggaccctggtgtgccgataaa
gtagctggaatgatggtcagagagctacagaaacacatcaaacatgagcaagaggagctg
caccggaagtttctgttgttcacagacactttcctaaggaaaatccacgccctgtgtgaa
gagcacttctcacctgcctcccttgacctgaagtttgtcactcctaaagtaataaagctg
ctcgagatcttacgcaagtacaagccgtacgagcggcagcagtttgaaagcgtggagtgg
tataataataggaaccaggataattatgtgtcctggagtgattctgaggatgacgaggaa
gacgaagagattgaagagaaagagaagccagagacaaattttccttctccatttaccaat
attttgtgtggaattatttttgtggaaagaagatacacagccgtggtcttaaacagattg
ataaaggaagctggcaaacaagatccagagctggcttacatcagcagcaattttataact
ggacatggcattggaaagaatcagcctcggaacaaacagatggaagcggaattcagaaaa
caggaagaggtccttaggaaatttcgagcgcatgaaaccaacctgcttattgcaacaagc
attgtggaagagggtgttgacataccgaaatgcaacttggtggttcgttttgatctgccc
acagagtatcgatcttatgttcagtctaagggaagagcgagggcacccatctctaattat
gtaatgttagcagatacagataaaataaagagttttgaagaagaccttaaaacatacaaa
gctattgaaaagatcttgcgaaacaaatgttccaagtcggttgataccggggaggccgac
acggagcccgtggtggacgatgacgatgtgttcccaccatacgtgctgaggcctgaggac
ggtcctcgcgtcaccatcaacacggccattgggcacgtcaacagatactgtgctagatta
ccaagtgatccgtttactcatctggctcctaaatgtagaacccgagagttgcctgatggt
acattttattcaactctttatctgccaattaactcacctcttcgagcctccattgttggt
cccccaatgagctgcattcgattggctgaaagagtcgtggctctcatttgctgtgaaaaa
ctgcacaaaattggtgaactggatgaccatttgatgcccgttgggaaggagactgttaaa
tatgaggaggagctggatctgcacgatgaagaagagactagtgttccaggaagaccgggc
tccacgaagcgaaggcagtgctacccgaaagcaatccccgaatgtttgagggagagctac
cccaagcccggtcagccctgttacctgtacgtgatcggcatggtcctgacgacgccttta
cctgatgagctcaacttcagaaggcggaagctctacccccccgaggacaccacaagatgc
tttggaatactgacagccaagcccatacctcagatcccacacttccctgtgtacacgcgc
tctggagaggtgaccatatctattgagttgaagaagtccggcttcacgttatctctgcaa
atgcttgagttgattacaagacttcaccagtatatattctcgcatattcttcggcttgaa
aaacctgccctagaatttaaacccgcagacgcggactcagcctactgtgttctacctctt
aatgttgttaatgactccagcactttggacattgactttaaattcatggaagatattgag
aaatctgaagctcgcataggcattcccagcacaaagtattcaaaagaaactccctttgtt
ttcaaattagaagattaccaagatgcagttatcattccaaggtaccgcaattttgatcag
cctcatcgattttatgttgctgacgtgtacactgatcttacccccctgagtaaatttcct
tcccctgagtatgaaacgtttgcggagtattataaaacaaagtataaccttgacctgacc
aatctcaaccagccgctgctggacgtggaccacacgtcttcacgacttaatcttttgaca
cctcgccatttgaatcagaaggggaaagctcttcctctaagcagtgctgagaagaggaaa
gccaagtgggaaagcctgcagaataaacagatactggttccagaactctgtgctatacat
ccaattccagcatcactgtggagaaaagccgtctgtctccccagcatactctaccgcctt
cactgccttctgactgcagaggagctcagagcccagacagccagcgatgctggtgtggga
gtcagatcacttcctgtggattttagataccctaacttagacttcgggtggaaaaaatct
atcgacagcaaatctttcatctcaattgctaactcctcttcagcggaaaatgagaattac
tgtaagcatagcacaattgtcgtccctgaaaatgctgcacatcaaggtgctaatagaacc
tcctctctagaaaatcatgaccaaatgtctgtgaactgcagaacgctgttcagcgagtca
cctggtaagctccaagttgaagtttcaacagatctgacagcaattaatggtctttcttac
aataaaagtcttgccaatggcagttacgatttagctaacagagacttttgccaaggaaac
catctgaattactacaagcaggaaatacctgtacaaccaactacctcatatcccattcag
aatttatacaattacgagaaccagcccaagcccagcgatgaatgtactctactgagtaat
aaataccttgatggaaatgctaacacatctacctcagatggaagtcccgtgacggccgcc
gtgcctggtactacagaggctggggaggcgcccccggacaggacggcttctgagcagagc
ccttctcctgggcactcctcgaggacgctcggccccaaccctgggctcattcttcaggct
ctgaccctttcgaacgccagcgacggatttaacctggagcggctcgagatgcttggcgac
tccttcctgaagcacgccatcaccacgtatctcttctgcacgtaccccgacgcgcacgag
ggccgcctttcctacatgagaagcaaaaaggtcagcaactgtaatctgtatcggcttgga
aaaaagaaggggctgcccagccgcatggtggtgtccatatttgacccccctgtgaattgg
cttcctcctggttacgttgtaaatcaagacaaaagtaacacagagaaatgggaaaaagat
gaaatgacaaaagactgcatgttggctaatggcaaactggacgatgactttgaggaggag
gaagaggaggaggaggacctgatgtggagggctcccaaggaggacgccgacgatgaggac
gacttcctggagtacgatcaggagcacatcaagttcatagataacatgctgatggggtca
ggggctttcgtcaagaaaatctcgctttctcctttttccgccaccgattctgcatacgag
tggaaaatgcccaaaaagtcctccctgggtagtctgccattctcatccgactttgaggat
ttcgactacagctcgtgggatgcgatgtgctatctggatccgagcaaagctgttgaagag
gatgactttgtggtggggttctggaacccatcagaagaaaactgcggcgtcgacgccggg
aagcagtccatctcctacgacctgcacactgagcagtgcatcgccgacaagagcatcgcc
gactgcgtggaggccctgctgggctgctacctgaccagctgcggcgagcgggctgcccag
ctgttcctctgctcgctgggtctgaaggtgctcccggtaattagaaggactgatcgggaa
aaggccatgtgcccggccagggagaacttcaccagccaacaaaagaccctttcagggagc
cgtgcggccgcctctggagccggctaccgagcctctgtgttgaaagacttggagtatggg
tgtttgaagatccccccgaggtgtatgtttgatcaccccgatgcagacaggacactgcgt
cacctgatctcgggttttgaaaatttcgaaaagaaaatcaactacagattcaagaataag
gcttaccttctacaggcttttacacacgcctcctaccactacaatacgatcacggattgt
taccagcgcttagaattcctgggagatgcaattttggactacctcataaccaagcacctt
tatgaagacccacggcagcactccccaggggtcctgactgacctgcgctctgctctggtc
aacaacaccatcttcgcgtcgttggctgtgaaatatgactaccacaagtactttaaggcc
gtttctcccgagctcttccacgtcatcgacgatttcgtgcagtttcagctcgagaagaac
gaaatgcaaggaatggattccgagcttaggagatccgaggaggatgaagagaaagaagag
gatattgaagttccaaaggccatgggggatattttcgagtcacttgcgggcgccatttac
atggacagcgggatgtcgctggagacggtctggcaggtgtactatcccatgatgcggccg
ctgatcgaaaaattttctgcaaatgtgccccgttcccctgtgcgagaattgcttgaaatg
gaaccagaaactgccaaattcagcccagctgagagaacctacgatggcaaggtcagagtc
accgtggaagtggtcgggaaggggaagttcaaaggcgttggccgaagttacaggattgcc
aagtctgcagcagcaagaagagccctgcgaagcctcaaagctaatcaacctcaggttccc
aacagctga
DBGET
integrated database retrieval system
