Capra hircus (goat): 102175418
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Entry
102175418 CDS
T02910
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
chx03041
]
102175418 (RBM39)
Spliceosome [BR:
chx03041
]
Common components
Common spliceosomal components
General mRNP proteins
102175418 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
102175418
NCBI-ProteinID:
XP_005688565
LinkDB
All DBs
Position
13:complement(64479232..64505576)
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AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttacaagaaggatgagaac
aagttgagcagtgctaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacgaaaaagaagcaaaagtaaggaacggaagcgaagtagagat
agagaaaggaaaaagagcaaaagccgtgaaaggaagcgaagtagaagcaaagaaaggaga
cggagccgatcaagaagtcgagatcgcagattcagaggccgctacagaagtccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgttctcgaagcaaaagtccattcaggaaagacaagagccctgtgagggaa
cctattgataatctcactcctgaggaaagagatgcaaggactgttttctgtatgcagctg
gcagcaagaattcggccaagggatttggaagagtttttctctacagttgggaaggttcgt
gatgtgaggatgatttctgacagaaattcaagacgttccaaaggaattgcttatgtggag
tttgttgatgttagctcagtgcctctagcaataggattaactggtcagcgggttttagga
gtgccgatcatagtacaagcatcacaggcagaaaaaaacagagctgcagcaatggcaaac
aatctacaaaagggaagtgctggacctatgaggctttatgtgggctcgttacactttaac
ataactgaagatatgcttcgagggatttttgagccatttggaaggattgaaagtatccag
ctcatgatggatagtgaaacaggtcgatccaagggatatggatttattacgttttctgat
tcagaatgtgccaagaaagctttggaacaacttaatggatttgagctagcgggaaggccc
atgaaagttggtcatgttactgaacgtactgatgcttccagtgctagctcatttttggac
agtgatgaactggaaaggactggaattgacttgggaacaactggtcgtctccagttaatg
gcaagacttgcagagggcacaggtttgcagatcccgccagcagcacagcaagctttgcaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acaagactttcccaacagactgaagcttcagcattagctgcagctgcctctgttcaacct
ctggcaacacaatgtttccaactctctaacatgtttaatcctcaaacagaagaagaagtt
ggatgggatacagagattaaagacgatgtgattgaagaatgtaataaacatggaggagtt
attcatatttatgttgacaaaaattcagctcagggcaatgtgtatgtgaagtgcccatca
attgctgcagccattgctgctgtcaatgcgttgcatggcaggtggtttgcgggtaaaatg
ataacagcagcatatgtacctcttccaacttatcacaacctcttccctgattctatgaca
gcaacacaactactggttccaagtagacgatga
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