Capra hircus (goat): 102175646
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Entry
102175646 CDS
T02910
Symbol
PKD2L1
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease 2-like 1 protein
KO
K04990
polycystin 2L1
Organism
chx
Capra hircus (goat)
Pathway
chx04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
102175646 (PKD2L1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
chx03037
]
102175646 (PKD2L1)
04040 Ion channels [BR:
chx04040
]
102175646 (PKD2L1)
Cilium and associated proteins [BR:
chx03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102175646 (PKD2L1)
Ion channels [BR:
chx04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102175646 (PKD2L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_6
SU10_portal
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
102175646
NCBI-ProteinID:
XP_005698450
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All DBs
Position
26:30438465..30482082
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AA seq
784 aa
AA seq
DB search
MNAVGSPEEQELQELGSGAWDNPTYSGTPSPQGTLQICTISSAVLPQPQPKQPEDGPQEK
AHRTLVSSCCLRICRGIRGLWGTTLTENTAENRELYVKTTLRELLIYVVFLVDICLLTYG
MTSSSAYYYTKVMSELFLHTPSDAGISFQAISSMEDFWDFAQGPLLDSLYWTKWYNNQSL
GHGSHSFIYYENLLLGVPRLRQLRVRNDSCVVHEDFREDILSCYDVYSPDKEEQLPFGRL
NGTAWTYHSQDELGGSSHWGQLTSYSGGGYYLDLPGSRRACAEALRGLQEGLWLDRGTRV
VFIDFSVYNANINLFCVLRLVVEFPATGGAIPSWQIRTVKLIRYVSNWDFFIFGCEIAFC
IFIFYYIVEEILELRIHGLRYLSSIWNILDLVVILLSIMAVGFHIFRTLEVNRLMGKLLQ
QPNMYADFEFLAFWQTQYNNMNAVNLFFAWIKIFKYISFNKTMTQLSSTLARCAKDILGF
AVMFFIVFFAYAQLGYLLFGTQVENFSTFAKCIFTQFRIILGDFDYNAIDNANRILGPVY
FVTYVFFVFFVLLNMFLAIINDTYSEVKEELAGQKDELQLSDLLRQGYKKTLRRLRLRKE
QVSDVQKVLQAGEQEIQFKDFTNTLRELEHTEHEMTKLTAAFTRFDQDGNGVLDEKEQNE
KRQKLEGERVAVHAEIENLGWSIVRSPPGESSPKQAAKAGGWVSGEEFYTLTRRVLQLET
VLEGVMTQVDAMGSKLTMVERKGWLAPLPGTGEQGIWEHLQAAPAVTPAPWGLXGRQESS
GEGS
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctgtgggaagccccgaggagcaggagcttcaagagctggggagcggagcctgg
gacaaccccacctacagcggcactccctcccctcaagggaccctccagatctgcaccatc
tccagtgcagtgctgcctcaaccccagcccaagcagcctgaagatggaccccaggagaag
gcacacaggaccctggtgtccagctgctgccttcgcatctgtcgtggcatcagaggactg
tggggaacgaccttgactgagaacacagctgagaaccgggagctgtatgtcaagaccacc
ctgcgggagcttttgatatacgtcgtgttcctggtggacatctgtctcttgacctatgga
atgacaagctccagtgcctattactacaccaaagtgatgtctgagctcttcttacacacc
ccatcggacgctggaatctccttccaggccatcagcagcatggaggacttctgggatttt
gcccagggcccgttactggacagcttgtattggaccaaatggtacaacaaccagagcctg
ggccacggctcccactccttcatctactatgagaacctgctgctgggggttccgaggctg
cggcagctgcgggtccgcaatgactcctgcgtggtgcatgaggacttccgcgaggacatt
ctgagctgctacgatgtctactccccagacaaggaagagcaactcccctttgggcgcctc
aatggcacagcatggacctaccactcgcaggatgagctggggggctcctctcactggggc
cagcttacaagctacagtggaggtggctactacctggaccttccaggatctcgacgggcc
tgtgcagaggcactcaggggccttcaggagggcctgtggctggacaggggcactcgggtg
gtcttcattgacttctcagtctacaatgccaacatcaatcttttctgtgttctgagactg
gtggtggagtttccagctacaggaggtgccatcccatcctggcaaatccgcacagttaag
ctgatccgctatgtcagcaactgggacttctttatctttggctgtgagattgccttctgc
atcttcatcttctactacatagtagaggagatcctagaactccgcatccatgggcttcgt
tacctcagcagcatctggaacattctggacctggtggtcatcttgctctccattatggct
gtgggcttccacatattccgaactctcgaggtgaatcggctgatggggaagcttctacag
cagccgaacatgtatgctgactttgagttcctcgccttctggcagacacagtacaacaac
atgaatgccgtcaacctcttctttgcctggatcaagatattcaagtacatcagcttcaac
aagaccatgacccagctctcctccacgctggcccgctgtgccaaggacatcctgggcttc
gccgtcatgttcttcatcgtgtttttcgcctatgcccagctgggctacctgcttttcggg
acccaagtggaaaactttagcactttcgccaagtgcatcttcactcagttccggatcatc
cttggggactttgactacaatgctattgacaacgccaaccgcatcctgggacctgtttac
tttgtcacctacgtcttcttcgtcttctttgtgctcctgaacatgttcctggccatcatc
aatgacacatactcagaggtaaaggaggagctggctggacaaaaggatgagctacagctt
tcagacctcctgagacagggttacaagaagaccctacggaggctgcgtctgaggaaggag
caggtttcagatgtgcagaaggtcctgcaggctggggagcaggagattcagttcaaggac
ttcaccaacaccttgagggagctggagcacacagagcatgagatgaccaagctcacggct
gccttcaccaggtttgaccaagatgggaatggcgtcctagatgagaaggagcagaacgag
aaacggcagaagctggagggggagagggtggccgtccatgctgagattgagaacttgggc
tggtccattgtgaggagcccaccaggcgagtcgagtccaaagcaggctgccaaagcaggt
ggctgggtttcgggagaagaattctacacgctcacaaggagagttttgcagctggagact
gtcctggaaggagtcatgacccaggttgatgccatgggctcaaagctgacgatggtggag
agaaaggggtggctggctcctcttccgggcacaggggaacaaggcatttgggagcacctg
caggcagccccagctgtgactccagccccctggggactctagggcaggcaggagagtagt
ggggaggggtcctaa
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