Capra hircus (goat): 102175711
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Entry
102175711 CDS
T02910
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1 isoform X1
KO
K24318
scavenger receptor class F member 1
Organism
chx
Capra hircus (goat)
Pathway
chx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102175711 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chx04131
]
102175711 (SCARF1)
Membrane trafficking [BR:
chx04131
]
Endocytosis
Phagocytosis
Scavenger receptors
102175711 (SCARF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_Teneurin
EGF_2
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
102175711
NCBI-ProteinID:
XP_017919883
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Position
19:complement(22536624..22548607)
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AA seq
869 aa
AA seq
DB search
MAARPSSLVSSGKAWGGSRKGVGRCGGQTDPSPPAALAAMGPGLLFPLLLLGALGAPGSE
LDAGGRHVCKASSPSAELQCCPGWRQKDQECTIPVCEGLDACREDEVCVKPGLCRCKPGF
FGAQCNSRCPGQYWGPDCREVCACHPHGQCEPATGVCHCQPDRWGDRCESPCACGPHGRC
NPETGACRCDPGWWSPTCRRPCQCNPAAARCDQATGSCLCEPGWWGRRCSFRCACHGSPC
AQESGRCACRPGWWGPECRQPCECVRGRCGAASGQCTCPPGFRGVRCELPCPAGRYGLQC
RDSCGQCKQNKPCSADTGSCEACEPGWNGTQCHQPCPPGTFGENCRQQCPHCRLGEACQP
DTGHCQHCEPGWRGPRCEDPCLIGTFGEACGSTCPTCIQGTCDTVTGECVCNAGYWGPSC
NTSCPSGFHGNNCSVPCECPEGSCDPVSGACQLGSHSQDAALIAGILVPLLLLLLAIACC
ACCCWAARLDPKDRPVRDGTAMSRMKLQVWEALTSSLGSALPCGSLSSHKLPWVTVSHHD
PEIPFNHSFIEPPSAGWASDDSFSSDSESGEEDEGPAYCVPPQEGMVSAAPAESSEASLA
GGPFPPPEDASTPFAIPRTSSLARAKRPSVSFAEGTKFAPQSRRGSGELSSPLRKPKRLS
RGTQPGPESQEIEEPTGPQVETDGAPPGTASPRDSAAGRRRLPLGGRTVAERVEAIEGSV
QESSGSVSTIYMLAGTPRGPEGPVRSVLRRFGSFQRGQAEPKVKSAIPKPPRRALSRNRG
SPRLDSGSAHQSPSSAMKEELTGALESAGTGSEEGARSLGGGIKSSGGGQEVAPEDGPLG
QDPQKVADEEGQEEPQYENVVPISGPPDP
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccgcccctctagcctggtttcctcaggaaaagcctggggaggaagcaggaag
ggggttgggcgctgtgggggccagactgacccaagccctcccgctgcactggccgccatg
gggccagggctgctgttccctctgctgctgctcggggctctgggggccccggggtctgag
ctggatgccggggggcggcacgtctgcaaggccagcagcccctctgctgagctccagtgc
tgcccaggctggaggcagaaagatcaagaatgcaccatccccgtctgcgaggggctggac
gcctgccgggaagacgaagtatgtgtgaaaccaggcctctgtcgatgcaaacctggattc
ttcggagcccagtgcaactcccgctgcccgggccagtactggggtcccgactgcagggag
gtctgtgcctgccacccgcacggccagtgcgaaccggccaccggcgtgtgccactgccaa
cccgaccgctggggcgaccgctgcgagtccccgtgcgcctgcggcccccacggccgctgc
aaccccgagaccggcgcgtgccgctgcgatcccggctggtggtcgcccacgtgccgccgc
ccgtgccagtgcaaccccgcggcggcgcggtgcgatcaggccaccggctcctgcctgtgc
gagccaggctggtggggccgccgctgcagcttccgctgcgcctgccacggctcgccgtgc
gcgcaggagtcgggccgctgcgcctgccggccgggctggtggggccccgagtgccggcag
ccgtgcgaatgcgtgcgcggccgctgcggcgccgcctccggccagtgcacctgcccgccc
ggcttccgtggcgtgcgctgcgagctgccctgccccgctggccggtacgggctccagtgc
cgcgacagctgtggccagtgcaagcagaataagccatgctctgcagacacaggcagctgc
gaggcctgcgagccaggctggaacgggacccagtgccaccagccctgccctcctggcacc
tttggggagaactgcaggcagcagtgcccccactgccggcttggagaggcctgtcagcca
gacactgggcactgtcagcactgtgagcctggctggcgggggcccagatgcgaagacccc
tgcctgattggcacctttggggaagcttgtggctctacctgccccacctgcatccagggg
acctgtgatactgtgactggggagtgtgtctgcaacgccggctactgggggcccagctgc
aatacttcgtgtccatctggcttccatggaaacaactgctctgttccctgcgaatgtcca
gagggaagctgcgaccctgtctctggggcctgccagctgggatctcatagtcaggatgcc
gccctcatcgcgggcatcctcgtacctctgctgctgctcctgctggccatcgcctgctgt
gcctgctgctgctgggctgcccggctggaccccaaggacaggccagtgagagatggaact
gccatgtccaggatgaagctgcaggtctgggaggccctgacctccagcctgggctctgcg
ctgccctgtggttccctgagcagccacaagcttccctgggtgacagtctcgcaccatgac
ccggagattcccttcaaccacagcttcatcgagccaccctctgccggctgggcttcggac
gactccttctcttcggattccgagtctggagaagaggatgagggtcctgcctactgcgta
ccaccccaagaagggatggtctctgcggccccagcggaatcctcagaggccagcctggct
ggaggtcccttccctccccctgaggacgcctccacaccgtttgccatcccgcgcacttcc
agcctcgccagggccaagcggccatcagtctcctttgctgaaggcaccaagtttgcaccg
cagagtcgccgaggctctggggagctctccagcccgctccgaaagcccaagaggctctcc
cgggggacccagccaggtcccgaaagccaggagattgaggagcccacaggcccacaagtg
gaaacagatggggcccctcctggcactgccagccccagggattcagctgctggccgccgc
cggctcccacttggtggccggacagtggctgagcgtgtagaagccatcgagggcagcgtc
caggaaagctcaggctctgtcagcacaatctacatgttggcagggacaccgcggggacct
gagggccctgtccggtctgtcctccgccgttttggtagcttccagagaggccaggcagaa
cccaaggtcaagagtgccatccccaagcctccacgtcgggccctgagtcggaacaggggc
agccccaggctggactctggctctgcccatcagagccctagctcagccatgaaggaggag
ctgactggggccttggagtctgcagggactgggtcagaggagggtgccaggagcctgggg
ggcggcatcaagagctcagggggtggccaggaggtggcccctgaggatggtcccctagga
caggatccccagaaggtggctgacgaggaagggcaggaggagccccagtatgaaaatgtt
gtacccatctctgggccaccggacccctga
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