Capra hircus (goat): 102175810
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Entry
102175810 CDS
T02910
Symbol
LSS
Name
(RefSeq) lanosterol synthase isoform X1
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
chx
Capra hircus (goat)
Pathway
chx00100
Steroid biosynthesis
chx01100
Metabolic pathways
Module
chx_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
102175810 (LSS)
Enzymes [BR:
chx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
102175810 (LSS)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Motif
Other DBs
NCBI-GeneID:
102175810
NCBI-ProteinID:
XP_017907853
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Position
1:complement(145851416..145883591)
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AA seq
733 aa
AA seq
DB search
MTEGTCLRRRGGPYKTEPATDLSRWRLSNKVGRQTWTYFQEEEDPGREQSGLEAHLLGLD
TKSFFKDLPKAHTARKGALNGVTFYAALQAEDGHWAGDYGGPLFLLPGLLITCHVAHIPL
PAGYQEEIIRYLRSVQLPDGGWGLHIEGKSTVFGTALNYVSLRILGVGPDDPDLVRARNL
LHKKGGAVFIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWMPAHPSTIWCHCRQVYLP
MAYCYSTRLSAEEGPLVQSLRQELYLEDYSCIDWAAHRNSVAPDDLYTPHSWLLHVVYAI
LNLYECHHSTSLRQRATQKLYEHIAADDRFTKCISIGPISKTINMLVRWHVDGPASAVFQ
EHVSRIPDYLWLGLDGMKMQGTNGSQIWDTAFAIQALLEAGAQHRPEFWSCLQKAHEYLR
ISQVPDNLPDYQKYYRQMSKGGFSFSTLDCGWIVADCTAEALKSILLLQEKCPFVTNHVP
QERLFDAVAVLLSMRNPDGGFATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQ
ALKTFHKQFPDHRAREIRETLERGLQFCRQKQRPDGSWEGSWGVCFTYGAWFGLEAFACM
GHTYHNGVACAEISRACDFLLSRQMADGGWGEDFESCEQRRYVQSAQSQIHNTCWALMGL
MAVRHPDVAALERGVSYLLEKQLPNGDWPQENISGVFNKSCAISYTSYRNVFPVWALGRF
SRLHPESALAGHP
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacggagggcacgtgtctgcgtcggagagggggaccctataagacagagcctgccaca
gacctcagtcgctggcggctcagcaataaggttgggaggcagacatggacctactttcaa
gaagaagaagatcctggccgagagcagtctggcctggaagctcacctcttgggactggat
acaaagagtttctttaaggacttgccaaaagcgcacacagcccgcaagggggctctgaat
ggggtgacattttacgctgcactgcaggctgaggatgggcattgggcgggtgattacggt
ggcccactcttcctcctgccaggcctcctgatcacgtgccatgtggcgcacatccctctg
ccggctggataccaagaagaaattatacggtacctgcggtctgtgcagctccccgacggc
ggctggggcctgcacattgagggcaagtccacagtatttggaactgcgcttaactatgtg
tctttgagaattctgggtgtggggcctgacgatcctgacctggtgcgagcccggaacctt
ctacacaagaaaggtggtgccgtgttcatcccctcctgggggaagttttggttggctgtc
ctgaacgtgtacagctgggaaggcctcaatacactgtttccagaaatgtggctgtttcct
gactggatgcccgcacatccctccacgatctggtgccactgtcggcaggtgtacctgccc
atggcctactgctacagcacccggctgagtgccgaggagggcccgctggtccagagtctc
cgccaggagctctacctggaggactacagctgcatcgactgggcggcgcacaggaacagc
gtggccccggacgatctgtacacgccgcacagctggctgctccacgtagtgtatgccatc
ctcaacttgtacgagtgccaccacagcaccagcctgcggcaacgggccacccagaagctg
tatgagcacatcgcggccgatgaccgcttcaccaagtgcatcagcattggcccgatctcg
aaaaccatcaacatgctcgtgcgctggcatgtagacgggccggcttctgctgtcttccag
gagcacgtgtccaggattcctgattacctctggctgggcctcgacggcatgaagatgcag
ggcaccaatggctcacagatctgggacaccgcgttcgccatccaggctttgctggaggca
ggtgcacaacacaggccggagttttggtcatgcctgcaaaaggcacatgagtatctccgg
atctcgcaggtgccagacaatctccccgactaccagaagtactaccgccagatgagcaag
ggtggtttcagcttcagcacactggactgtggctggatcgtggccgactgcacggctgag
gccttgaagtccatcctcctcctgcaggaaaagtgtccctttgttaccaatcatgttcca
caagagcggcttttcgacgctgtggctgtgttgctgagcatgagaaaccccgacggaggg
tttgccacctacgagaccaagcgtgggggacaccttctggagcttctgaacccctccgag
gtcttcggggacatcatgattgactacacgtatgtggagtgcacctcagcagtgatgcag
gcactgaagactttccacaagcagttcccagaccacagggccagggagatcagggagacc
ctcgagcggggcttgcagttctgtcggcagaaacagaggcctgatggctcctgggaaggc
tcctggggtgtgtgcttcacgtacggcgcctggtttgggctggaagccttcgcctgcatg
gggcacacctaccataatggggttgcctgtgcagagatctcccgggcctgtgatttcctg
ctgtcccgacagatggcagatggaggctggggggaagacttcgagtcctgcgagcagcgt
cgctatgtgcagagtgcccagtcccagatccacaacacatgctgggccctgatggggctg
atggctgtcaggcaccctgacgtggcggccctggagagaggagtcagctacctgcttgaa
aagcagctgccgaatggggactggccccaggagaacatcagtggcgtcttcaacaagtcc
tgcgccatcagctacactagctacagaaacgtcttccccgtctgggccctcgggcgcttc
tcccgtctgcaccctgagagcgccctcgctggccacccttga
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