Capra hircus (goat): 102175909
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Entry
102175909 CDS
T02910
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X3
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
chx
Capra hircus (goat)
Pathway
chx03013
Nucleocytoplasmic transport
chx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102175909 (SRRM1)
03015 mRNA surveillance pathway
102175909 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102175909 (SRRM1)
03041 Spliceosome [BR:
chx03041
]
102175909 (SRRM1)
Messenger RNA biogenesis [BR:
chx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102175909 (SRRM1)
Spliceosome [BR:
chx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
102175909 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
102175909
NCBI-ProteinID:
XP_013829718
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All DBs
Position
2:7653601..7682162
Genome browser
AA seq
913 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEASVQEATS
TSDILKVPKTEPVLEPKEPSPEKNSKKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRH
RSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSS
SSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNR
TRKSRVSVSPGRTSVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQ
YRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKEASPRM
QMGKRWQSPMTKSGRRRRSPSPPPARRRRSPSPAPPPRRRRSPTPPPRRRTPSPPPRRRS
PSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSPPVTK
RRSPSLSSKHRKGSSPSRSAREARSPQPNKRHSPSPRPRAPQTSSPPPVRRGASSSPQRR
QSPSPSSRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPV
QSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDPEGGGKKKKKKKDKKHKKDKKHKKHKKH
KKEKAVAAAAAAAVTPAAVAAPTTTSAQEEPEAEPEPKKETESEAEDNLDDLEKHLREKA
LRSMRKAQVSPQS
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcggttcagcaacaaa
cagaagaagctactgaagcagctgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gattcgaaaatgatgcaaatcaacctgaccgggtttttgaatgggaaaaatgctagagaa
tttatgggagaactgtggcccctactcttaagtgcacaagaaaacatcgctggaatccct
tctgctttcctagaactgaagaaggaagaaataaaacagagacagattgaacaagaaaag
ttggcatctatgaaaaagcaagatgaagacaaggataagagggataaagaagaaaaagaa
agcagcagagaaaaaagggagcgttctcgaagcccaagaagacgcaagtccagatctcct
tcccccagaagacgatcttcccctgtcaggagagagagaaagcgcagtcactctcggtct
ccccgtcacagaaccaaaagccggagcccttcccctgctccagagaagaaggaaaaaact
ccagagctcccagagccatcagtgaaagtaaaagaagcttcagtacaagaggccacttct
actagtgacatcctgaaagttcccaagactgaaccagtactagagcctaaagaaccttct
ccagagaaaaactccaaaaaggaaaaggagaagacccgaccaagatctcggtcacgttcc
aagtcaagatcccggacacgttctcgctctccttctcatactagaccaagaaggcgccat
agatctcgatcaagatcttactcacctagaaggcggccaagcccaagaagacggccatct
cctcgaagaaggaccccaccgagacgaatgcctcctccaccaaggcatagaaggagtaga
tctccagtgagacgaagaaggcgttcgtcggcatccttgtctgggagtagttcatcatct
tcttcgtctcgttcccggtcaccgccaaagaagcctccgaagaggacatccagccctcct
cgaaaaactcgtaggttatctccttcagcaagtcctccgaggcgaaggcataggccatca
cctccagctactccgccgccaaaaactcgtcattccccaacaccccagcagtcaaaccgt
acaaggaaaagtcgtgtttctgtctctccagggagaacttcagtgacaaaacataaaggt
actgagaaaagagaatccccttcaccagcaccgaagcctcggaaagtagagttatctgaa
tcggaagaagataaaggtggcaaaatggctgcagcagattctgtgcagcagaggcgccag
tatagacgacagaaccagcagtcttcgtctgattctggctcctcctcttcctcagaagat
gaacgacccaaaaggtcccatgtgaagaatggtgaggtaggcaggcgacggagacattcc
ccttcccggagtgcctctccatcacctcgaaagcgccagaaggaggcttcccctcggatg
cagatgggaaagcgatggcaatcgccaatgactaaaagcggtagacggaggagaagcccc
tccccaccacccgccagaaggcgacgttctccttctcctgctcctccgcctcgtcgacgc
aggtctcccacgccaccaccgcgacggaggactccgtctcctcctccacgtcgtcgctca
ccgtccccaagaagatactctcctccaatacagaggagatactctccttctccacctcca
aagagaagaacggcttcgccccctccccctcctaaacgaagggcatcaccatctccacca
ccaaagcgtcgggtctcccattcaccacctcccaaacaaagaagccccccagtcaccaag
agacgttcgccttcattgtcatcaaagcataggaaagggtcttccccaagccgatctgcc
cgggaggcccggtcaccgcagccaaacaaacggcattcgccctcaccacggcctcgcgct
cctcagacctcaagtcctccacctgttcgaagaggagcatcatcgtcaccccaaagaagg
cagtccccatctccaagttctaggcccattaggagagtctccaggactccggaacccaaa
aagataaaaaaagctgcctcaccaagccctcagtcagtaaggagggtctcatcttcccga
tctgtctcgggatctcctgagccagcagctaaaaagcccccagcacctccgtcacctgtc
cagtctcagtcaccctccaccaactggtcaccagcggtaccggttaaaaaggctaaaagc
ccaacaccaagcccatcaccggcaagaaattcagacccagaaggaggtggaaagaaaaag
aagaaaaagaaggacaagaaacacaaaaaggataagaagcacaagaagcacaaaaaacac
aagaaggagaaggctgtagctgccgctgctgcggctgctgtaacccctgcagctgtagct
gctcccacaaccacatcagcacaggaagaaccagaggcagagccagagcctaagaaggag
actgaaagtgaggctgaagataaccttgatgacttagaaaagcacctgcgtgaaaaggcc
ctgagatcaatgcggaaggctcaagtgtccccacagtcctag
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