Capra hircus (goat): 102176084
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Entry
102176084 CDS
T02910
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
chx03036
]
102176084 (TRERF1)
Chromosome and associated proteins [BR:
chx03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
102176084 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-met
zf-C2H2_2
Myb_DNA-bind_7
Zn_SUZ12
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
102176084
NCBI-ProteinID:
XP_017894577
LinkDB
All DBs
Position
23:32660713..32865504
Genome browser
AA seq
1201 aa
AA seq
DB search
MGDQQLYKTNHVAHGGENLFYQQPPLGVHGGLNHNYGNTVPGAGMDAPQASPISPHFPQD
TRDGLGLAVGSKNLGQVDTSRQGGWGGHAGPGNHIQLRGNLTNSNMMWGAPAQAEPTDGY
QYTYSQASEIRTQKLTSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTQSAVMDGAPDSA
LRQLLSQKPMEAPAPALPSRYQQASQQPHPGFTGGLSKPALQVGQHPSQGHMYYDYQQPL
AQMPVQGGQSLQAPQMLSQHMQQLQPHQYYPPQQQPHSGQQRVSMQEMQPPPQQQIRPPQ
PQPQPQPRQGSMQIPQYYQSPPMIQPLPEPQQPQMHLQPPSYHRDPHQYTPEQAHAVQLI
QLGSMPQYYYQEPQQPYGHPVYQQSHLPQHQQPEDSQPKTYPGDRQAQAMLSSHGDLGPP
DTGMGDTASSDLNRASSALPHRPLLSPGSIHLNNMGSQHQQLSPSAVWPQMHLPDGRAQP
GSPESSGQPKGVFGEQFDAKNKLTCSICLKEFKSLPALNGHMRSHGGMRASPSLKQEEGE
KAPAPPPQPQPPLPPPPPPPQLPPEAESLTPMVMPVSVPVKLLPPKPSSQGFANSVAAAP
SARDKPASSMSDDEMPVLEIPKKHQPGAAKAEEALRSAPAEKKKFRHRPEPLFIPPPPSY
TPNLAASHSGATLYQSQLRSPRVLGDHLLLDPAHELPPYTPPPMLSPVRQGSGLFSNVLI
AGHGPGAHPQLPLTPLTPTPRVLLCRSNSIDGSNLTVTPGPGEQTVDVEPRINIGLRFQA
EIPELQDVSALAQDTHRATLVWKPWPELENHDLQQRVENLLNLCCSSALPGGGTNSEFAL
HSLFEAKGDVMAALEMLLLRKPVRLKCHPLANYHYAGSDKWTSLERKLFNKALATYSKDF
IFVQKMVKSKTVAQCVEYYYTWKKIMRLGRKHRTRLSEIIDDCVTSEEDEEVEEEEDPEE
DRKSTREEESELPKSPEPPQGPVLAPAEGPPLQALGQPSGSFICEMPNCGADCRCHVTPF
LPQVFSSRQALNGHARIHGGTNQVTKARGAVPSGKQKPGSAQSGYCSVKSSPSHSTTSGE
TDPTTIFPCKECGKVFFKIKSRNAHMKTHRQQEEQQRQKAQKAAFAAEMAATIERTTGPV
GPQGLLPLDQLSLIKPIKDVDLLDDDVVQQLGGVMAEAEVVDTGLLLDDQASVLLQGDTE
L
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagcagctatacaagaccaatcatgtggcccacggtggtgagaaccttttc
taccaacagccaccacttggcgtccatggcgggctgaaccacaactatgggaatacagtg
cccggggctggaatggatgcccctcaggcatcacccatctccccccacttccctcaagac
actcgggatggtctaggcttggctgttggctccaaaaaccttggccaagtggatacctcg
aggcagggagggtggggaggccatgcagggcctggaaaccacatccagctacgtggcaac
ctgaccaactcgaacatgatgtggggggcaccagcccaggcggagcccactgatggctac
cagtacacctactcgcaggccagcgagatccggacccagaagctcaccagcggtgtcctg
cacaagctagactctttcacccaggtgtttgccaaccaaaacctgcgaattcaggtcaac
aatatggcccaggtgctgcacacccagtcagcggtgatggacggagcgcccgacagcgcc
ctccgccagttgctgtcccagaagcccatggaggccccagcaccggctctcccgtcccgc
taccagcaggcatcccagcagcctcaccctggttttactggtgggctatccaaaccggct
ctccaggttgggcagcacccgagccaagggcacatgtattatgactaccagcaaccgctg
gcccaaatgccggtgcagggaggacagtcgctgcaggccccccagatgctatcccagcac
atgcagcagctgcagccgcatcagtattacccgccgcagcaacagccacactccgggcag
cagcgggtgtccatgcaagaaatgcagccgccgccgcaacagcagattcgcccgccacag
ccccagccgcagccgcagccacggcagggttcaatgcagatacctcagtattaccagtcc
ccacccatgatacagcctttgccagagccgcagcagccccagatgcacctgcagccccct
tcttatcacagggacccccaccaatacaccccggagcaggcgcacgcagtccagctgatt
cagctgggctccatgccccagtactactaccaggagccccagcagccctacggccacccc
gtgtaccagcagagccacctgcctcagcaccagcagcctgaggacagtcagcccaagact
tatccaggcgacaggcaggcccaggccatgctgagctcccacggggacctggggcctcca
gatacaggaatgggagacacggccagctccgacctgaaccgggccagcagtgccctcccg
caccggccgctcctgtcccctggcagcatccacctcaacaacatggggtctcagcaccag
cagctgtctcccagtgccgtgtggccccagatgcacctacctgatggccgagcccagcca
gggtctcctgagtcaagcggccaacccaaaggagtgtttggggagcagtttgatgccaag
aacaagctgacatgctccatctgcctgaaggagttcaagagcctgcccgccctgaatggc
cacatgcggtcccatggggggatgagggcctcccccagcctcaaacaggaggaaggagag
aaggccccggctcctccgcctcagccccagccgccactgccgcctccgccgccgccacct
cagctccctcccgaggcggaaagcctcacgcctatggtcatgcccgtgtctgtccctgtc
aagcttctcccgcccaagcccagctctcagggcttcgccaacagcgtcgctgccgccccc
tcggccagagacaagccagccagctcgatgtcggacgacgagatgcccgtgctcgaaatt
cccaagaagcaccagccaggcgcggccaaagccgaggaagccctcagaagcgcgccggcg
gagaagaagaagttccggcaccggcccgagccgctcttcatcccgccaccgccctcctac
acgcccaacctcgccgcctcgcactcgggcgccaccctctaccagagccagctgcgctcc
ccgcgggtgctgggcgaccacctgctcctggaccccgcccacgagctgcccccctacacg
cccccgcccatgctcagcccggtgcgccagggctcggggctcttcagcaacgtgctcatc
gccggccacggccccggcgcccacccgcagctgcccctcacgcccctgacgcccacgccg
cgcgtgctgctctgccgctccaacagcatcgatggcagcaacctgacggtcaccccgggg
cctggagagcagaccgttgatgtcgaaccacgcatcaacattggcttgcgattccaagcg
gagatcccagaactccaggatgtctctgccctggcccaggacacacacagggccacacta
gtatggaagccctggccagagctggaaaaccatgatctccagcaaagagtggagaatctc
ctgaatttatgctgttcaagtgcgttgccaggtggagggaccaattctgaatttgctttg
cactctctcttcgaggccaaaggtgatgtgatggctgctctggaaatgctgctgttgcgg
aaaccagtcaggttaaaatgtcatcctttagcaaattaccactatgccggttcggacaag
tggacctccctagaaagaaaactgtttaataaagcactagccacttacagcaaagacttt
atttttgtacagaagatggtgaagtccaagacggtggctcagtgtgtggagtactattac
acgtggaaaaaaatcatgaggttggggaggaaacaccggacacggctctcggaaatcatc
gacgactgtgtgacgagtgaagaagatgaagaggtagaggaggaggaggatccggaagaa
gacaggaaatccacaagagaagaggagagtgaattgcccaagtccccggagccgccgcag
ggcccggtcctggctcccgcagaggggccgcccctgcaggccctgggccagccctcgggc
tccttcatctgtgaaatgcccaactgcggggcggactgtagatgtcatgtcactcccttt
cttccccaggtgttcagctcccggcaggcactgaacggccacgcccgcatccacggtggc
accaaccaggtgaccaaagctcggggcgctgttccctctgggaagcagaagcctggcagt
gcccagagcgggtactgctcggtgaagagctcaccctcccacagcaccaccagtggcgaa
acagaccccaccaccatcttcccctgcaaagagtgcggcaaagtcttcttcaagatcaaa
agccgaaatgcacacatgaaaactcacagacagcaggaggaacagcagaggcagaaagcg
caaaaggcggcatttgcagccgaaatggcagccacaatcgagaggactacggggccggtg
gggccgcaggggctgttgcccctggaccagctgagtctgatcaaacccatcaaggacgtg
gacctcctcgacgacgacgtcgtccagcagttaggaggcgtcatggcagaggccgaggtc
gtggacaccggtctcctcctggatgatcaggcctcagttttgcttcagggtgacacagaa
ctctaa
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