Capra hircus (goat): 102176171
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Entry
102176171 CDS
T02910
Symbol
ATG2B
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
chx
Capra hircus (goat)
Pathway
chx04136
Autophagy - other
chx04140
Autophagy - animal
chx05010
Alzheimer disease
chx05014
Amyotrophic lateral sclerosis
chx05016
Huntington disease
chx05017
Spinocerebellar ataxia
chx05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102176171 (ATG2B)
04136 Autophagy - other
102176171 (ATG2B)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
102176171 (ATG2B)
05014 Amyotrophic lateral sclerosis
102176171 (ATG2B)
05016 Huntington disease
102176171 (ATG2B)
05017 Spinocerebellar ataxia
102176171 (ATG2B)
05022 Pathways of neurodegeneration - multiple diseases
102176171 (ATG2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chx04131
]
102176171 (ATG2B)
03029 Mitochondrial biogenesis [BR:
chx03029
]
102176171 (ATG2B)
Membrane trafficking [BR:
chx04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
102176171 (ATG2B)
Mitochondrial biogenesis [BR:
chx03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102176171 (ATG2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
DUF7054
Motif
Other DBs
NCBI-GeneID:
102176171
NCBI-ProteinID:
XP_005695424
LinkDB
All DBs
Position
21:complement(60499227..60575992)
Genome browser
AA seq
2078 aa
AA seq
DB search
MPWPFSESIKKRACRYLLQRYLGHFLQEKLSLEQLSLDLYQGTGSLAQVPLDKWCLNEIL
ESADAPLEVTEGFIQSISLSVPWGSLLQDNCALEVRGLEMVFRPRPRLASGSEPMYWSSF
MTSSMQLAKECLSQKLTDEQGEGSQPFEGLEKFAETIETVLRRVKVTFIDTVLRIEHVPE
NSKTGTALEIRIERTMYCDETADESSGINVHQPTAFAHKLLQLSGVSLFWDEFSASAKSS
PVCSTAPVETEPKLSPSWNPKIVYEPHPQLTRNLPEVAPSDPVQIGGLNGRLELSLTLKQ
NEVLPGAKLDIDGQIDSIHLFLSPRQVHLLLDMLAAIAGPENSSKIGLANKDRKNRPMQQ
EDEYRIQMELNRYYLRKDSLSAGVSSEQSFYETETARTPSSREEEVFFSMADMDMSHSLS
SLPPLGEPPNMDLELSLTSTYTNTPAGSPLSTTVLQPTWGDFLDHHKEQPVRGSALPSNL
VHPASLQKTALPSRSVSVDESRPELIFRVAVGTFSVSVLHIDPLSPPESSLNVNPLTPMA
IAFFTCIEKIDPAQFSTEDFKSFRAVFAEACSHDHLRFIGTGIKVSYEQRQRSASRYFST
DMSIGQMELLECLFPTDSHSVPPHYTELLMFHSKERTDSHLPVCLQLHYKHSENKGPQGS
QARLSSVPQKAELQVKLNPVFCELDISIVDRLNSLLQPQKLTTVEMMASHMYTSYNKHIS
LHKAFTEVFLDDSHNPANCRVSVQVATPALNLSVRFPIPDLRSDQERGPWFKKSLQKEIL
HLAFTDLEFKTEFLGGSTPEQVKLELTFRELVGSFQEDKGEPSIKFFHVASGGDGDTTSS
DDFDWPRIVLKVNPPAMHSILERIAAEEEEESDGHYQEEEEGGAHSLKDVCDLRRPAPSP
FSSRRVMFENEQMVMPGDPVEMTEFQNKAISNSHYVLELTLPNIHITLPNKSFYEKLYNR
IFNDLLLWEPTAPSPVETFENISYGIGLSVASQLINTFSKDSFSPFKSTVHYDEESGSEE
ETLQYFSTVDPNYRSRRKKKLDSQNKNSQSFLSVLLSINHGLIAVFTDVKQDDGDLLENK
HGEFWFEFSSGSLFCVTKYEGFDDKHYVCLHCSSFSLYHKGIVDGAVPSTETRLPSSTRP
HWLEPTIYSSEEDGLSRASSDGVGGDTLNMLSVAVKIVSDKSESNTKEFLIAVGLKGATL
QHRMLPSGLSWHEQILYFLNIADEPVLGYNPPTSFTTFHVHLWSCALDYRPLYLPIRSLL
TVETFSVSSSVALDKSSSTLRIILDEAALHLSDKCNTVTINLNRDYVRVMDMGLLELTIT
AVKSDSDGEQTEPHFELHCSSDVVHVRTCSDSCAALMNLIQYVASYGDLHATNKADVKPG
APQRKVKVDSVGRSSSRGPVLPEADQQILRDLMSDAMEEIDMQEAASSVKPQSNGVSDEK
SQVQEPCCSDLFLFPDESGNVSQEPGPTYASFTHHLISDAVTGVPTENDDFCILFAPRAT
VQEKEEEPVVKIMVDDAIVIKENYFSLPVTKTDTSKAPLHFPVPVVRYLVKEVSLVWHLY
GGKDFGTAPPTSPAKSYISPHSSPSHTPTRHGHNMVCGGKGRNHDFLMEIQLSKVKFQHE
VYPPCKPECESSLVEHPVSRQVFIVQDLEIRDRLATSQMNKFLYLYCSKEMPRKAHSNML
TIKALHVRPESGRSPQECCLRVSLMPLRLNIDQDALFFLKDFFTSLSAEVELLMTPDPEV
KKSPGADVTCSLPRHLSTSKEPNLVLSFPGPKQPSPNGSASSVQVLNGEEEKDFSPEEAL
FSDQPVFFREFRFTSEVPIRLDYHGKHVSMDQGTLAGILIGLAQLNCSELKLKRLFYRHG
LLGVDKLFSYAITEWLTDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGR
IVRGFQRGAASFGTSTAMAALELTNRMVQTIQAAAETAYDMVSPGTLSIEPKKVRRFPHH
RLAHQPVDLREGVAKAYSVVKEGIADTAQTIYETAAREHESRGVTGAVGEVLRQLPPAVV
KPLIVATEATSNVLGGMRNQIRPDVRQDESQKWRHGDD
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atgccttggccgttttcggagtccatcaagaagagggcctgtcggtacctcctgcagagg
tacctgggccacttcctgcaggagaagctgagcctggagcagctcagcctggacctgtac
cagggcaccgggtccctcgctcaggtccccttggacaaatggtgtctcaatgagatcctg
gagtcagcagatgcacctttagaagtcacagaaggattcatacagtcaatttctctgtcc
gttccatggggctccttgttgcaggacaattgtgcactggaagtgagagggttagaaatg
gtcttccgacctcgaccccgcctagcgtctggttctgagcccatgtactggtcaagcttc
atgaccagcagtatgcaactggcaaaagaatgtcttagccagaaactaacagatgaacaa
ggagaaggatctcagccttttgaaggacttgaaaaatttgctgaaaccatcgaaacagta
ctaagaagagtaaaagtcacttttatagatactgtcttgagaattgaacacgtgccagaa
aattccaaaactggaactgcacttgaaattcgaatagaaagaaccatgtactgtgatgaa
actgctgacgagtcctcaggaattaacgtacatcaacccacagcttttgctcacaagtta
cttcagctctctggagtgtctctcttctgggatgagttttctgcatctgcaaaatcctcc
ccagtgtgttcaactgcgccagtggaaacagagccaaagctgtcacctagctggaatcca
aaaattgtttatgagcctcacccacaactaacaaggaatttgccagaagtagcaccttct
gacccagtgcagataggagggctcaatggtaggctggagttgagtctcacattgaaacag
aatgaagtacttcctggagctaagttggatattgatggacagatagactcgatacatcta
ttcctgtcacccaggcaggtacacttgcttttggacatgttagcagctattgctggacca
gaaaattcaagcaaaattggattagctaataaagatagaaaaaatcgacctatgcagcaa
gaagatgaatatcgaattcaaatggaattgaaccgatattatttgaggaaagattccctc
tctgccggcgtgtcctcagagcaaagcttttatgagacagaaacggctcgtacaccttct
agccgggaagaagaagttttcttctccatggctgatatggacatgtcgcacagtctctct
tctcttccaccccttggggaacccccaaatatggaccttgagttatcattaactagtaca
tatacaaacaccccagcaggatctccattaagtactactgtgcttcagccaacatgggga
gacttccttgatcatcataaagaacagccagtaagaggatcagcgttaccctccaaccta
gttcacccagcatctttacaaaagactgctcttccctctaggtctgtttcagtggatgaa
tccaggcctgaacttatttttagagtagctgtgggaacgttttcagtctctgtgcttcac
attgatcctttatctccacctgaatcatcattgaatgttaatccattgacaccaatggcg
atagctttctttacttgtatagaaaaaattgatccagcacaattttcaacagaagatttt
aagtcttttcgagcagtatttgcagaagcttgctcacatgatcaccttagatttataggc
accggcatcaaagtgtcctatgaacaaagacaaagatcagcgtcccgatatttcagtact
gatatgtccattgggcaaatggaacttctggaatgcttgtttccgactgattctcattct
gttcctcctcactatacagagcttttgatgttccattccaaagaacgaactgattctcac
ctccctgtgtgtcttcagcttcattataagcattctgagaataaaggacctcagggtagt
caagcaagacttagttccgttcctcagaaggcagaattacaggttaagttaaatccagtg
ttttgtgagctggatatcagtattgtggacaggttaaattccttgcttcaaccgcagaaa
ctcactacagtggagatgatggcatcacatatgtatacatcatataataagcatattagt
ttgcacaaagctttcactgaagtatttctagatgactcacataatcctgcaaactgccgg
gtatcagtacaagttgccacaccagcattaaacctttctgttcgcttcccaatacctgat
cttcggtcagatcaagagagaggaccatggtttaagaagtcacttcagaaggagattctt
catttagcattcacagatctagagtttaaaactgaattcctaggaggatcaacccctgaa
caagttaaattggagcttacatttagagaactagttgggtcattccaggaagataaagga
gaaccatctattaagtttttccatgtggctagtggaggagatggagatacaacgtcatca
gatgactttgactggccgcgaattgtactgaaagtgaacccaccagccatgcattccatt
ttggagagaatagcagctgaggaggaagaggaaagtgacggccactatcaggaggaagag
gagggaggagctcattccctgaaggatgtctgtgatctgagaaggccagccccatctccc
ttctcttcccgtagagtaatgtttgaaaatgaacagatggtgatgccaggagaccctgta
gaaatgacagagtttcagaataaagcaatcagcaattctcactatgtgctggaacttaca
ttacccaatattcatataacactgcctaataaaagcttttatgagaagctttataatagg
atctttaatgatttgctgctatgggaaccaacagctccttcaccagtagagacatttgaa
aatatttcgtatggtattgggctttcagtagccagtcagctgataaataccttcagcaag
gatagttttagtccatttaaatctacagttcactatgatgaggaaagtggatctgaggag
gagactttgcagtatttttctactgttgatcccaattatcgttctcgtaggaaaaaaaaa
ctagactcccagaacaagaactcacagagttttctctcagttcttctgagtattaatcat
gggttaattgcagtgtttacagatgtaaagcaagatgatggagatctgttggaaaacaag
catggtgaattctggttcgagttcagcagcggctcgttgttttgtgtgaccaagtatgaa
ggcttcgacgacaagcactacgtgtgccttcactgcagcagcttcagtctctaccacaaa
ggcatagtggatggagcagttccttctacagaaacacgactgcctagttcaacccgccca
cattggttagaacctactatttattcctctgaagaagatggcctcagtcgagcttcttca
gatggtgttggaggagacactttgaatatgctgtctgttgcagttaaaatagtgtctgat
aaatcagagtccaatacaaaggagtttctcattgctgtagggctaaaaggagctactctc
cagcacagaatgcttccttctgggcttagctggcatgagcagattttatacttcttgaat
attgctgatgaacctgttctgggatacaatcctccaacttcatttaccacctttcatgtt
catctctggagctgtgcacttgattataggcctctttatttgccaatccgatcccttctt
actgttgaaacattcagcgtttcaagtagtgtcgccttggataaatcatcttcaactctc
agaataattttggatgaagctgctttacacctgtctgacaagtgtaatactgttactata
aatttgaatagagattatgttcgtgtgatggatatgggacttttggaattaaccataact
gcagtaaagtctgattccgatggagagcaaactgaaccgcactttgaattgcactgttcg
agtgacgttgtccatgttagaacgtgctcagactcttgtgctgctctaatgaatctaatt
caatacgttgcaagctatggggacttacatgccaccaacaaggcagacgtgaagccagga
gctcctcaaagaaaggtgaaggtagattctgttggtcggtcatcctcacgtggtccagta
cttcctgaagcagatcaacagatattacgagatttgatgagtgatgctatggaggagatt
gacatgcaagaagcagcttcatctgtaaaaccacagtctaatggtgtttctgatgaaaaa
tctcaagttcaggaaccatgttgttcagacctcttcctgtttcctgatgagagtggaaac
gtgtcccaggagcctggccccacttacgcctcattcacccaccacttgattagtgatgca
gtgacaggcgtgcccacggaaaatgacgacttttgcattctttttgcaccaagagcaacc
gttcaggagaaggaagaagaaccagttgtaaaaataatggttgatgatgcaattgtgata
aaagagaattattttagtctgcctgttacaaagacagacactagcaaagccccattgcac
ttccctgttcctgtcgttcggtacctggttaaagaagtctctctcgtttggcatctttat
ggaggaaaagattttggaacagcccctcctacttctccagctaaaagttacattagtccc
catagctcaccttctcacacacctacaagacatggacataatatggtatgtgggggaaaa
ggaagaaaccatgactttttaatggaaatacagttaagcaaggtgaagtttcagcatgag
gtctacccgccctgcaaaccagaatgcgagtctagccttgtggagcacccggtgtcccgg
caggtgttcatcgtgcaggatcttgaaattcgagatcgtctggcaacatcacaaatgaat
aaatttttgtacctgtattgcagtaaagaaatgcctcggaaagctcattccaacatgttg
acaattaaagcattacacgtgcgtccagagtctggcaggtccccacaggagtgctgccta
agagtatcactaatgccacttcgcctaaatattgaccaggatgccttgttcttcttgaag
gatttctttacaagtctttctgcagaagtagagctgctcatgactccagatccagaagtt
aaaaagtctcctggggctgatgtcacctgcagtttgccaaggcatttaagcacctcaaaa
gagccaaatctagttctttctttccctgggccaaagcagccttctccgaatggcagtgcc
agttcagtgcaagtgcttaatggggaagaagagaaggacttctctccggaagaagcgttg
tttagtgatcagcccgtgttttttagagaatttagattcacatcagaagttcctattcga
cttgattatcatgggaaacatgtatcaatggatcagggtacattagctgggattttgatt
ggtctcgcccagttaaactgctctgaactaaagctgaagaggcttttctatcggcatggt
ttgctaggtgtggacaaattattctcatatgcaatcaccgaatggcttactgacattaag
aagaaccagcttccaggaatcctgggaggtgttgggcctatgcattcactagtacaacta
gtgcaaggcctcaaggacttggtctggttaccaattgagcagtaccgaaaggacggtcgc
attgtcagagggtttcagagaggggctgcctcctttggcacctcgacggcgatggctgct
cttgagctcacaaacagaatggttcaaaccatacaggcagcggcagagactgcgtatgac
atggtgtctccaggcaccctttctatcgagcccaagaaggtcagaaggttcccccatcac
cggttagcccaccagccagtggacctgagggaaggggtggccaaggcctacagtgtcgtg
aaggagggaatcgcagacacggctcagaccatttatgaaactgccgctcgggaacacgag
agccggggggtgacgggcgccgtcggggaagtcctgcgccagctccccccggccgtggtg
aaacctctgatcgttgccacagaagcgacatcgaacgtcctgggtggcatgagaaaccag
atcagaccagatgttcggcaggacgagtcgcagaagtggcgccatggggatgactga
DBGET
integrated database retrieval system
