Capra hircus (goat): 102176266
Help
Entry
102176266 CDS
T02910
Symbol
SYNJ1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
chx
Capra hircus (goat)
Pathway
chx00562
Inositol phosphate metabolism
chx01100
Metabolic pathways
chx04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
102176266 (SYNJ1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
102176266 (SYNJ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chx04131
]
102176266 (SYNJ1)
Enzymes [BR:
chx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
102176266 (SYNJ1)
Membrane trafficking [BR:
chx04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
102176266 (SYNJ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
RRM_1
Motif
Other DBs
NCBI-GeneID:
102176266
NCBI-ProteinID:
XP_017902584
LinkDB
All DBs
Position
1:1282061..1376560
Genome browser
AA seq
1606 aa
AA seq
DB search
MRKRWTRQSGSDGCGGGDRGRRRSRRKRAASEERRMAFSKGFRIYHKLDPPPFSLIVETR
HKEECLMFESGAVAVLSSAEKEAIKGTYSKVLDAYGLLGVLRLNLGDIMLHYLVLVTGCM
SVGKIQESEVFRVTSTEFISLRVDSSDEDRISEVRKVLNSGNFYFAWSASGVSLDLSLNA
HRSLQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAKACLIS
RLSCERAGTRFNVRGTNDDGHVANFVETEQVVYLDDTVSSFIQIRGSVPLFWEQPGLQVG
SHRVRMSRGFEANAPAFDRHFRTLKNLYGKQIIVNLLGSKEGEHMLSKAFQSHLKASEHA
ADIQMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLDYGIFHFDGSEVQRCQSGTVRTNCLD
CLDRTNSVQAFLGLEMLTKQLEALGLAEKPQLVTRFQEVFRSMWSVNGDSISKIYAGTGA
LEGKAKLKDGARSVSRTIQNNFFDSSKQEAIDVLLLGNTLNSDLADKARALLTTGSLRVS
EQTLQSASSKVLKSMCENFYKYSKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDA
PKLAGIQEFQDKRSKPMDIFAIGFEEMVELNAGNIVNASTTNQKLWAVELQKTISRDNKY
VLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCF
VCSHFAAGQSQVKERNDDFVEIARKLSFPMGRLLFSHDYVFWCGDFNYRIDLPNEEVKEL
IRQQNWDSLIAGDQLINQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWT
DRVLWRRRKWPFDRSAEDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVAL
IDIDIFEVEAEERQNIYKEVIAVQGPPDGTVLVSIKSSLPENNFFNDALIDELLQQFTNF
GEVILIRFVEDKMWVTFLEGSSALSVLNLNGKELLGRTITITLKSPDWIKTLEEEMSLEK
INIPLPSSTSSTLLGEDAEVTADFDMEGDVDDYSAEVEEILPQHLQPSSSSGLGTSPGSS
PRTSPCQSPTISEGPVPSLPVRPSRAPSRTPGPPASQSSPVDTLPATQLQQKDSSQTLEP
KRPPPPRPVAPPARPAPPQRPPPPSGARSPAPARKEFGGVGAPPSPGVARREMEAPKSPG
TTRRDNLGRSQLPPQAGLPGPGLAGHSAARPIIPPRAGVISAPQSHARASAGRLTPESQS
KPSEVLKGSALLPEPLKPQAALPAPPPLAPPVQKMQEPLIPVAAPLPQAAPQPSLETPPQ
PPPRSRSSHSLPSESPAQPQVKTNGVSAVRLDSPLKSDPFEDLSLNLLAVSKAQPSVHTP
NPRGLTPLPSATPSNTNTLSSVSCMPTMPPIPARSKSQENTRCSPNPFIPSSSSTNPFTN
RTATPGNPFRAESQESEATSWFSKEEPVAPSPFSSLRALGQNSNKPSSSLDGFNDSFDPQ
GPPALTVSNPKGWVTFEEEEDFGVTGKSGSARPDVFLGKQPSSSPGSKVTLGDDWGRSTN
VSLCVLPARRPPPPPVPLLPPGTTPPTDPFTALASKASPTLDLTER
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagagatggacgcgccagagcggaagtgacggttgcggcggcggcgaccgcgga
aggaggaggagccggagaaagagggctgcctccgaagaaaggagaatggcgttcagcaaa
ggatttcgaatctatcacaaattggatcccccacctttcagcctcatagtggaaaccagg
cataaggaagaatgtctcatgttcgagtctggagctgtagcggtgctctcatcagcagaa
aaagaggcaatcaagggtacatactccaaagttctagatgcctatggacttttaggtgtt
ttacgattaaatcttggtgatattatgttacattatctggtcctagtcactggatgtatg
tccgttggaaaaattcaagaatctgaagttttccgagttacttccactgaatttatatca
ctgcgagttgattcttcggacgaggatcgcatttcggaagttcgaaaagttttaaattca
ggaaacttttattttgcatggtctgcatctggagtcagtttggatctgagtcttaatgcc
caccgtagcttgcaagaacacacaactgacaatagatttttctggaatcagtctttgcac
ttgcatctcaagcactacggtgtgaattgtgacgactggttattacgcctcatgtgtggg
ggagtagaaatcagaacaatttatgctgctcataaacaggcaaaggcttgcctcatttcc
agactaagctgtgaacgagctgggaccaggtttaacgtccggggaacaaatgatgatggt
cacgtcgccaattttgtagaaacagaacaggttgtgtacttagatgacactgtttcttcc
ttcatacaaatccggggatctgtcccattgttctgggagcaaccaggattgcaggtggga
tcccatcgtgttcgtatgtcaaggggatttgaagccaatgcacccgcttttgacaggcat
tttaggacacttaagaatttgtatggtaaacaaataatagtaaatctgcttggatctaag
gaaggtgaacatatgctaagtaaggctttccagagtcatctgaaagcttctgaacatgct
gctgatattcagatggtgaattttgactatcatcaaatggttaaaggaggaaaggcagaa
aaattacatagtgttcttaaacctcaagtccagaagtttctggattatggaatttttcat
tttgatggaagtgaagttcaaaggtgccagagtggtacagttcgaacaaactgcttggat
tgtcttgacagaacaaatagtgtgcaggcattccttggtttagagatgctgactaaacag
ttggaagctcttggtttagctgaaaagcctcagttggtgactcgctttcaagaagttttt
cgatcaatgtggtctgtgaatggtgattcaatcagtaagatttacgcaggaactggagcc
cttgaaggaaaggctaagttaaaagatggtgctcgttcagttagtagaacaattcagaat
aacttctttgacagctccaagcaagaagcaattgatgttttgctcctgggaaatactcta
aatagtgatttagctgacaaagctcgagcccttttaactactggaagtttgcgtgtttct
gaacagacattgcagtcagcatcttctaaagtactaaagagcatgtgtgagaatttctac
aagtattcaaagcccaagaaaattcgagtatgtgtgggcacctggaatgtgaatggcggg
aagcagtttcgcagcatagcttttaagaatcagacccttacggactggcttcttgatgcc
cccaagttagctggcatccaggagtttcaagataaaagaagtaaaccaatggatatattt
gcaattggttttgaggaaatggtcgagttgaatgctggaaacattgtgaatgcaagcaca
acaaatcagaagctctgggctgtggaacttcagaagaccatctccagagacaacaagtat
gtgctgctggcctctgagcagttggtgggtgtctgtctgtttgtttttatcagaccacag
cacgctcccttcatcagggatgttgcggttgatactgtgaaaactggaatgggaggcgca
actggaaataagggagcagttgcaatacgaatgctgttccacaccacaagcctctgcttt
gtctgcagccacttcgctgcaggacaatcccaagtcaaagaacgaaatgacgattttgta
gaaatagcacggaagttgagttttccaatgggaaggctgctcttctcccatgactatgtg
ttttggtgtggtgatttcaactaccgaatcgatctccctaatgaggaagtgaaagagctt
atcagacagcaaaattgggattctcttattgcaggagatcagcttatcaatcagaaaaat
gctggacagatttttagaggatttttagaaggaaaagtgacctttgctccgacgtataaa
tatgacttgttttctgatgactacgacactagtgaaaagtgccgcacccctgcatggaca
gaccgtgtcctctggagaagacggaagtggccttttgatagatcagctgaagatttggat
ctcctaaatgctagttttcaagatgaaagcaaaatcctctatacatggactcctggcact
ttgctgcactacggaagggccgagctgaagacttctgaccataggcctgtcgttgccctg
attgatattgatatatttgaagttgaagctgaagagaggcaaaacatttataaagaagta
atcgcagttcagggtccaccagatggtacggtgttagtctcaatcaaaagctctttacca
gaaaataattttttcaacgatgctttgattgatgagcttttacagcagtttacaaatttc
ggtgaagttatactcataagatttgtggaagataaaatgtgggttacgtttttagaggga
agctctgccttgagtgttctgaacctgaatgggaaagagttactgggtaggactataaca
attactttaaaaagtccagactggatcaaaactttggaagaagaaatgagcttagagaaa
atcaacatccccttgccatcatcaaccagctccaccctcctaggtgaagacgcggaggtc
acggccgacttcgatatggaaggtgatgtggatgactatagtgctgaggtagaggagatc
cttcctcagcatctccagccatcttccagttctggccttggcacatcccccggttcttca
ccccggaccagtccctgccagtcacctaccatatcggaggggcctgtgccttccctccca
gtgagaccaagtcgagctccgtccagaacacccgggccccccgcttcacaaagttctcct
gttgacactctgccagcaacacagctgcagcagaaagattcttcccagaccctggaaccc
aagcggcctccccctccccgcccagttgctcctcctgcacgtccagctcccccacaacga
ccgcctccgccttcaggagctaggagtcctgcacctgctagaaaagagtttggaggtgtt
ggagcccctcccagtccgggggtagctaggcgagagatggaagcacccaaaagcccaggg
acgacacggagagataatctaggacgcagtcagcttccacctcaagccggactgccaggc
ccgggacttgctggacacagtgcagccagaccgattattccgccccgtgctggagtcatc
agcgccccccagagccacgcacgggcatctgctgggagactgactcctgaaagccaaagc
aagccctccgaagtactgaaagggtcagctcttcttcccgaacccctgaagcctcaggct
gcccttcctgcgccgcctcctcttgcgccacctgttcagaagatgcaggagcctctcatc
ccggtggccgcacctctgccccaggctgccccacagcccagcctggaaacgcccccgcag
ccaccccctcggagcaggtcatcccacagcttgccttctgagtctccggcacagccgcag
gtgaaaacaaacggagtctccgccgtcagattggactcgccattaaagagtgacccattt
gaagacttgtcattgaacctgcttgctgtatcaaaggctcagccatctgttcacacccca
aacccaagggggttgacgccgttgccttctgcaaccccaagtaacacgaacactctgagt
tctgtaagctgcatgccgacaatgcctccaattccagcccggagtaaatcccaggaaaac
acgcgatgttccccaaacccattcatcccaagctcgagcagcacaaatcctttcaccaac
aggaccgccacccccggaaacccctttcgagctgagtctcaagaatcagaggccacttca
tggttctccaaagaagagcctgttgctccgagtccattctcttcgctgagggctctgggt
cagaacagtaacaagccttcatcctccctggatgggtttaatgacagttttgatccgcag
ggcccgcctgcactaacagtcagcaaccccaaaggatgggtaaccttcgaggaagaagag
gactttggtgtgacagggaagtcagggtccgctcgtccagacgttttcctgggtaagcag
ccaagctcgtctcctggctccaaggtgacgcttggtgatgactggggtagaagtaccaat
gtgtctctctgtgtgttgccagcaagaagaccacccccaccgcctgtccctctgctccca
cctggcaccacccctcccacagaccctttcacagccctggcctctaaggcatcacccacg
ctagacttgacagaaagataa
DBGET
integrated database retrieval system