Capra hircus (goat): 102176286
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Entry
102176286 CDS
T02910
Symbol
TMC5
Name
(RefSeq) transmembrane channel-like protein 5 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chx02000
]
102176286 (TMC5)
03037 Cilium and associated proteins [BR:
chx03037
]
102176286 (TMC5)
Transporters [BR:
chx02000
]
Other transporters
Pores ion channels [TC:
1
]
102176286 (TMC5)
Cilium and associated proteins [BR:
chx03037
]
Other cilia and associated proteins
Stereociliary proteins
102176286 (TMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Mis12
Motif
Other DBs
NCBI-GeneID:
102176286
NCBI-ProteinID:
XP_017896498
UniProt:
A0A452FA18
LinkDB
All DBs
Position
25:16862054..16943800
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AA seq
993 aa
AA seq
DB search
MSAYRNSAYEEDPDYPDYSGFRNHTQGYLKTPGPLNNSDEPSTRSSPYPAESRTSRDYLG
SLAEPDYPGSQSNPDYAGTRSYPYSAGTDYPKPLAEPDYIGSQRNPYQPGSSGEPDYSQS
QRNPDFPGSKGSGYYTGSRINQDYLGSVGEPDYPGAEENLNSSGPRAGSNHPGSRRNLEH
ASPRVKAYIDSLGEPDYPGAESQSNHPHFFGEPDYPGAEDYRNSPDFWGEPNYPGAENGR
DYGSSEDPEMARQMLSRTSSVQPPFHHEGVSPLGTLGREDVDYPERIEMQSVEMANPYPG
APGNGYVNPAYVGDEGPGPAYGDPPLSGHNWLTLPQGQKLIESLIPMTSRDRIKAIRNQP
RTMEEKRNLRKMVDKERSKQSRRILELNCCAQCLNSISLAYRRFKNNLSELLNSISLWQK
TLKVIGGKFGTSVLSYFNFLKWLLKFNIFSFIVTFSFIIIPQLTVMEKNNLQFTGLEFLT
GAGYFTNTVMYYGFYTNSSIRHGSSGASYNMQLAYIFTIGGCLVICFFSLLFSMARYFRN
NFINPHIYSRGIAKLIFCWDFTVTHESAVKLKQKNLSTEIRENLSEIRQENVKLAFNQQF
IRFSAHAAAWVVSSGAAITCCVAVYYLADNNLQFLENHSNPGAVLLLPFVVSCINLVVPR
FYSLFRLVERYEMPRHEVYTLLIRNIFLKISIIGILCYYWLNIVALDSEECWETLIGQEI
YRLLLMDFVFSLADSFLGEFLRRIIGMRLITSIGLQEFDIARNVLELIYAQTLVWIGTFF
CPLLPFIQMITLFIMFYVKNISLMMNFQPPSKAWRASQMMTFFIFLLFFPSFTGVLCTLA
ITIWRLKPSADCGPFRGLPFFIESIYSWINTLNDRRSYPWVVWIYQNLIGSVHFFFILTL
IVLIITYLYWQITEGRKIMIRLLHEQIINEGKDKMFLIDKLIKLQGMEKRANPTLFTLER
RDSEQWGPLHVRQHDAARDLRFRQSFQEDNPKA
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcctacaggaatagtgcttatgaggaagacccagattaccctgactattctggg
tttcgaaatcatactcaggggtatttgaaaactccaggtcctctgaacaactcagatgaa
cccagcaccaggagcagcccatacccagcagagtccagaacaagtcgagactatcttggg
tctctagcagaaccagattatcctggatctcagagtaatccagactatgctggcaccagg
agctatccatactctgcagggacagactatcccaaacctttggcagaaccagattatatt
ggatctcagaggaatccataccagccaggctcatctggagagccagactactctcagtct
caacgaaatcctgattttcctggttccaaaggcagtggatactacacaggctccagaata
aatcaagattatctcggctccgtgggagaaccagactaccctggagctgaggaaaacttg
aactcttctggccccagagccggttcaaaccatccaggctccagaaggaatctggaacat
gctagccccagagtcaaggcatacatagactctctgggagagcctgattatccaggtgct
gaaagtcaatctaaccatccacacttttttggagaaccagactatccgggtgctgaggac
tatcggaactctccagacttttggggagagcctaattacccaggtgctgagaatggtcgt
gattatggctcttcagaggacccagaaatggccaggcaaatgctcagcagaacatcttca
gtccagcccccgtttcaccatgagggtgtcagccccttgggcacccttgggagagaagat
gttgattatcctgaacgcattgaaatgcaatctgtggagatggcaaacccatatccaggt
gctcctggcaatggctatgtgaatcctgcttatgtgggtgatgaaggtcccggcccagct
tatggagacccacccttgtctggacataattggctcactttaccccaaggacaaaagtta
attgagtctctgatacccatgacatctagagacagaattaaagccattaggaatcagcca
aggaccatggaagaaaaaaggaaccttaggaaaatggttgacaaagagagaagtaagcag
tcccgtcgtatcctggagctcaactgctgtgctcagtgcctgaactccatttcactggca
taccgaaggttcaagaacaacctgtcggaactgctcaattccatcagcctgtggcagaag
acgctcaaggtcatcggaggcaagttcggcaccagcgtcctctcctatttcaactttctg
aagtggcttttgaagttcaacatcttctcgttcattgtgaccttcagtttcatcataatc
cctcagctaactgtgatggagaagaacaacctccaattcactggactggaatttttaacc
ggggcgggttattttactaacacagtgatgtactatggcttttacaccaattcttcgatc
cggcatggcagcagcggggcctcgtacaacatgcagctggcctacatcttcacaatcgga
gggtgtttggtcatctgcttttttagtttgctcttcagtatggccaggtatttccggaac
aacttcattaacccccacatttactccagagggatcgccaagctcattttttgctgggac
ttcactgtcactcatgaaagtgcagtaaagctgaaacagaagaatctgagcactgaaatc
agggagaacctgtcagaaatccgtcaggagaacgtcaagttagcattcaatcagcagttt
atccgcttctctgcccacgcggcagcctgggttgtctcttccggagcggccatcacctgc
tgtgtagccgtttattacctggctgacaacaacttacagttcctggaaaaccacagtaac
cctggggcggtgctcttactgccttttgtcgtgtcctgcatcaacctggtcgtgcctcgc
ttctactccctgttcaggctggtggagcgctacgaaatgccgaggcacgaagtctatacc
ctcctgatccgaaatatctttctgaaaatatcaatcattggaattttgtgttactactgg
ctcaacattgtggccctggatagtgaagagtgttgggaaaccctcattggccaagaaatc
taccggctccttctgatggattttgtgttctctttagctgattccttcctgggggagttc
ctgagaagaatcattgggatgcggctgatcacaagtattggcttacaggagtttgatatt
gccagaaatgtgttagaactcatttatgcacaaactctggtgtggattggaaccttcttc
tgtcctctgctgccctttatccagatgattactcttttcatcatgttttacgtcaaaaat
atcagcctgatgatgaatttccagcctccgagcaaagcatggcgggcctcgcagatgatg
actttcttcatctttctgcttttcttcccatctttcactggggtcctgtgcaccttggcc
atcaccatctggagattgaaaccttcagctgattgtggtccgtttcgaggtctgcccttc
ttcattgagtccatctacagctggatcaacaccctgaatgacaggcgcagctacccgtgg
gttgtttggatctaccagaacctcatcgggagcgtgcacttcttcttcatcctcaccctc
attgtcttaatcatcacttacctttactggcagatcacagagggaaggaagattatgata
agactgctccatgaacagatcattaatgagggcaaagacaaaatgttcctgatagataag
ttgatcaagctgcaaggtatggagaagagagcaaaccccaccttatttacactggaaaga
agagattcggagcaatggggccctctgcatgtcaggcaacatgatgctgctcgagacctg
agattcaggcaatcatttcaagaagataatccgaaggcctga
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