Capra hircus (goat): 102176494
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Entry
102176494 CDS
T02910
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
chx
Capra hircus (goat)
Pathway
chx05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
102176494 (JMJD1C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
chx03036
]
102176494 (JMJD1C)
Chromosome and associated proteins [BR:
chx03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
102176494 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
102176494
NCBI-ProteinID:
XP_017897700
UniProt:
A0A452FMA1
LinkDB
All DBs
Position
28:25965460..26286259
Genome browser
AA seq
2536 aa
AA seq
DB search
MAVETRPELVGKRFLCLALGEEARLERGESGRCWRGWRAGVIRAVSHRDSRNPDLAVYVE
FDDLEWDKREWVKVYEDFSTFLVEYHLIWARRINPSQTQGSKSKQIQWPALTFKPLVEKS
VPSSITAVEFLVDKQLDFLTEDSAFQPYQDDIDSLNPVLRDNPQLQEEVKVWVKEQKVQE
IFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQM
TFLDDVVHSLLKGENIGITSRRRSRASQNSNTVHGHYTRAQANSPRPAMNSQTAVPKQNS
HQQQRNIRPNKRKGSDSSIPDEEKMKEEKYDYIARGENPKGKKQVMNKRRKAEEDEKKLN
MKRLRTDNVSDFSESSDSENSNKRIINNSSEQKPENELKNKNTAKINGEEGKSQNNEKAG
EETLIDSQHPWDQIQEDKKHEETEKQKSVDFQRQEKMIIHSSEQATLSDHNSSDLLLQER
NTEKTHTMELLPKEKFVSRPPTPKCVIDITNDTNTEKVAQETSSSTFGLQTLQKMDPNVS
DSKHSIANAKYLETGNQDSDQNWVSDVVKVDLTQSNVRNAPSGNENLSVEKEKNQYVSYL
SSLSAVSVTEDKLHKRSPPPETIKSKLNTSVDAHKTKSNPSPEVVKPKVNHSPDSVKSKA
TYANSQAAGERRPANKIEHELSRCSFHPVPTRGSTLETTKSPLIIDKNEHFTVYRDPALI
GSDTGANHISPFLSQHPFPLHSSSHRTCLNPGTHHPALTPAPHLLAGSSSQTPLPTINTH
PLTSGPHHSVHHPHLLPAVLPGVPTASLLGGHPRLETAHASSLSHLALAHQQQQQLLQHQ
SPHLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSKWVHPENAVNAEPSLRRNSP
SPWLHQPTPVTSADGIGLLSHIPVRPSSAEPHRPLKITAHSSPPLTKCLVDHHKEELERK
AFIEPLRSVASTSAKTDLDLNRSQTGKDGHLHRHFVDPVLNQLQRPSQETGERLNKYKEE
HRRILQESIDVAPFTTKIKGLECDRDNYSRVASSSSSPKSHLIKQDKDIESDLYKMKHSV
PHSLPQSNYFTTLSNSVVNEPPRSYPSKEISNIYTEKQSNTLATAANPQTLTSFISSLSK
PPPLIKHQPESEGLVGKVPEHLSHQIASHSVTTFRNDCRSPTHLTVSSTNTLRSMPALHR
APVFHPPIHHSLERKESSYSSLSPPTLTPVMPVNAGGKVQESQKPPTLIPEPKDTQASFK
SSSEQSLTEMWKSNNNLSKEKAEWHVEKSSGKAQAATASVIVRPPSSTKLDSVPAVQLAP
RDRASERSSLGANQTDCLKPAEAGESGRIILPSVNSDSAHIKSEKNSQAVSQGSVPSSVM
SAVNTVCNTKTDTFTSAAATPSVSSWGGSEIIYSLSNTILASKSLECTSSKSVSHSVAQT
QECTVSITAPVTPASSKTGSAVQPNSGFSGTTDFIHLKKHKAALAAAQYKSSNVSETEPN
AAKNQTSSASHLLDSTVVCSTINKADSVGNGQASQTSQPNYHTKLKKAWLTRHSEEDRNT
SKMESSGSSVSEIIKPCSVNLIASTSNDLQNSADSKIIVDKYVKDDKVNRRKAKRTYESG
SESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKRKGEMEEDLKPNGILSRSAKEKSKLK
LQSNNNSAGIPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCRECRLIRSKKGEE
PTHSPVFCRFYYFRRLSFSKNGVVRIDGFSTPDQYDDEAMSLWTHENYDDDELDIETSKY
ILDIIGDKFCQLVTSEKTALSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCG
FVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHTLR
EKYGIKSHCHCTNKQNIQVGNFSPMNGVSQVLQSVLNHSNKISLCMPESQQQSTPQKPES
NGSSSPGSDVSTDSKLASPESQSPLHWLADLAEQKAREEKKENKEFALEKQIKEEREQDD
PDSPSSRTSPPVSQNNEQGSTLRDLLTTTAGKLRVGSTDAGIAFAPVYSMGTPSGKSGRT
MPNILDDIIASVVENKIPPNKASKINVKSEFKEEPKESRKCAMDENNKLYSDIPHSWVCE
KHILWLKDYKNTNNWKLFKECWKYGRPAVVSGVHKKMNISLWKADSISLDFGDHQADLLN
CKDSIISNANVKEFWDGFEEVSKRQKTKSGETVVLKLKDCPSGEDFKTMMPARYEDLLKS
LPLPEYCNPEGKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHVEVSDVVN
ILVYVGIAKGNGILSKAGILKKFEEEDLDDILRKRLKDSSEIPGALWHIYAGKDVDKIRE
FLQKISKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVKTCTLIQFLGDAIVLPAGA
LHQVQNFHSCIQVTEDFVSPEHLVQSFHLTQELRLLKEEINYDDKLQVKNILYHAVKEMV
RALKIHEDEVEAMEEN
NT seq
7611 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagacgcggccggagctggtggggaagcggttcctgtgcctggcgctcggc
gaagaggcgcggctggagcgcggggagagcggacgctgctggcggggctggcgagcgggg
gttatccgagcggtgtcacacagggacagccgcaatcccgacctggcggtgtatgtggaa
tttgatgatcttgagtgggataaacgagagtgggttaaagtttatgaagatttttcaacc
ttcttggtggaataccacttaatctgggccagaaggatcaaccctagccagactcaggga
tcaaagagcaaacagattcagtggcctgccttgactttcaaacccctggttgaaaaaagt
gtacccagttcaatcactgcagtagaattccttgtagataaacaactggattttttaact
gaagatagtgcctttcagccctaccaggacgacatagacagcctaaacccagttctcagg
gacaacccgcaacttcaggaagaagtgaaagtctgggtaaaggaacaaaaggttcaggag
atttttatgcaaggtccttactccttgaatggatacagagtgagagtatatagacaagac
tctgccacccagtggttcactggcataattactcatcatgatctcttcactcgcaccatg
atcgttatgaatgatcaggtactagaaccacagaatgtcgatccttctatggttcaaatg
acctttctagatgatgttgttcactctttgttaaaaggtgaaaatattggcattacatca
cggcgaaggtctcgtgccagtcaaaatagcaacactgttcacggtcattatacacgtgcc
caagcaaatagtcccagaccagcaatgaactcccaaactgctgtaccaaaacagaattca
caccagcaacaaagaaatattcgtccaaataagaggaagggctcagatagcagtatacca
gatgaagagaagatgaaggaagaaaagtatgattatatagcacgaggagaaaatcctaaa
ggtaaaaaacaggtgatgaacaaaagaaggaaagctgaggaggatgaaaagaaactaaat
atgaaaagactgcggaccgacaatgtttcagacttctctgagagtagtgactcagaaaat
tcaaataagagaataataaataattcctcagagcagaagccagagaatgagttgaaaaat
aaaaacactgcaaagataaacggagaagaaggaaaatctcagaataatgagaaggcagga
gaagagacactaatagatagccagcatccctgggatcaaatacaggaagataaaaaacat
gaagaaacagagaaacagaagtctgttgactttcagcgtcaagaaaaaatgattatccat
tcatcagaacaggccacactttctgatcataattctagtgatttacttcttcaggaacgt
aatacagagaagacacacacaatggaattattaccaaaggagaagtttgtatccagaccg
cccactccaaaatgtgttattgatattacaaatgacactaacacagaaaaggtggctcag
gaaacctcaagtagtacctttggccttcaaacacttcagaaaatggatcctaatgttagt
gattcaaaacattcaattgcaaatgcaaaatacttggaaacaggaaaccaagattctgac
cagaactgggtcagtgatgtagttaaagtagatttaacccaatcaaatgtaaggaatgct
ccttcaggaaatgaaaacttgagtgtggaaaaggagaaaaatcagtatgtctcttactta
tcttctctaagtgctgtttctgtcacagaagataagctgcataagcgaagcccaccccca
gaaaccataaaatctaaacttaatacttcagtagatgctcacaagacaaaatccaacccc
tcacctgaagttgttaagcctaaagtcaaccattcccctgattctgtgaagtctaaagcc
acttacgcaaacagccaagctgctggtgaaagaagaccagcaaataagatagagcatgag
ttgtcaagatgcagtttccacccggttcctactagaggcagtacattagaaactacaaaa
agccctctaatcattgataaaaacgaacattttacagtttacagagatcctgcacttatt
gggtcagatacaggagctaatcacatttcaccttttttaagccagcatccttttcctctt
cattcttcatcccatagaacatgtttaaatccaggtacccatcatcctgccttaactcct
gcacctcacttactggctggatcatccagtcaaactccattacctaccatcaacactcat
cctctgactagtggtccacaccattctgttcatcaccctcatttacttcctgctgtgtta
cccggagtgcctactgcctccttacttggtggccacccacgactagagactgctcatgcc
agcagcttgagccacttagcgttagcacaccagcaacagcagcagttgttacagcaccag
tcacctcatcttcttggacaagcccatccatctgcttcatataatcagcttggactttat
ccaattatttggcaatatccaaatggaacacatgcatactcaggacttggtctgccttct
aagtgggttcacccagaaaatgcggttaatgctgaaccttcgttaaggaggaattctccc
agtccttggttacatcaacctacccctgtgacctcagcagatggtattggattacttagt
cacattcctgtcagaccttccagtgcagaacctcatcggcctcttaaaatcacagcacat
tccagtccaccattgacaaaatgtttagtagatcaccataaagaagaattggagaggaaa
gctttcattgaaccgttgcgttctgttgcatccacatcagccaaaactgacctggatcta
aataggtcacagactggaaaagatggtcacttgcataggcattttgtggatcctgtattg
aatcagttacagagaccatcccaggaaactggagagagattaaacaaatataaggaggag
caccgtcgaattcttcaagaaagtattgatgttgctccctttacgactaaaatcaagggt
cttgagtgtgatagagataactattccagggtagcatcgtcatcttctagccctaagagc
catctcatcaaacaagacaaggatatagaatcagatctttataaaatgaagcactcagtg
cctcacagtttgcctcaaagtaactatttcactacattgtctaatagtgtagtcaatgag
ccaccaaggtcatacccctccaaagagatttcaaatatttacactgaaaaacagagtaat
acgcttgcaacagcagctaatcctcaaactctgacttcgtttatatcatctctttcaaag
cctccacctttgataaaacatcagccagaaagtgaaggtttagtaggcaaggtaccagaa
catctttcccatcaaattgcttctcactcagtaacaactttcagaaatgactgtagaagt
cctactcatttgacagtttcttctacaaatacactccggagtatgcctgctttacataga
gcaccagtatttcacccaccaatccatcatagcctagaaagaaaggaaagcagctacagt
agcctttcccctccaacgttaactccagtgatgcctgtaaatgctggtggaaaagttcaa
gaatcacaaaagcctccaacactgattcctgagccaaaagatactcaggcaagttttaag
agttcttctgaacagagtttgacagaaatgtggaaatctaataataacctcagcaaagag
aaagctgaatggcatgtagagaaaagcagcggaaaggcacaggctgccacggcatctgtc
atcgtgcgtccaccttctagtacgaagcttgacagtgtgccagcagtacagttagctccc
agagatcgagctagtgagagatcttcacttggggcaaatcaaacagattgcctcaaacca
gcagaagctggagagagtggaagaatcattctgccaagtgtgaattcagacagtgctcac
ataaaatccgaaaaaaactctcaggctgtctcacagggcagtgttcccagttcagtcatg
tctgctgtaaatacagtgtgtaataccaaaacggatacattcacatctgctgccgctacc
cccagtgtttccagctggggtggttcagaaataatttactcattatcaaataccattttg
gcctctaaatccttagaatgtacctcttcaaaaagcgtcagtcattcagtggctcaaaca
caagaatgcacggtcagcatcacagctccagttacaccagccagtagtaagacaggaagt
gctgttcagcccaactctgggttttcaggcacaactgattttattcatttaaagaagcac
aaggcagcattggctgcagctcaatataaaagtagtaatgtcagtgagactgagcctaat
gctgcgaaaaatcagacatcttcagcctcccatctcttagatagcactgtagtctgtagt
acaataaacaaagcagactctgtaggaaatgggcaagcgtcccagacaagccaaccaaac
taccatactaaactgaaaaaggcctggctcacgagacattcagaagaagacagaaatacc
agtaagatggaaagttcagggagttctgtatcagaaattattaagccatgttctgtcaat
ttaatagcctctacatctaatgatctacaaaatagtgcagatagtaagatcatagttgat
aaatatgtaaaagatgataaagtaaatagaagaaaagccaaacgaacttatgaatctggc
tccgaaagtggagattcagacgaaagtgaaagcaaatcagagcaaaggactaaaaggcaa
cctaagccaacttacaaaaagaagcaaaatgatcttcaaaagagaaaaggtgaaatggaa
gaagatttaaaacccaatgggattctcagcaggagtgccaaagagaaaagtaaattgaag
ttgcagagcaacaataatagtgctggcatccctcgttcagtattgaaggattggcgtaaa
gtcaagaagctgaagcaaactggggaatcctttttacaggatgactcctgctgtgagata
gggcctaatttgcaaaagtgccgagaatgtagacttattcggagtaaaaagggggaagaa
ccaactcactcaccagtgttttgtagattttactactttagacgattgtcatttagtaaa
aatggagtggttagaatagatggtttctctactcctgaccagtacgatgatgaagctatg
agtttatggacacatgaaaattatgacgatgatgaactagacatagaaacgtcaaaatac
atcttggatataataggtgataagttctgtcagttggtaacatctgaaaaaacagctttg
tcctgggtgaaaaaggatgccaaaattgcctggaaaagagcagtgagaggagtccgggag
atgtgtgatgcatgtgaagcaacattgtttaacattcactgggtctgccagaaatgtgga
tttgtggtctgcttagattgttacaaggcaaaggaaaggaagagttctagagataaagaa
ttgtatgcttggatgaagtgtgtgaagggacagcctcatgatcacaaacatttgatgcca
actcaaattatccctggttctgttttgacagatcttttggatgcgatgcacactcttaga
gaaaaatatggtattaaatcccattgtcattgtactaacaaacagaatatacaagttgga
aatttttctcctatgaatggtgtgtctcaagttttacagagtgttcttaatcacagtaat
aaaatttctctgtgcatgcctgagtctcagcagcagagcacccctcagaagcctgaaagt
aatggcagcagcagtccagggagcgatgtgagcacagacagcaagttagcttctccagaa
tcccagtcacccctgcactggttagcagatcttgcagagcaaaaggccagagaggaaaaa
aaagaaaacaaagaatttgcccttgaaaagcaaattaaagaagagagagaacaagatgat
cctgattctccaagtagtagaacatcacctcctgtatcccagaataatgagcaaggttca
acattacgagatttgctgaccacaactgctggcaagctacgcgtgggttctacagatgct
ggcattgcctttgcaccagtttattcaatgggaacccctagtggtaaaagtggaaggact
atgccaaacattcttgatgacataattgcttcagttgttgaaaacaaaattccaccaaat
aaagcctctaagataaatgtaaaatcagagttcaaagaagaacccaaagaaagcagaaaa
tgtgccatggatgaaaacaataaattgtacagtgatataccacattcctgggtctgcgag
aagcacattctgtggcttaaggattataaaaatactaataattggaagcttttcaaagag
tgttggaaatatggacgacctgcagtggtttctggcgtgcataagaaaatgaacattagc
ttgtggaaggcggactcaattagtctcgattttggagaccaccaagctgatctcctcaac
tgcaaagacagcattatttcaaatgccaatgttaaggaattctgggatggttttgaggaa
gtttcaaaacggcaaaaaacaaaaagtggagaaacagttgttttaaaattgaaagattgc
ccttcaggagaagacttcaagactatgatgccagcaagatatgaagatcttttaaaaagc
ctgccattgccagaatattgtaatccagaaggaaaattcaacctggcctctcatttaccg
ggattttttgtgcgccctgatctaggacccaggttgtgcagtgcttatggggtagctgct
gctaaagatcatgatataggaacaacaaatctgcatgttgaagtgtctgacgttgtaaat
attctcgtctatgtcggcatagcaaaaggaaatggcattctctcaaaagcaggaatactc
aagaaatttgaggaagaagatttggatgacattttaagaaaacgattgaaggactcaagt
gaaataccgggtgctctgtggcatatttatgctgggaaagatgttgacaagatacgggaa
tttcttcagaagatttcaaaagaacaaggccttgaagttctaccagaacatgatccaata
cgtgaccagagttggtatgtgaacaaaaagcttcgtcaaagactgcttgaggaatatgga
gtcaaaacctgcactcttattcagttcctcggtgatgccattgtcttaccagcaggagca
cttcatcaggtacagaattttcacagctgtattcaggtaactgaagactttgtgtctcca
gaacatctcgtgcagtcatttcatttaacacaagaactaagacttttgaaggaagaaatc
aattacgatgataaactacaggttaaaaatatcttgtatcatgcagtcaaggaaatggtg
agagctttgaagatacatgaagatgaagtagaggctatggaagaaaattag
DBGET
integrated database retrieval system
