Capra hircus (goat): 102176722
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Entry
102176722 CDS
T02910
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X4
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
chx
Capra hircus (goat)
Pathway
chx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102176722 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102176722 (CNOT1)
Messenger RNA biogenesis [BR:
chx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102176722 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102176722 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
102176722
NCBI-ProteinID:
XP_005692106
EnsemblRapid:
ENSCHIG00000010452
UniProt:
A0A452E3Z9
LinkDB
All DBs
Position
18:complement(27648590..27732620)
Genome browser
AA seq
2376 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSTDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTGALGLPAVNSDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHN
PAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDV
RQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLE
LISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLL
VLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINI
APRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQLINALVL
YVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSH
THYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNH
EFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttgttacgctgcctattttcgcatgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcagtttctgattcaggagtgtgcgtca
ctgattacgaagccaaattttatctcaacgctgtcctatgccattgataatccattgcac
tatcagaagagtttaaagcctgcaccccacttatttgcccagctgagtaaagttctcaag
ttaagcaaagtacaagaggtaatttttggccttgccctcttgaattcttccagcacagat
ctcagaggttttgctgcccagtttatcaaacagaagcttccagatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaggaaggtggcttccaagatatagcaatagaggtc
ctacacctcctcctgtcccatctcctctttgggcagaagggagcctttggagttggacag
gaacagatagacgcctttcttaagacgctgcgcagagattttccccaggaacgctgtccc
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacagaatcctg
cctgattccggaggggtagctaaaaccatgatggagagctcattggctgattttatgcaa
gaagtgggctatggcttttgtgcaagtattgaagaatgtcgcaatataatcatgcagttt
ggtgttcgggaggtcacagctgcccaggttgcaagagttttaggaatgatggctcgaact
cattcaggattaacagacggaattccattacagagtatctctgctcctggcagtggaatc
tggagtgatggaaaagataaaagtgatggagcacaggcacacacatggaatgtagaagtc
ttgatcgatgttctcaaagaactgaatccgagtttgaatttcaaggaagtaacttatgaa
ctggaccatcctgggtttcaaattcgtgacagtaaaggacttcataatgtagtctatggc
attcaaaggggtctgggtatggaagtgttccctgtagatctcatatacagaccttggaaa
catgcagaaggccagctctccttcattcagcattcccttataaatccagagatcttctgt
tttgccgactatccctgtcatactgttgccactgatattctgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcttggatttgattgaatctctgctaaggctt
gcagaggtagggcaatatgagcaagtcaaacagctcttcagcttccctatcaaacactgt
ccagacatgctggtattggccttattacaaatcaacacctcctggcacaccttacgccat
gaactcatctccactctgatgccaattttccttggaaaccaccctaactcagctataatt
ttgcactatgcatggcatggacagggacagtctccctcaatccgccaacttatcatgcat
gcaatggcagaatggtacatgcgaggggagcagtatgaccaggccaaattgtctcgaata
cttgatgtggcccaggacttgaaggctttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcttcacgtcgtgaatacctcaaacttgacaagtgg
ctcacagataaaattcgagagcatggagagccttttatccaggcttgtatgactttttta
aagagacggtgtccttctattttgggtggacttgccccagagaaagatcagcccaaaagt
gctcaacttcctccagaaaccctggcgacaatgttggcctgtttacaagcttgtgcaggg
agtgtttctcaggagttatcagaaaccatcctcaccatggtggccaattgcagtaacgtt
atgaacaaggctaggcaaccaccgccgggagttatgccaaaaggacgccctcctagtgct
agcagcttggacgccatttctcccgttcagattgaccctcttgctggaatggcatctctt
agtataggtggttcagctgcccctcacacccagagtatgcagggctttcctccaaatttg
ggttctgcattcagtaccccacagtcaccagcaaaagcatttccacccctttcaacccca
aatcagacaactgcattcagtggtattggaggactttcatcacagcttccagtaggtggt
cttggcacaggcagcctgactggtataggaactggggctcttggactccctgcagtgaat
agcgatccttttgtacagaggaaactgggcacctctggactgaaccagcctacattccag
cagagtaagatgaaaccttccgacttgtctcaggtgtggccagaggcaaatcagcacttt
agtaaagagatagatgatgaagcaaacagctatttccagagaatatataatcacccacca
catccaaccatgtctgttgatgaggtattagaaatgctacagagatttaaagattctacc
ataaagagggaaagagaagtatttaactgtatgctgaggaacttgttcgaagaatatcgg
ttcttcccccaatatcctgataaagagttacatataacagcttgcctgtttggtgggata
atcgaaaaaggactggtcacttacatggcattaggtttggccctacgatatgttcttgaa
gccttacgcaagccttttggatccaaaatgtattattttgggattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttcaatcagtcac
tttatgcaatttccacatcatttacaggagtatattgagtatggacagcaatctagagat
cctcctgtgaaaatgcagggctctatcacaacccctggaagtattgcactggctcaagcc
caggcccaggcccaggttccagcaaaagctccccttgctggccaggttagcactatggta
accacctcaacaaccaccactgttgctaaaacggttacagtcaccaggccaactggagtc
agctttaagaaagatgtgccaccttctattaatacaacaaatatagatacattgcttgtg
gccacagatcaaactgagagaatcgtagagcccccagaaaatatccaggagaaaattgct
tttatcttcaacaacctctcccagtcaaatatgacacaaaaggttgaagaactaaaggaa
actgtgaaggaagaatttatgccttgggtttcacaatacctggttatgaagagagtcagt
attgagccaaactttcacagcctgtattctaacttccttgacacgctgaaaaatcctgaa
tttaataagatggttctgaatgagacctatagaaacatcaaagtactcctgacctctgat
aaagctgcagccaatttctccgatcggtctttgctgaagaacttgggacattggctagga
atgattacactagctaaaaataaacccatcttacacactgacttggatgtaaaatctttg
ctgctagaggcttatgttaaaggacagcaagagttgctctatgtagtgccctttgttgcc
aaagtcttagaatctagcattcgtagtgtggtttttaggccacccaacccctggacaatg
gctattatgaatgtattagctgagctacatcaggaacatgacttaaagttaaacttgaag
tttgaaattgaggtcctctgtaagaatcttgcattagacatcaatgagctaaaacctgga
aacctcctaaaggataaagatcgcctgaagaacttagatgagcaactctctgctccaaag
aaagatgtcaagcagccagaggagctccctcctatcacaaccacaacaacttctacaaca
ccagctaccagcaccacctgtacagccaccgttccaccacagccacagtacagttaccat
gacatcaatgtctattccctcgcaggcctggcaccacacattactctaaacccaacaatt
cccttgtttcaggcccatccacagctgaagcagtgtgtgcgccaagcaatcgaacgggcc
gtccaggagctggtccatccggtggtggatcgatcaattaagattgccatgactacttgt
gagcaaatagtcaggaaagattttgccctggattctgaggaatctcgaatgcgaatagca
gctcatcacatgatgcggaacttgacagctggaatggccatgattacttgcagggagcct
ttactcatgagcatatcaaccaacctgaaaaacagttttgcctcagcccttcgtactgca
agcccacaacaaagggaaatgatggatcaggcagctgctcagttagctcaggacaattgt
gaattagcttgctgttttattcagaagactgcagtagaaaaagcaggccctgagatggac
aagagattagcaactgaatttgagctgagaaaacatgctaggcaagaagggcgaaggtat
tgtgatcctgttgtgttaacataccaagctgagcggatgccagagcaaatcaggctgaaa
gttggtggtgtggacccaaagcagctggctgtttatgaagagtttgcacgcaatgtgcct
ggcttcttgcccacaaatgatttaagtcagcccacaggatttttagcccagcccatgaag
caagcttgggcaacagatgatgtagctcagatttatgataagtgtattacagaactggag
cagcatcttcatgctatcccgccaactttggccatgaacccccaagctcaggccctcaga
agtcttctggaggttgtagtattatcacggaactctcgagatgccattgctgctcttgga
ttgctccagaaggctgtagagggcttactggatgccaccagtggtgctgatgctgacctc
cttcttcgctacagagagtgtcacctcttggtcttgaaagctcttcaagatggccgggca
tatgggtctccatggtgtaacaaacagatcacaaggtgcctaattgagtgtcgggatgaa
tacaaatataatgtggaggcagtggagttgctaattcgcaatcatttggtcaatatgcaa
cagtatgatcttcacctcgcccagtcaatggagaatggtttaaactacatggctgtggca
tttgctatgcaattggtaaaaatactgctggtggatgaaaggagtgttgcccatgttact
gaggcagatctgttccacaccattgaaaccctcatgaggattaatgctcactccagaggc
aatgctcctgaaggattgccccaactgatggaagtagtgcgatccaactatgaagcaatg
attgatcgtgctcatggaggccctaactttatgatgcattctgggatctctcaagcctca
gagtatgatgatcctccaggcctgagggagaaggcagagtatcttctgagggaatgggtg
aatctctaccattcagcagcagctggtcgtgacagtaccaaagctttctctgcgtttgtt
ggacagatgcaccagcaaggaatcctgaagactgatgacctcataacaaggttctttcgt
ctgtgtactgaaatgtgtgttgaaatcagttaccgtgctcaggcagagcagcagcacaat
cctgctgctaatcccaccatgatccgagccaagtgctatcacaacctggatgcctttgtc
cgactcattgcactgctagtaaagcactcaggggaggccaccaacactgtcacaaagatt
aatctgctgaataaggtccttggtatagtagtgggagttctcctacaggatcatgatgtt
cggcaaagtgaatttcagcaacttccctaccatcgaatttttatcatgctgctcttggaa
ctcaatgcacctgagcatgtgttggaaaccattaatttccagacacttacagctttctgc
aacacattccacattttgaggcctaccaaagctcctggctttgtgtatgcttggcttgaa
ctgatctcccatcggatatttattgcaagaatgctggcacacacgccacagcagaaggga
tggcctatgtatgcacagttactgattgatttattcaaatatttagcgcctttccttaga
aatgtggaactcaccaaacctatgcaaatcctctacaagggcactttaagggtgctgcta
gttcttttgcatgattttcccgagttcctttgtgattaccattatggattctgtgacgtg
atcccacctaattgtatccagctaagaaatctgatcctgagtgccttcccaagaaacatg
aggctcccagacccattcactcctaatctgaaggtggatatgttgagtgaaattaacatt
gctccccggattctcaccaattttactggagtgatgccacctcagttcaaaaaggatttg
gattcctatcttaaaactcgatcacccgtcactttcctgtctgatctgcgcagcaaccta
caggtatccaatgagcctggtaatcgctacaacctccagctcattaatgcactggtgctc
tatgtagggactcaggccattgcacacatccacaacaagggcagcacaccttcgatgagc
accatcacgcactcagctcacatggacatcttccagaacctggctgtggatttggacact
gaaggtcggtatctcttcttgaatgcaattgcaaatcagctgcggtacccaaatagccac
actcactacttcagctgtaccatgctgtacctttttgcagaggccaacactgaagctatt
caagaacagatcacaagggttcttttggaacggttgattgtaaataggccacatccttgg
ggtcttcttattaccttcattgagctgattaaaaatccagcatttaaattctggaaccat
gaatttgtacactgtgccccagaaattgaaaagttattccagtccgtcgcacagtgctgc
atgggacaaaagcaggctcagcaagtaatggaagggacaggtgccagttag
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integrated database retrieval system
