Capra hircus (goat): 102176835
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Entry
102176835 CDS
T02910
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha isoform X1
KO
K04842
voltage-gated sodium channel type X alpha
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
chx04040
]
102176835 (SCN10A)
Ion channels [BR:
chx04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102176835 (SCN10A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
CcmD_alt
GPHH
Na_trans_cytopl
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
102176835
NCBI-ProteinID:
XP_017893964
LinkDB
All DBs
Position
22:complement(11967702..12055185)
Genome browser
AA seq
1982 aa
AA seq
DB search
MEFPFGSLETTNFRRFTPESLVEIEKRIAAKQESKKVKEKFRRQKDQKEKPRPQLDLKAC
NQLPKFYGTLPAELIGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSYPLWFSLFITITILVNCVGMTRTELPERMEYVFTVIYTFEALIKILARGF
CLNEFTYLRDPWNWLDFSVITLAYAGEVTDLRGISGLRTFRVLRALKTVSVIPGLKVIVG
ALIHSVKKLADVTILTVFCLSVFALVGLQLFKGNLKNRCVKNCTAVNETANYSSHEKQEW
NYCQRDPDYYTNKEGTSDPLLCGNGSDAGHCPEGYFCLKTSDNPDFNYTSFDSFAWAFLS
MFRLMTQDSWERLYQQTLRASGKIYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATI
DEIEAKEKKFQEALEMLRTEQEVLAALGVDTASLQSHNGSPLASKTASERKHRMKSRVSE
GSTDDNKSLRSESYNQHRMSFLGLTAGRRRASHGSVFHFQAPGRDISFPDGVTDDGVFPG
DHESRRGSLLMLRGAGQQGPLPRSPLPQTLNRGSGCGEDGAPKMTTGELAPGVIEVSASD
AGQKTFLTADYLNEPFRVQRAMSVVSIMTSVLEELEESKQRCPPCLTSLAQKYLIWDCCP
TWVKLKTLLFAIVMDPFAELTITLCIVVNTVFMAVEHYGMSPAFEAMLQIGNIVFTVFFT
AEMVFKIIALDPYYYFQKKWNIFDCIIVTVSLIELGAARKGSLTVLRTFRLLRVFKLAKS
WPTLNTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQLLGENYCHKREKISAPNEDWPR
WHMHDFFHSFLIVFRILCGEWIENMWACMEVGQKSICLILFLTVMVLGNLVVLNLFIALL
LNSFSADNLTPPEDDGEVNNLQVALARIQVFGQHTKRALCSFLSRPCLLPQPKAEPQLVV
KLPLSTSIAKNHIAADTALGSPGRLPALRSPRDNHSDFITDPNIWVSVPIAEGESDLDDL
EENGEEDAQSTRQEVIPQRQEQLQQVGKYEDHLPPRSPGSGISSEDLTPYLGEKWKDEAP
AQGPAEGADDTSSSEGSTVDCLDPEEILRKIPELADDLDEPDDCFTEGCVHHCPCCRVNS
SRFPWATGWQVRKACFRIVEHSWFESFIVFMILLSSGALAFEDFYLDRKPTVKALLEYTD
RVFTFIFVFEMLLKWVAYGFKNYFTNAWCWLDFLIVNISLTSLIAKALQYSDMAPIKALR
TLRALRPLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFQKC
INKTNEGFLLVPWSTVNNMSDCERQNHTGSLFWVNVKVNFDNVAMGYLALLQVATFKGWM
DIMYAAVDSRDVNFQPKWEDNVYMYFYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGG
QDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQTFDIVIMVLICLNM
ITMMVETDEQSEKKTKVLNKINQFFVAVFTGECVMKMFALRHYYFTNGWNVFDFVVVVLS
IGSLVFSAIVTSLGSLFSPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNI
GLLLFLVMFIYSIFGMASFATVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPI
LNTGPPYCDPNLTINNSTRGDCGSPIVGIIFFTTYIIISFLIVVNMYIAVILENFNVATE
ESTEPLSEDDFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNRNVLIQMDL
PLVPGDKIHCLDILFAFTKNVLGESGELDSLKANMEEKFMATNLSKASYEPIATTLRWKQ
EDISATVIQKAYRSYMRHRSRTIASPAGVPRAEEGAASLPDEGFAALIANENCTLPDKSE
TASTTSFPPSYDSVTRGLSDQVNLSTSSSMHNEGEAVSKEAAGPSCGPSSKGTSSSDVSA
AL
NT seq
5949 nt
NT seq
+upstream
nt +downstream
nt
atggaattcccctttgggtccctggaaactaccaacttccgtcgattcaccccggagtcc
ctggtggagattgaaaaaagaattgctgctaagcaagagtcaaagaaagtcaaagagaag
ttcaggaggcagaaggaccagaaagagaagcctcggccccagctagacttgaaagcctgc
aaccagttgcccaagttctacggtacgctcccggctgagctgattggggagccgctggag
gatctggaccccttctacagcacacaccggacatttatggtgctgaacaaagggaggacc
atttcccggtttagcgccactcgggccctgtggttattcagtcctttcaacctgatcaga
agaacagccatcaaagtgtccgtccactcatatcctttgtggttcagtttatttataacc
atcactattttggtcaattgtgtgggcatgacccgaacagaacttccagagagaatggag
tatgtcttcactgtcatttatacctttgaagccttgataaagatattggcaagaggattt
tgtctaaatgagttcacttacctgagagatccttggaactggctggattttagtgtcatc
actctggcctacgctggtgaagtgacagacctccgagggatctcaggcctgcggacgttc
agagtccttcgagctttaaaaaccgtgtctgtgatcccggggctgaaggtcatcgtgggg
gccctgatccactcggtgaagaagctggctgacgtgaccattctcactgtcttctgcctg
agtgtctttgccctggtgggcctgcagctcttcaagggcaacctcaagaacagatgtgtc
aagaactgcacagctgtcaatgagacagccaattactcctctcacgaaaaacaggagtgg
aattactgccaacgggacccagattactataccaacaaggaaggcacctctgacccctta
ctctgtggcaatggatctgatgcaggccactgccctgaaggttatttctgccttaagaca
tctgacaacccagattttaactataccagctttgattccttcgcttgggcttttctctca
atgtttcgcctcatgacacaggattcctgggaacgcctctaccagcagaccctgagggct
tctgggaaaatctatatggtgtttttcgtgcttgttatcttcctggggtctttctacctg
gtcaatttgatcttggctgtggtcaccatggcatatgaggagcagaaccaggcaaccatt
gatgaaattgaagccaaggagaagaagttccaggaggcccttgagatgctccggacagag
caggaggtgcttgcagcactgggggttgacacagcctctctccagtctcacaatggatcc
cccttggcctccaaaactgccagtgaaagaaaacacagaatgaagtcaagggtgtccgag
ggctccacagacgacaacaagtcactccggtctgagtcttacaaccagcaccgaatgtct
ttcctaggcctcaccgctgggagacgccgggctagccacggcagtgtgttccacttccag
gcccctggccgagacatctcattccctgatggggtcacagatgatggagtctttcctgga
gaccatgaaagccgtcgtggctctctgctgatgcttaggggtgcaggccagcaaggcccc
ctccctaggagtccactgcctcaaaccctcaaccgcggctcagggtgtggagaagatgga
gctcccaaaatgaccactggagagcttgcccctggagtcatcgaagtctcggcatctgat
gcaggacagaagactttcctaacagcagattacttgaatgaacctttccgagtccaaagg
gcaatgagtgttgtcagtatcatgacctctgtcctcgaggaactcgaggagtctaaacag
aggtgcccaccctgcttgaccagcttggctcagaagtatcttatctgggattgctgcccc
acatgggtgaagctcaagacacttctcttcgcaattgtgatggacccctttgcggagctc
accatcaccctgtgcatcgtggtgaacaccgtcttcatggccgtggagcactatggcatg
agccccgccttcgaagccatgctccagattggcaacatcgtgtttaccgtgttttttact
gctgaaatggtcttcaaaatcatagccttggacccctactattacttccagaagaagtgg
aacatatttgactgcatcattgtcaccgtgagcctgatagagctgggcgcagcccggaag
gggagcctgacggtgctgcggaccttccgcctgctgcgggtcttcaagctggccaagtcc
tggcccaccttaaacacgctcatcaaaatcatcggcaactcggtcggggccctggggaac
ctcaccatcatcctggccatcattgtcttcgtctttgctctggtgggcaagcagctcctg
ggggaaaactactgccacaagcgggaaaaaatttcagcccccaacgaagactggccccgc
tggcacatgcatgacttcttccactccttcctcattgtcttccggatcctctgtggagag
tggattgagaacatgtgggcctgcatggaagttggccagaagtctatctgcctcatcctt
ttcttgacagtgatggtgctgggcaacctggtggtgcttaacctgttcatcgccctgctg
ctgaactccttcagtgccgacaacctcacaccacccgaggatgacggcgaggtgaacaac
ctgcaggtggccttagcgaggatccaggtgttcggccagcacactaagagggccctttgc
agtttcctcagtcggccctgcttactcccccagcccaaggcagagccccagttggtggtg
aaactcccactttccacctccatagccaagaaccacattgctgctgacacagccctgggg
agccccggacggctcccggcactcagaagccccagggacaatcacagtgacttcatcacc
gatcctaacatatgggtctctgtgcccattgctgagggcgaatccgacctggatgacttg
gaggagaatggtgaggaggatgctcagagcaccaggcaggaagtgatcccccaaaggcag
gagcagctgcagcaagttgggaagtatgaggatcacctgccacccaggagcccagggtct
ggaatatcctctgaagacctgactccatacctaggtgagaagtggaaagacgaggctcct
gctcagggccctgcagagggagcggacgacacaagctcctcggaaggcagcactgtggac
tgcctggaccccgaggagatcctgaggaagatccctgagctggcagacgacctcgatgag
ccagatgactgcttcacggaaggctgtgttcaccactgtccctgttgcagagtgaacagc
tccaggtttccctgggccacaggctggcaggtacgcaaggcctgctttcgcatcgtggag
cacagctggtttgaaagtttcattgtcttcatgatcctgctcagcagtggagcgctggcc
tttgaagatttttaccttgaccggaagcccacggtgaaggccttgctggagtacactgac
agggtgttcacgtttatctttgtgtttgagatgctgctcaaatgggtggcctacggcttt
aagaattacttcaccaatgcctggtgctggctggacttcctgatcgtgaacatctcactg
acaagcctcatagcgaaggcgctgcagtattctgatatggcgcccatcaaagcccttcgg
accctccgcgccctgcggccactgcgggctctgtctcgatttgaaggcatgcgggtggtg
gtagacgccctggtgggcgccatcccatccatcatgaacgtcctcctcgtctgcctcatc
ttctggctcatcttcagcatcatgggcgtgaacctcttcgcggggaagtttcagaaatgc
atcaacaagaccaatgaaggctttcttcttgtgccttggtctactgtgaataacatgtct
gactgtgagcgtcaaaaccacactggaagcttattttgggtcaatgtgaaggtcaacttt
gataatgttgcaatgggctacctcgcgcttctgcaggtggcaacctttaaaggctggatg
gacatcatgtatgcggctgtcgattcccgggatgtgaactttcagcccaagtgggaggac
aacgtgtacatgtacttttactttgtcatcttcatcatttttggaggcttcttcacgctc
aatctctttgttggcgtcatcattgacaacttcaaccaacagaaaaaaaagttaggaggc
caggacatcttcatgacagaggagcagaagaagtactacaatgccatgaagaagctgggc
tccaagaagccccagaagcccatcccacggcccctgaataagtaccagggtttcgtcttt
gacatcgtgaccaggcagacttttgacatcgttatcatggtcctcatctgcctcaacatg
atcaccatgatggtggagactgatgaacagagtgaaaaaaagacaaaagtcctgaacaaa
atcaaccagttctttgtggctgtcttcacgggagagtgtgtcatgaagatgtttgccttg
aggcattactacttcaccaacggctggaatgtgttcgacttcgtcgtcgtggtcctctcc
attgggagcctggtgttctctgcaattgttacgtcacttggaagtctcttctccccgacg
ctcttccgcgtcatccgcctggcccgcattggccgcatcctcaggctgatccgcggggcc
aagggcatccgcacgctgctctttgccctcatgatgtccctgcccgccctcttcaacatc
gggctgctgctcttcctcgtcatgttcatctactccatcttcggcatggccagcttcgcc
accgtcaagtgggaggccggcatcgacgacatgttcaacttccagacctttgccaacagc
atgctgtgcctcttccagatcaccacgtcagcaggctgggacgggctcctcagccccatc
ctcaacacggggcccccctactgcgaccccaacttgaccatcaacaacagcacaagaggg
gactgcgggagtcccatcgtgggcatcatcttcttcaccacctacatcatcatctccttc
ctcatcgtggtcaacatgtacatcgcagtgattctggagaacttcaatgtggccacggag
gagagcacagagcccctgagtgaggacgactttgacatgttctacgagacgtgggagaag
tttgacccagaggccactcagttcatcaccttctctgccctctcagactttgcagacacc
ctgtctggccccctgagaatccccaaacccaatcggaatgtattaatccagatggacctg
cccttggtccctggagataagatccactgtttggacatcctgtttgccttcaccaagaat
gtccttggagaatccggggagctggattccctgaaggcaaatatggaggagaaatttatg
gcaactaatctttcaaaagcatcctatgaaccaatagcaaccaccctccgatggaagcaa
gaagacatctcagccactgtcatccaaaaggcctatcggagctacatgcggcaccgctcc
aggacgatcgccagccctgcgggggtgcccagggctgaggagggggcagcatcactcccc
gatgaaggctttgctgcgctcatagccaatgaaaactgtacgctcccagacaaatctgaa
acggcttccaccacatctttcccaccatcctacgacagcgtcactagaggccttagtgat
caagtcaacttgagcacatccagctcaatgcacaatgaaggggaggctgtcagtaaagaa
gctgctgggccctcatgtggaccctccagcaagggcacgtccagttctgatgtgtccgct
gctctgtga
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