Capra hircus (goat): 102176868
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Entry
102176868 CDS
T02910
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
chx
Capra hircus (goat)
Pathway
chx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102176868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chx03021
]
102176868
03036 Chromosome and associated proteins [BR:
chx03036
]
102176868
Transcription machinery [BR:
chx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102176868
Coactivators
SAGA/TFTC/STAGA complex
102176868
Chromosome and associated proteins [BR:
chx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
102176868
STAGA complex
102176868
TFTC complex
102176868
SAGA complex
102176868
SLIK complex
102176868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
TFIID_NTD2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
NBCH_WD40
Beta-prop_SPT8
RMC1_N
Beta-prop_HPS5
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_WDR19_1st
PEP5_VPS11_N
PROPPIN
Beta-prop_WDR75_2nd
eIF2A
vATP-synt_AC39
WDR54
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
102176868
NCBI-ProteinID:
XP_017899216
LinkDB
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Position
X
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AA seq
588 aa
AA seq
DB search
MEQFRAEEMQMAVSCYLKRRQYRGGDGPPRQGLRLSQSIQDMATSLAVQSESGCANTVSA
APCQADPQQYEVQFGRLRDFLMDSDSQHSDELMPLLYPLFVYLHLDLVQNSSKSTVESFY
SRFHGMFLQNASQKVVIEQLQTTQTIQDLLSNFQLRAFLDNKYVVRLPEDGYNYLLCYLQ
SDNNTALCRVLTWHIHLDVQPAERMDYQLYASGQGSSSRGQGSGLEPTDLPMYILQKEED
LDILQETIKRVQDGPPSLTTIYTYTFYNTEQLLNTAEASPDNKLLASGFNNSRIKLWSLT
SKFKSKPHQVDVSRIHLTYDTLEVDEEDRTAKEMKVLQGHCGPVYSTRFLPDSSALLSCS
EDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSLFFASASYDRTARLWSFDRTYPLRI
YAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSLRLFTGHCGPVRCLAFSPNGQ
YLVSAGEDQLLKLWDLASGTLYKELQGHMDDITSVTFSLDSSLIASASMDNSVRIWDIKS
KHNSMPTDGSSSELLGVYTSQMSNVLNVQFMAGNRLLVTGIREENQEH
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtttcgcgccgaggagatgcagatggccgtgtcctgctacctcaaacgccgg
cagtaccggggcggggacggcccaccgaggcaaggcctgcgactgtcacagagcatccag
gatatggctaccagcctcgcagtccagtcagaatctggttgtgccaacacagtgtctgca
gccccttgccaggcagacccccagcaatatgaagtacagttcggacggctgcgggatttt
ctcatggactctgactcccagcatagcgacgaactgatgcctctcctctaccctctcttt
gtctacctccatctcgacctggtccagaacagttcaaagagcacagtggaaagcttttac
agccgcttccatggaatgtttctccagaatgccagccagaaggtcgtcattgagcagctc
cagaccacccagaccatccaagacctcctgtctaacttccagctgcgggccttcctggac
aacaagtacgtggttcgtctgccagaagacggctacaactaccttctctgctacctccag
agtgacaacaacaccgcgctgtgcagagtcctcacctggcacatccacctggacgtgcag
cccgccgagaggatggactaccagctctatgccagcggccagggcagctcctccagaggc
cagggcagtggcctggagcccaccgacctgcccatgtacatcctgcagaaagaggaggat
ctggacatccttcaggagaccatcaagcgcgtccaggatggccccccctccctcaccacc
atctacacctacaccttctacaacactgagcagctgctgaacacggcggaggcctccccc
gacaacaagctgctcgcctcgggctttaacaactcccgtataaaactgtggagtctgact
tccaagtttaaatccaagccccatcaagtagacgtgtcccgcattcacttgacttatgat
acactggaggtcgacgaggaggacaggacagccaaggagatgaaggttctgcaaggacac
tgtgggccggtgtacagcaccaggttcctcccggacagctcggcgctgctctcctgctct
gaagacacgtccatcaggtactgggacctggagagcttcactaacactgtgctgtaccag
ggccatgcctaccccgtgtgggacctggacatcagcccgcacagcctgttctttgccagt
gcgtcctacgaccgcacagcgcggctgtggtcgtttgatcggacttacccactgcgaatc
tacgccgggcacctggcggatgtggactgtgtcaagttccaccccaattcaaactattta
gccacgggctcgacagacaagacggtgcggctgtggagtgcccagcaggggaactcgctg
agactcttcacaggccactgtggccccgtgcgctgtctggccttttcccccaacggtcag
tacctggtgtcggcaggcgaggaccagctgctgaagctgtgggacctggcatctgggacc
ctctacaaagagctacagggccacatggatgacatcaccagcgtcaccttcagcctggac
agcagcctgattgcatcagcatccatggataactccgtgcgtatctgggacatcaagagc
aagcacaacagcatgcccaccgatggctcgtccagtgagctcctgggcgtctacaccagc
cagatgagcaatgtgctgaatgtgcagttcatggccggcaaccgcctgctggtgaccgga
atcagagaagaaaatcaggaacactga
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