Capra hircus (goat): 102177569
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Entry
102177569 CDS
T02910
Symbol
CNOT10
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
chx
Capra hircus (goat)
Pathway
chx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102177569 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102177569 (CNOT10)
Messenger RNA biogenesis [BR:
chx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102177569 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
ARM_TT21_N
TPR_12
TPR_19
ARM_TT21
TPR_8
TPR_MalT
TPR_17
DUF6058
EMP24_GP25L
TPR_7
DUF948
Motif
Other DBs
NCBI-GeneID:
102177569
NCBI-ProteinID:
XP_005695577
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All DBs
Position
22:7009663..7066752
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AA seq
743 aa
AA seq
DB search
MAADKPADQGAEKHEGTGPSSGITDEEKELSASAFQAFAAGNYDVCLQHLASLQDINKDD
YKIILNTAVAEFFKSNQTTTDSLRQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVIL
YHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTYQAEKALHLLAVLEKMIS
QGNNNKNGKNETGNNTNKDGSNHKAESGALIEAAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNXSNIAEHPGFMKTGECLRCMFWNNLG
CIHFAMSKHNLGIFYFKKALQENDNVCAQLSAGSTDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHANPRLWLRLAECCIAANKGTSEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSIQNTVYNDGQSSAIPVASMEFAAICLRNALLLLPEDQQDPK
QENGSKSSNQLGGNAESSESGDACSSKSHDGDKCIPAPPSSPLRKQELENLKCSILACSA
YVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEAMESSGKRAPQCYPSSVNSARTVMLFNLGSAYCLRSEYD
KARKCLHQAASMIHPKEVPPEAILLAVYLELQNGNTQLALQIIKRNQLLPAVKTLSEMRK
KPVFQPVHPIQPIQMPAFTVQRK
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacaagcctgcagatcagggagcagagaagcatgaagggacaggtccgtcc
tctgggatcactgatgaagagaaggagttgtccgccagtgctttccaagctttcgcagct
ggaaattacgatgtctgtctgcaacatcttgcctctctacaagatataaacaaagatgat
tataaaataattttgaatacagcagtagctgagttttttaaaagtaaccagacaacaaca
gatagtttgagacaaacacttaaccagctgaagaatcaggtacactcggctgttgaagaa
atggatgggttggatgatgttgaaaacagcatgttgtattacaatcaagcagtcatccta
tatcacctgcggcagtatacagaggccatatccgttggcgaaaaactttatcagttcata
gaacctttcgaagaaaaatttgcccaagcagtgtgttttttgctcgtagacctgtatata
ttaacctaccaagctgagaaagctttacatcttcttgctgttctagaaaaaatgatttca
caaggaaacaataacaaaaatggaaagaatgagactggtaataataccaacaaagatgga
tctaatcataaagctgaaagtggagcgctaatagaagctgcaaagtcaaagatacatcag
tataaagtaagagcgtatatccaaatgaagtccctaaaggcatgcaaaagggaaatcaag
tccgtcatgaatacagcggggaattctgcaccttccctgtttcttaaaagcaattttgag
tacttaagaggcaattatcgaaaagctgtgaaactgctgaatnagtcaaacattgctgag
catccaggattcatgaaaacaggtgaatgcttgcggtgcatgttctggaataatcttggt
tgtatccattttgccatgagcaagcacaatttgggaattttctactttaaaaaggctcta
caggagaatgacaacgtctgtgctcagctcagcgcaggcagcaccgatccaggcaaaaaa
ttttcaggaagacctatgtgtacattactaaccaacaagaggtatgagttgctgtataac
tgtgggattcagctgcttcacattggaaggccgctcgctgcatttgagtgtctgattgaa
gcggttcaggtttatcacgcaaacccccggctctggctgcggctggccgaatgctgcatt
gctgccaataagggaacttctgagcaagaaacaaaaggtcttccaagtaaaaaaggaatt
gtacagtcgattgttggtcaaggctatcatcgtaaaatagttctggcatcacagtcgatc
cagaataccgtttataatgatggacagtcttcagccattcctgtagccagtatggagttt
gcagccatttgtctccgaaatgccctgctgctgctacctgaagaccagcaagatccgaag
caggagaatggatctaaaagcagtaaccagttaggtggcaacgcggagagcagtgagagc
ggcgatgcttgcagcagtaaaagccatgatggagacaaatgcattccagctccaccttct
tctccactgagaaagcaggagttagagaacttaaaatgctccatactggcctgcagcgcc
tacgtggctctcgctttgggtgataaccttatggctctgaatcacgcagacaaacttctt
cagcagcccaagctgtcaggatctctgaagttcctgggtcatttatatgctgcagaagcc
ctcatctctctggacagaatctctgatgctattactcacttgaacccggagaatgtcact
gatgtctccttagggatctcttcaaacgagcaggaccaaggatcagacaaaggtgaaaat
gaagcaatggaatcctctgggaagcgggcccctcagtgctaccccagttccgtcaactcg
gcccggactgtgatgctgttcaacctgggcagcgcctactgcctgaggagcgagtatgac
aaagcccgcaagtgtctccaccaggcggcctcaatgatccatcccaaagaggtgccccct
gaagccatcctgctggccgtctaccttgagctacagaatggtaatacccagctggcctta
cagatcatcaaaaggaatcagctgctccctgcagtgaaaacactctctgaaatgagaaag
aagccagtgttccagcccgtccacccaatccagcccatccaaatgccagcgttcactgtg
cagagaaagtga
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