Capra hircus (goat): 102178359
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Entry
102178359 CDS
T02910
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
chx
Capra hircus (goat)
Pathway
chx03015
mRNA surveillance pathway
chx05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102178359 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
102178359 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102178359 (HBS1L)
Messenger RNA biogenesis [BR:
chx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102178359 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
102178359
NCBI-ProteinID:
XP_005684846
UniProt:
A0A452E3M4
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Position
9:complement(60101248..60188603)
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AA seq
686 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPLAVEPVEEYDYE
DLKEFSSSLVNHQLSGIDQARLYSCLDHMREVLGDAVPDDILIEAVLKNKFDVQKALSVV
LEQDKVQNLKVRSEGAISTGKTAKGKSIDSQSSQSESEIVPKVTKMTVSGKKQTMGFEVP
RVTAEENGQSFHTPQKGHSNEDTNLVSSDVLESASKSALPSHTIQASEEQSSTPTPVKKS
SKLRQQIDIKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGDVNKRTMHKYEQE
SKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITG
AAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLVVAVNKMDQVNWQQERF
QEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSSELTGWYKGLCLLEQIDSFK
PPQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHD
EPVDWAAAGDHVSLTLVGMDIIKINVGCIFCVPKEPIKVCTRFRARILIFNIEIPITKGF
PVLLHYQTVTEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKD
FKELGRFMLRYSGSTIAAGVVTEIKD
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcatcggaatgtccgaggctataactacgatgaagattttgaagatgatgac
ctctatggccagtctgtagaggatgattattgtatttcgccatcaacagctgctcagttt
atttactcacgacgtgacaaacctttagctgttgaacccgtagaagaatatgattatgaa
gatttgaaagaattctccagttctcttgtgaatcatcagctaagtggaattgatcaagct
cgtctttattcatgccttgatcacatgagagaggtacttggagatgctgtgccagatgac
atattgattgaagcagttctgaagaacaagtttgatgtgcagaaggctttgtcagtggtt
ctggagcaggataaagtgcagaatttgaaagtcaggagtgagggagcaatatctacagga
aagacagcaaaaggaaaatcaatagattcccagtcatctcaaagtgaatctgaaattgtg
ccaaaagttactaagatgactgtatctggaaagaagcaaactatgggatttgaagtgccc
agagtaactgctgaagaaaatggtcagagtttccacacacctcaaaaaggacattctaat
gaagataccaaccttgtttcttctgatgtacttgagagcgcttctaaatcagctcttcca
tcccacaccattcaagcatcagaagagcagagttcaacaccaacaccagtgaaaaagtct
agcaagctgaggcaacaaatagatatcaaagcggaactggagaagcggcaaggaggaaag
cagctcctcaacctagtggtcattggtcatgttgatgctggaaaaagtactctgatggga
catttgctttatcttctgggtgacgtaaacaaaagaactatgcataagtatgaacaagag
tctaaaaaggctggcaaagcttcgtttgcatatgcatgggtcttggatgagactggcgaa
gaaagggaaaggggggtaacaatggatgttggtatgacaaagtttgagaccaaaaccaaa
gttattacattaatggatgctccaggccataaggatttcattccaaatatgattacagga
gcagcccaggcagatgtagctgttttagttgtagatgccagcaggggagagtttgaagct
ggatttgagactgggggacaaacacgagagcatggactcttggttcgttctcttggagtg
acacaactcgtagttgcagtcaataaaatggatcaggttaattggcaacaagaaaggttt
caagagattactggaaaacttgggcactttcttaagcaagcaggttttaaggaaagtgat
gtagcttttatccctacaagtggtctcagtggtgaaaatctaatcacaagatctcagtca
agtgaacttacaggatggtataaaggactatgtttattagaacaaattgattccttcaag
cctcctcaaagatctatagataagccttttagattatgtgtatctgatgttttcaaagat
caaggatctggattttgtgtaactggtaaaattgaagctggttatatccaaactggtgac
cgactactagcaatgcctcctaatgaaacttgtactgcaaaaggaatcactctgcacgat
gaacctgttgactgggcggcagcaggggatcatgttagtcttacgttggttggaatggac
atcatcaaaatcaatgttggctgcatattttgtgtccccaaagaacccattaaagtgtgc
actcgtttcagagcccgaatcctcatctttaatattgaaattcctatcactaaaggattt
cccgtgctgttacactaccagaccgtcactgaacccgctgttattaaaagattgattagt
gtcttaaacaaaagcactggtgaagtcacaaagaaaaagcctaaattattgaccaaaggc
cagaatgcattagtggagctacagacacaaagaccagtggctcttgagctgtacaaagac
tttaaagagctggggagatttatgctgcgctacagtggttctaccatagctgctggtgta
gtgactgagataaaagattga
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