KEGG   Capra hircus (goat): 102178401
Entry
102178401         CDS       T02910                                 
Symbol
COL6A6
Name
(RefSeq) collagen alpha-6(VI) chain
  KO
K06238  collagen type VI alpha
Organism
chx  Capra hircus (goat)
Pathway
chx04151  PI3K-Akt signaling pathway
chx04510  Focal adhesion
chx04512  ECM-receptor interaction
chx04820  Cytoskeleton in muscle cells
chx04974  Protein digestion and absorption
chx05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:chx00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    102178401 (COL6A6)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102178401 (COL6A6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102178401 (COL6A6)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102178401 (COL6A6)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    102178401 (COL6A6)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    102178401 (COL6A6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:chx04147]
    102178401 (COL6A6)
   00536 Glycosaminoglycan binding proteins [BR:chx00536]
    102178401 (COL6A6)
Exosome [BR:chx04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   102178401 (COL6A6)
Glycosaminoglycan binding proteins [BR:chx00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102178401 (COL6A6)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   102178401 (COL6A6)
SSDB
Motif
Pfam: VWA VWA_2 Collagen VWA_3 vWA_SIBA-E Radical_SAM Integrin_beta
Other DBs
NCBI-GeneID: 102178401
NCBI-ProteinID: XP_005675766
LinkDB
Position
1:complement(151475673..151649851)
AA seq 2269 aa
MKMLLILFLIIICSHVSVNQHSGPEYADVVFLVDSSDHLGIKSFPFVKAFINKMISSLPI
EADKYHVGLAQYSDGLHREFQLSTFKSRGPMLNHLKKNFGFLGGSLRIGKALQEVHRAYF
SSGRDRKQFPPILVVLASAESEDAVEEAAAALRKDGVRIVSVGMQGASEKTLKAMATGQF
HYSLRTVRDLSTFSQNMTQILKAAAQYKDGAVNDVLVEVCQGPSVADVVFLLDMSTNSSW
EDFDYLKEFLEESISALDIKEHCMRVGLVAYSNETKVVSTLSGGVNKSEVLQNIQSLAPL
AGKAYTGAALKKIRKEVFSAQHGSRKNQGVPQIAVLVTHSPSQDNVTKAAVNLRRQGVTV
FTIGVEGANNTQLEKIASHPAEQYVSQLKSFSDLAAHNQTFLKKLRNQITHTVSVISERT
ETLKAGCVDTEEADIYLLIDGSGSTQATDFQEMKTFLSEVAGMFNIAPQKVRVGAVQFAD
RWDLEFEISKYTNKHDVGKAIENIRQMGGNRNTGAALNFTLGLLQKAKQQRGGRVPSHLV
VLTSGASRDSVLGPANRLREELVHVYAIGVREANQTQLREIAGEEKRVYYVHDFDALKDI
RNQVVQEICAEEACKEMKADIMFLVDSSGSIGLENFIKMKTFMKNLVSKSQIRADRVQIG
VVQFSDVNKEEFQLNRYTSQGEISDAIDRMAHIGETTLTGSALTFVSQYFSPAKGARPNV
RKFLILITDGEAQDIVKDPAVALREEGIIIYSVGVFGSNVTQLEEISGRPEMVFYVENFD
ILQHIEDDLVFGICSPREECKRIEVLDVVFVIDSSGSIDHDEYNIMKDFMIDLVKKADVG
KNHVRFGALKYADDPEVLFYLDNLDTKWEVISVLQNDQPMGGNTYTAEALGFSDHMFTEA
RGSRLHKGVPQVLIVITDGESHDADKLNATAKALRDKGILVLAVGIAGANPVELLAMAGS
SDKYFFVETFGGLKGIFSDVSASVCNTSKVDCEIEKVDLVFLMDGSNSIHPDDFRKMKEF
LASVIQDFDISNNRVRIGAAQFSHTYRPEFPLGMFISKKEISFQIENIKQIFGYTHIGAA
LRQVGHYFRPDMGSRIHTGTPQVLLVLTDGQSQDEVAQAAEELRHKGVDIYSVGIGDVDD
QQLVQITGTADKKLTVHNFDELKKVKKRIVRNICTSGGDSNCFVDVVVGFDISTQQNGQA
LLEGQSWMETYLQDILRVISSLNGVSCEVGTEAQVSVAFQVTNAAEKYSPKFEIYSENIL
NSLKDLTVKGPSLLNTNHLSSLWDAFQNKSAARGKVALLFSDGLDDDIEKLEQKSDELRK
EGLNALITIALDGPTSSGDLADLLYIEFGRGFEYRTQLTLGMRDLGSQLSKHLVNVAERT
CCCLFCKCIGGDGTRGDPGPAGKTGLPGFKGSEGYLGEEGTAGERGAGGPVGEQGTKGCY
GVKGPKGTRGLNGQEGEVGESGIDGLNGEQGDSGLPGAKGEKGNEGAQGIPGERGISGDH
GAKGLRGDPGVPGFDNSIEGPKGLKGEPGRQGRRGWPGPPGTPGSRRKTAAHGQRGHTGP
QGKPGIPGPDGLAGSLGLKGPQGPRGEAGMKGEKGSLGSKGPQGLPGPAGEAGSQGRLGS
QGNKGEPGDLGIKGAVGLRGPRGLLGDDGNPGYGSVGSKGAKGQEGFPGEIGPKGEVGDP
GGPGQTGPKGARGKTVSAGLPGEPGSPGELGPPGRKGVKGAKGLASFSTCELIQYVRDHS
PGRQGAPQCPVYPTELVFALDQSRSVTEPEFVRMKAMLSSLLSGLRVREDHCPAGARVAV
LAYDSHARLLIRFSDTYRKDRLLREIEALPYERSTASRDIGKAMRFVSRHVFKRMLPGSH
ARRISTFFSGGPSVDPQTITTAGLEFSALDIIPVVIAFNQVPAVRRSFAIDDTGRFQVII
IPSGADSAPALEELQRCTFCYDVCKPDASCDQARPPPVQSYVDAAFLLDSSRHVGSAEFE
DIRRFLGALLDHFEVTPEPETSVTGDRVALLSLSPPHFLPNTQRSPVRSEFNLTTYRSKR
LMKRHVDESVQQLNGDAFIGHALQWALDNVFSRTPNLRRNKVIFVISAGETSHLDRETLK
KESLRAKCQGYTLFVFSLGPSWNDQELEDLASYPLDHHLVQLGRIHKPDHRYGVKFVKAF
ISSVRRAINKYPPINIKAKCNRLSSMEPQQPPLQFVRSFVPGPHRATLKEDALQKAKFFQ
YKNYFSRAARGGRDGAVQNFTRNIFRAFGNGKRVMRAAPKHDKGSAQGV
NT seq 6810 nt   +upstreamnt  +downstreamnt
atgaaaatgctgcttattttgttccttataataatttgttcccatgtttctgtcaaccaa
cattctggccctgagtatgctgatgtggtgtttctggtggacagctccgaccacctggga
attaagtccttcccctttgtgaaggcctttatcaacaagatgatcagcagcctccccata
gaggctgacaagtaccacgtgggcctggcccagtacagcgatgggctccacagagagttc
cagctcagcaccttcaagagcaggggccccatgctgaaccacctcaagaagaacttcggg
ttcctggggggctccctgcggattgggaaggctctccaggaggtgcacagggcctacttc
tcaagtggcagggacaggaaacagtttcccccgatcctggtggtcctggcttctgccgag
tccgaagatgctgtggaagaggccgccgcagcgctccgcaaagatggggtgaggatcgtc
tcggtggggatgcagggggcatccgagaagaccctgaaggccatggccacgggccagttc
cactacagcctccggacggtcagggacctcagcacgttctcccaaaacatgacgcagatt
ctcaaggctgcagctcagtacaaggacggggcagtcaatgacgtccttgtggaagtttgc
caaggcccttccgtggctgacgttgtgttcctgctggatatgtccaccaacagcagctgg
gaggactttgactatcttaaagaattcctggaagaaagcatatctgctctggacatcaaa
gagcattgcatgagggttggcctcgtggcctatagcaatgagacgaaggtggttagcacg
ctgagcgggggcgtaaacaagtcggaggttctgcagaacatccagagccttgctcccctg
gccgggaaggcctacactggagccgccttgaagaagatcaggaaagaagtcttcagtgca
cagcacggcagtcggaagaaccagggggtgccgcagatcgccgtgctcgtgacccacagc
ccgtcccaggacaacgtgaccaaggccgctgtgaacctccggcgccagggggtgactgtc
ttcaccattggcgtagagggggccaacaacacccagctggagaagatcgcgtctcaccct
gctgagcagtacgtgtcccagctgaagtccttctctgacctggctgcccacaaccagacg
tttctgaagaagctgcggaatcagatcacacacacggtctctgtcatttccgagaggacc
gaaaccctcaaagccggttgtgtggacacggaggaagcagacatctacctgctcatcgat
ggctccgggagcacccaggccacagacttccaggagatgaagacgttcctgtcagaggtc
gcagggatgttcaacatcgctccccagaaggtgcgggttggggctgtccagttcgccgac
cgctgggacttggaatttgagatcagtaaatacacgaacaagcacgacgtgggaaaggcc
atcgagaacatcaggcagatgggcgggaacaggaacacgggcgccgccttgaacttcacc
ctggggctgctgcagaaggcaaagcagcagcggggaggcagggtgccctcccacctcgtt
gtgctgaccagcggtgcgtcccgggacagcgtcttggggcctgcaaacagactgagagag
gagctcgtccacgtctacgccatcggggtcagggaggctaaccagactcagctgcgtgaa
atcgccggcgaagagaagcgggtctactacgtgcatgactttgatgccttgaaagacata
agaaaccaggttgttcaagaaatctgtgctgaagaagcctgcaaagagatgaaggccgac
atcatgttcctggtggacagttctggcagtataggactagagaacttcatcaaaatgaaa
acatttatgaaaaacctggtgagcaaatctcagatcagggcagatcgagtgcaaatcggt
gtggtccagttcagcgacgtcaataaggaagagtttcagctcaacagatacacatcccag
ggggagatttcagatgcaatagaccgaatggctcacattggagaaaccaccttgacgggt
agcgccctgacgtttgtatctcagtacttcagccctgccaagggagcccggcccaacgtc
aggaaattcctcatcctcatcacggatggcgaggctcaggacatagtcaaggacccagcg
gtggcacttcgggaagaaggcatcatcatctactctgtaggggtgtttggctccaacgtc
acccagctggaggagatcagcgggaggccagagatggttttttatgttgagaattttgac
attctgcagcacattgaggatgaccttgtttttggaatatgcagcccccgtgaagaatgc
aagcgcattgaagttttagacgtcgtgtttgtaattgacagctctggcagcattgaccac
gatgaatacaacatcatgaaggactttatgatcgacttggtgaaaaaggctgatgtgggc
aagaatcacgtccggtttggggctctgaagtacgcggatgacccggaggtgctattttat
ctggataaccttgacaccaaatgggaggtgatctcggtgctccagaatgaccagcccatg
gggggcaacacttacaccgctgaggccctgggcttctcagaccacatgttcaccgaagcc
cggggcagccgtctgcacaaaggggtcccccaggtcctcatcgtgatcaccgatggggaa
tcccacgatgccgataagctcaatgctacagccaaggccttgagggacaagggcatcctt
gtcctggccgtgggcatcgctggtgccaaccctgtggagctgctggccatggcaggatca
agtgacaagtacttcttcgtggaaacttttggaggtctgaaggggatattttcagatgtg
tctgccagcgtatgtaacacttcaaaagtagactgtgaaattgaaaaagtcgatcttgtg
ttcctcatggatggttcaaacagcattcatccggatgactttaggaagatgaaggaattc
ttggcatctgtcattcaagactttgatatcagtaacaacagagtgcgtataggagctgcc
cagttcagccacacttaccggccagagttccccctgggaatgttcatcagcaaaaaggag
atctcatttcagattgaaaacatcaagcagatctttggatacacccacattggcgctgcc
ctgcggcaggtggggcactacttccggccggacatgggcagccggatccacacaggtacc
ccccaggtgctgctggtcctcacggatggccagtcccaagacgaggtggctcaggccgcc
gaagagctgagacacaaaggcgtcgacatttactctgtgggcatcggggatgtggatgac
cagcagctcgttcagatcaccgggaccgccgataagaagctgacagttcacaactttgac
gaactgaagaaggtcaagaagaggattgtccgtaacatctgtacctccgggggtgacagc
aattgctttgtggatgttgtggtgggatttgacatctcaactcagcagaatgggcaggct
ttgctcgaaggccagtcctggatggaaacctatcttcaagacatcttacgtgtcatcagc
tccctcaatggggtaagctgtgaggtgggcacggaggctcaggttagtgtggcttttcaa
gtgaccaatgctgcagaaaaatattcccccaagtttgagatctacagtgaaaatatcctg
aacagcttgaaggatttaacagttaaaggaccatctcttctcaacacaaaccacttgagt
tctctgtgggatgcttttcagaataagtcagctgctcggggaaaggtggccctcttattt
tcagatggattggatgatgatattgaaaagcttgaacaaaaatctgatgaacttagaaaa
gaaggcctgaatgccctcatcactattgctctggacggacccaccagttccggcgacctg
gctgatcttctgtacattgaatttgggagaggatttgagtaccgaacacagctcactctt
gggatgagggatcttgggagtcaattgtcaaagcacctggtcaatgttgcggagaggacg
tgctgctgtctattctgcaagtgcatcggaggagatggcacaaggggagaccctggacca
gcagggaaaacgggacttccaggttttaaaggcagtgaaggctacctgggagaggagggc
accgctggagaaagaggagctggtggacctgtgggggaacaaggcactaaaggatgctat
ggtgtcaaaggccctaagggaaccaggggactaaatggacaagagggagaagttggggaa
agtggaattgatggcttaaatggagaacagggtgacagtggtcttcctggagcaaaagga
gagaaaggcaatgaaggagcccaggggataccgggagagagaggaatttctggagaccat
ggagcaaagggcttgcgtggagacccaggagttcctggatttgacaatagcatagaggga
cccaagggcttgaaaggagaacctggaagacagggaagaagaggctggccagggccccct
ggaactcccggctccagaaggaagacagcagctcatggccagaggggacatacaggccca
caggggaaaccaggcatcccaggtccagatggacttgcagggtcactggggcttaagggc
cctcagggcccaagaggagaagctggaatgaaaggagaaaaagggagtctgggaagtaaa
ggtccccaggggcttccaggaccagcaggagaggcagggagtcaaggccgtttgggaagc
caaggaaataaaggagaacctggcgatctggggataaagggagccgttggccttcggggt
cctcggggcttgctgggtgatgatggcaacccaggttacgggagtgttggaagtaaagga
gcaaaggggcaagaaggattccctggagaaatcggacctaagggtgaggtcggagaccct
ggtggcccaggacaaactggacccaagggcgctagaggcaagacggtatctgctgggctt
cccggagaaccaggatcccctggggagctgggacctcctggacgcaagggtgtgaaaggg
gccaagggattggcttcattctctacatgtgagctcatccagtacgtgcgggaccatagt
cctggcagacagggagcgcctcagtgccccgtgtaccccacggagctggtgttcgcgctg
gaccagtcccggagtgtcacagagcccgagtttgtgcggatgaaggcgatgctgtcctcc
ctgctgagcggcctgcgggtccgggaggaccactgccccgcaggggcgcgcgtggccgtg
ctggcatacgactcccacgctaggctcctcatccgcttctccgacacctacaggaaggac
cgactcctcagagagatcgaggccctcccttacgagcgctccacggccagcagggacatc
ggcaaggccatgaggtttgtctccaggcacgtcttcaagcggatgctcccagggtctcac
gccaggagaatctccaccttcttcagtggaggcccgtccgtggacccccagaccatcacc
actgctggcctggagttcagtgccctggacatcatcccggtggtgatcgccttcaatcag
gtgcctgctgtccggcgatcgtttgcgattgacgacacaggcagattccaagtcatcatt
atcccatccggagctgactctgcaccagcactcgaggaactccagcggtgtactttctgc
tacgatgtatgcaagccggacgcttcttgcgatcaagccagaccaccccctgtgcagtct
tacgtggacgctgctttccttctggacagctcccggcatgtgggaagcgcggaatttgaa
gacattcgaagattcttgggagcactgctagatcacttcgaagtcaccccagagcctgag
acctctgtcaccggagaccgggtggccctgttaagcctcagtccccctcacttcctaccc
aacactcagaggagccctgttagaagtgaattcaacctgaccacctacaggagtaaacgc
ctcatgaagagacacgtggacgaatccgttcagcagctaaatggagatgcttttattggt
catgccctacagtgggctctggacaatgtcttctcaaggacacccaatctgagaagaaat
aaagtcatttttgtgatatctgctggggaaaccagtcacttggacagggaaaccttaaag
aaagaatccttgagggccaagtgtcaaggttataccctgttcgtgttttccctggggcct
tcttggaatgaccaggaactggaagatctagccagctaccctttggatcaccacttggtc
cagcttggccgcattcataaacctgaccacagatacggtgtgaagtttgtgaaggctttt
ataagctcagtcaggcgtgcaatcaacaaatatccaccaataaatatcaaagcaaagtgc
aacagactcagctctatggagccacagcagcccccactccagtttgtgcgaagctttgtt
cctgggccacacagagctaccctcaaagaagatgcactgcagaaggcaaagttcttccaa
tacaaaaattacttctcaagagcagcaagaggcggccgagatggtgctgttcaaaatttc
accagaaacatattccgtgcctttggaaatgggaaaagggtgatgagagcagcccccaaa
cacgataaaggaagcgctcagggagtgtaa

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