Capra hircus (goat): 102178525
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Entry
102178525 CDS
T02910
Symbol
SH3TC1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chx04131
]
102178525 (SH3TC1)
Membrane trafficking [BR:
chx04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
102178525 (SH3TC1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_8
TPR_12
TPR_2
SH3_1
TPR_NPHP3
SH3_2
TPR_1
DUF982
Motif
Other DBs
NCBI-GeneID:
102178525
NCBI-ProteinID:
XP_017905280
UniProt:
A0A452E0D9
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Position
6:114674262..114718075
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AA seq
1289 aa
AA seq
DB search
MEGPAEPAPRGKRPSGPSGSSGDCGVREEAKSMSVIWEQPQPEEAKATVRGDLTLQLLAV
RRKSGLPDPNLQQALRGRLRLLENESCEVARALGELSARLLSIHSDQDRMVVTFKTFEEI
WKFSTYHALGFTHHCLENLLMDQAFWLLEPDEDQETAIQVQVDADALRLAYESLLVQEGP
FFVLCPDHHVRVRNGPQPLRRPPRGPQADAATALDPSAPSPGTSSEEEGAAAATQEPLIP
FHQWALRVPKDSVNDPLGGPVVPDVQLMAIGQALAIADCQGSGPEEMTFRSGDHIEILGA
QVPGLPWCLGRHAASGQVGFVRTSLISVQGQASDLENVIFLSEEERSFFSREGHFSEEEA
RQLLRRTSSTDVCTVYSLDTSEEAETQQQQEEEEMSPPCLNPEPQEILQMVKNVLEQCKS
CQGCPKEPGSPGVHRASSGAGLPDTEEPSFCLDVGDDWADPEALGSQLLFLDAPGFQAGF
RGLYDLSPPALSGVFGGFNDEELVRRLAEVRGVAKKAGLPMALARLCFLLGRLCVRQLKL
SQARVYFEEALGVLGGRFGDLVLVAAVYTSLASVHLRQKSKEKCAQVVPKALALLLGTPS
HGDSSEADSSLLTLALRKAIGGRSPQAEARACFLLAKHHARLKQPEEALPFLERLLLLLP
GAAGTPGASWPMDCYLLLAGIYSQRCLPHLALSCIRVASLRAQGSLRSALRSAALVLQNS
PRLPVLPAQLAHYLRRALASPASGSGRALHGPVYASLAQLYSQHGWQGRAIAFMVQAVET
DAQLGGRTVVDRLVALAWLHVLHRQSPAALGILESLLEAAVATPDQEGLIANMTAIALKR
TGRTRRAAEGYYCALRVARRLGCPRNEAVVLANFGALCLQTGAGGLAQHYLLEAVKLFSR
LPGREGGPDFTRVLLRLGDLCTHRALARQARCYYEWAFLVAVEMDHWESQLLAVQRLCHF
YGAVVPNEARCVVYHEFQLSLARRANDKVLEGQLLEAISQLYLSLGTERAYRSALEYTKR
SLGVFIDLLKKDKEAHAWLQAGKIYYALRQSELVDLYIQAAQNAALCTGDPGLGLQLFEE
AGDIFFNGAWDREKAVSFYRDRALPLAVSTGSREAELRLCNKLSALLAEMETPQEGLEFA
HTALALSLTLGDQLNQRVACHRLAALHHRLGHSELAEHFYLKALSLCTSPLEFDEEPLYY
VKVYLALGDIIFYDLKDPLDAAGYYQLALAAAMDLGSKRAQMKLCTRLASVYHHSLLDRE
MSLFFYQKARAFATELSVRRGHLVPGPPS
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggagggcccagcggagccggctccgagggggaagaggccctcagggccctcggggagc
agtggcgactgcggggtccgagaagaggccaagagcatgtccgtcatctgggagcaacca
cagcccgaggaggccaaggccaccgtccgaggggacctgaccttgcagctgctggcggtg
cggcggaagagcgggctgcccgaccctaacctgcagcaggccctacggggccggctccgc
ctgctggagaatgagagctgcgaggtggcccgcgccctcggggagctgtcggccaggctg
ctgtccatccacagtgaccaggaccggatggtggtgacattcaagacgtttgaagaaatc
tggaagttttccacctaccacgctctcggcttcactcatcactgcctggagaacctgctc
atggaccaggccttctggctgctcgagcctgacgaggaccaggagacggccatccaggtc
caggtggatgcggatgccttgaggctggcgtacgagagcctcctcgtccaggaaggccct
ttcttcgtcctgtgtcctgaccaccacgtgagagtgaggaatggcccccagcccctcagg
cggcctccgaggggtcctcaggcagacgcggccactgcactggacccttcagccccgagt
cccggcacgtcctcagaggaggagggggcagcggcggccactcaggagcccttgattccg
ttccatcagtgggcgctcagggtccccaaggactccgtcaacgaccccctgggtggaccc
gtggtgccggacgtccagctgatggccataggccaggccttggccatagcggactgccag
ggctcagggcccgaagagatgaccttccgaagtggcgaccacattgagatcctgggcgct
caggtgcccggcctgccctggtgcctgggccggcacgcggcctctggccaggtcgggttt
gtgcggacgagcctcatcagtgtgcagggccaggcgtctgacttggaaaatgtgattttt
ctcagtgaagaagaaaggtctttctttagccgtgaaggacacttttctgaggaggaggcc
aggcagctgctgagaaggacgtccagcacggatgtctgcacggtgtacagcctggacacg
tcagaagaagctgagacacagcagcagcaggaggaagaagaaatgtccccgccttgcctg
aacccagagccacaggagatcctgcagatggtgaagaatgttctagaacaatgcaagtcc
tgtcagggctgccccaaggaaccagggtcccccggcgtccacagggcatccagtggtgca
ggcctgccggacaccgaggagccctccttctgcctggacgtaggagatgactgggctgac
ccggaggccctgggctcgcagctgctgttcctggacgcacccgggttccaggccggtttc
cggggcctgtacgacctctccccgcctgcgctgagcggcgtgttcggcggcttcaacgac
gaggagctggtcaggcggctggccgaggtccgcggggtggccaaaaaagccgggctgccc
atggccctggccaggctctgcttcctgctgggacggctgtgcgtgcggcagctgaagctg
tcccaggcccgcgtgtacttcgaggaagccctgggggtgctcgggggccgcttcggggac
ctggtcctggtggcggccgtgtacaccagcctggcctcggtccacctgcggcagaagagc
aaggagaagtgcgcacaggtggtgcccaaggccttggccctgctcctggggacgcccagc
cacggcgacagctccgaggccgactccagcctcctgaccctggccctgcggaaggccatc
ggcggccgcagccctcaggccgaggcccgggcctgcttcttgctggccaagcaccacgcc
cgcctcaagcagccggaggaggccctgcccttcctggagaggctgctactgctgctaccc
ggggcggcggggaccccgggcgcctcctggcccatggactgctacctgctgctggcgggc
atctacagccaaaggtgcctgccgcacctggcgctgagctgcatcagggtggcctcgctg
cgggcacagggctcgctgcgcagcgcactccggagcgcggccctggtcctgcagaacagc
ccgcggctccccgtcctgcctgcccagctggctcactacctccggcgggcgctggcctcc
ccggcctccggctccgggcgggccctgcatggccctgtctatgccagcttggcccagctg
tacagccagcacgggtggcagggcagggccatcgccttcatggtgcaggccgtggagaca
gacgcccagctgggtggccgcactgtcgtggaccgcctggtggccctggcctggctgcac
gtccttcacaggcagagcccagcagccctgggcatcctggagtccctcctggaggcggcg
gtggccaccccggaccaggagggcctgattgccaacatgacagccatcgccctgaagagg
actggcaggacccggcgggcagccgagggctactactgcgccctgagggtggcccggcgc
ctgggctgcccgcggaatgaggcggtggtcctggccaacttcggggccctgtgtctgcag
actggtgccggcgggctggcccagcactacctcctggaggccgtgaagctcttctcgcgg
ctgcctggcagggagggcggcccggacttcacccgggtgctgctacgcctgggggacctg
tgcacccacagggcgctcgcccggcaggccaggtgctactacgagtgggcctttctggtt
gccgtggagatggaccactgggagagccagctgctcgccgtccagcggctctgtcacttc
tacggcgcggtcgtgcccaacgaggcccggtgcgtcgtctaccacgagttccagctctcg
ctggcccgcagggcgaacgacaaggtgctggaggggcagctcctggaggccataagccag
ctctacctgtccctgggcaccgagcgggcctacaggtccgccctggagtacaccaagcgc
agcctgggggttttcatcgacctgctgaagaaggacaaggaggcgcacgcctggctgcag
gccgggaagatctactacgcgctgcggcagagcgagctggtggacctgtacatccaggct
gcgcagaacgccgccctgtgcacgggggaccccggcctggggctgcagctcttcgaagag
gccggagacatcttcttcaacggggcctgggatcgcgagaaagcagtgtccttctaccgg
gaccgggcactgcccctggcggtgtccacggggagccgggaggccgagctgcggctctgc
aacaagctgtcggcgctgctggctgagatggagacgccccaggagggcctggagttcgcc
cacacagccctggcactcagcctcaccctgggggaccagctgaaccagcgggtggcctgt
caccggctggccgccctgcaccaccggctgggccacagcgagctggcggagcacttctac
ctcaaggcgctatcgctttgcacctcgccgctggagttcgacgaggagcccctgtactac
gtgaaggtgtacctggcgcttggcgacatcatcttctacgacctcaaggacccgttggac
gcggccgggtactaccagctggcgctggcagcagccatggacctgggcagcaagcgggcc
cagatgaagctctgcacgcgcctggcctccgtctaccaccactccctcctcgaccgcgag
atgtccctcttcttctaccagaaggcgcgtgccttcgccaccgagctcagcgtccgccgg
ggccacctggtccccgggcccccgtcctga
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