Capra hircus (goat): 102178725
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Entry
102178725 CDS
T02910
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
chx03000
]
102178725 (SOX30)
Transcription factors [BR:
chx03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102178725 (SOX30)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
102178725
NCBI-ProteinID:
XP_017907206
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Position
7:41255163..41309606
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AA seq
771 aa
AA seq
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MEKAREVPPPRPPPTPRQLPRATPPRPLRPAPPSLPVEGASFRAAAAEPSPSPPTPCAAA
IATVASSCGEPSALSVQPAARRLLQVKPEQVLLLPPGPPLPQAREEGAATSPAQARLLQL
RPELLLLPPPPPASEGVPCRPELHPLQPRALHVKAEKQEPGPGLDLLAGPRRAVEACSKT
SRTVKAEGSGPLNSRRGDEKKGKLEAEEIVSYAAKGEEGKSLAALREGVIKTEAPERLRE
DCRLSTEPASNGLAHGSKDVILTQPSTAFGPHQQDLRIPLTLHTVPPGARIQFQGPPPSE
LIRLTKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMN
AFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFP
GWVYQPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTIYPYRSPTYSVVIPSLQNTITHPV
GESPPTIQLPTPAVQRPSPITLFQPSVSSTAQVPVQAPSLPLRPALPPQRFAGPSQTDTH
RLHSGVNRSVKRPTPVSLESTNRIPTSASPAHSRFSTSTIQPPKEYPSVSTCPRSTPISQ
APPIPHSHVYQPPPLGHPAALFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFP
SSMPECLGYYEDRYQKHEAMFSALNRDYPFRDYPDERAHNEDSRSCENMDGTSYYNSHSH
SGEEYLNPMPQLDIGALENVFTAPTSTPSSIQQVNVTDSDEEEEEKVLRNL
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagcaagagaagtgccccccccccgccctccccccaccccccgccaactgcca
cgggcgaccccgccgcgcccgctgcgtcctgctccgccctcgctgcccgtcgagggcgcc
tccttccgggcagcggccgcggagccctctccgtcgccgcccaccccgtgcgcggccgcc
attgcgaccgtcgcctcgtcgtgtggggaaccctcggcgttgagcgtacagccagcggca
cgacggctgctgcaggtgaagccggagcaggtgttactgctgccacccgggccaccactg
cctcaggcccgggaggaaggcgccgccacctctcccgcgcaggcgcggctgctgcagctg
aggcccgagctgctcctgctgccgccgccgccccccgcatctgagggcgtcccatgcagg
cctgagttgcacccgttgcagccccgagcgctgcacgttaaggcggagaagcaggagccg
ggacccggcttggatctgttggctgggcctcggagggccgttgaggcctgctctaaaacc
tccaggacggtgaaggcagaaggctctgggcccctcaacagccgccggggggacgagaag
aagggcaagttggaggcggaggagattgtgagctacgcagcaaaaggcgaagaaggcaaa
agcctggcagccctcagagaaggagtcatcaaaacggaggcgcctgagagacttcgagag
gactgcaggctcagtacagagcccgcgtccaatggcctggcccatggcagcaaggatgtc
atcctgacccagccatccactgcctttgggccacatcagcaagacctcaggatccctttg
actcttcacaccgtaccccctggggccaggatccagtttcagggaccaccaccttcagag
ctgatacgattgaccaaggtcccgttgacaccagtgcctattaaaatgcagtccttactg
gagccttctgtaaaaattgaaaccaaagatgtcccgctcacggtgcttccctcagatgca
ggaataccagatactcccttcagtaaggacagaaatggtcatgtgaagcgacccatgaat
gcatttatggtttgggcaagaatccaccggccagcactagccaaagctaacccagcagcc
aacaatgcagaaatcagtgtccagctcgggttagagtggaacaaacttagtgaagaacaa
aagaaaccctattatgatgaagcacaaaagattaaagaaaagcacagagaggaatttcct
ggttgggtttatcaacctcgtccagggaagcgaaaacgcttccctctaagcgtttccaat
gtattttctggtaccacacagaatatcatctctacaaatccaacaacaatttatccttat
cgctcacctacctactctgtggtaattcccagcctacagaacaccatcactcatccagtt
ggtgaatctccaccgaccatccagctgcccacacctgcagtccagcgtccaagccccatc
acacttttccagcccagcgtctccagtactgcccaggtgcctgtccaagctccaagtctg
cccctccgtccagcactcccaccccagcgctttgctgggccctcccaaacggacactcat
cggctgcattctggagtcaatcgctctgtgaagagacccactcctgtttctctggagagc
accaacaggattccgactagtgcaagtcctgcccattccagattttcaacctcaaccatc
caacctcccaaggagtatcccagcgtttccacttgtcccagaagtactccaatttcccag
gctcctcctattccacactcacatgtctaccagccccctccccttggccatccagctgca
ctgtttgggacaccaccaagattctcttttcatcacccttacttcctacctggacctcac
tacttcccatcaagcacgtgcccttatagtcggcctccctttggctatggaaattttcca
agttcaatgccagaatgccttggttattatgaagacaggtaccaaaaacatgaggctatg
ttttcagctttaaatagagactatccttttagagactacccagatgaacgcgctcacaac
gaagattctcgaagttgtgagaacatggatgggacttcttactataatagtcatagccac
agtggggaagaatacttaaatcccatgcctcagctggacattggagccttggagaatgtc
ttcacagccccgacatcaactccctctagtatccagcaagtcaatgtcactgacagtgat
gaggaggaagaagaaaaagtgctcaggaatttataa
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