Capra hircus (goat): 102178949
Help
Entry
102178949 CDS
T02910
Symbol
DHX36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
chx
Capra hircus (goat)
Pathway
chx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102178949 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102178949 (DHX36)
03012 Translation factors [BR:
chx03012
]
102178949 (DHX36)
Enzymes [BR:
chx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102178949 (DHX36)
Messenger RNA biogenesis [BR:
chx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102178949 (DHX36)
Translation factors [BR:
chx03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
102178949 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
PhoH
AAA_14
ATPase
AAA_34
NPHP3_N
AAA_23
DUF6782
ResIII
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
102178949
NCBI-ProteinID:
XP_013821075
UniProt:
A0A452F0A0
LinkDB
All DBs
Position
1:112964548..113012469
Genome browser
AA seq
1010 aa
AA seq
DB search
MSYDYHQNWGRDGGPRSSGGGYGGSYGGSYGGGHGGNRGSGGGGGGGGGRGGRGRHPGHL
KGREIGLWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLHSVQTKNDKDEEAQISWF
APEDHGYGTEAPAENKPNSVKNVEHQEKKMINQEKRPFRIRDKYIDRDSEYLLQENEPDA
ILDQQLLEDLQKKKTDLRYIEMQRFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTT
QVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQS
RLPRKQGSILYCTTGIILQWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRP
DLKVVLMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEHRSQF
KKGFMQGHVNRQEKEEKEAIYKERWPGYLRELRQRYSASTVDVIEVMDDEKVDLNLIAAL
IRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFK
RTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQ
RKGRAGRVQPGHCYHLYNSLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAHFLSRL
MDPPSNEAVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPV
LTIAASLSFKDPFVIPLGKEKVADARRKELAKDTKSDHLTVVNAFKGWEKAKQRGFRYEK
DYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPQDPESNINSDNEKIIKAVICAG
LYPKVAKIRLNLGKKRKMVKVYTKTDGVVAIHPKSVNVEQTEFNYNWLIYHLKMRTSSIY
LYDCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQ
EKIESPHPVDWKDTKSRDCAVLSAIIDLIKTQEKATPRNLPPRFQDGYYS
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgactaccatcagaactggggccgcgatggtggcccccgcagctctggcggg
ggttacggaggaagctatggaggcagctatggaggaggccatggggggaaccgaggctct
ggaggtggcggcggcggagggggtggtcgaggcggccgaggccgacatcccgggcacctg
aaaggccgcgaaatcggcttatggtacgcgaagaaacaaggccagaagaacaaggaagca
gagaggcaggagagagctgtagtacatatggatgaacgtcgagaagaacaaattgtgcag
ctgctgcattctgtgcaaactaagaatgataaagatgaagaagcacagatatcctggttt
gctcctgaagatcatggatacggtactgaagctcctgctgagaacaaaccaaattcagta
aagaatgttgagcatcaagaaaaaaaaatgataaatcaagaaaagaggccatttagaatc
agggacaaatacattgatcgtgattctgaatatctcttgcaagaaaatgaaccagatgca
attctagaccaacaattattggaagatttacaaaagaagaaaactgaccttcggtatatt
gaaatgcagcgtttccgggaaaagctgccgtcatatggaatgcaaaaggaattggtaaat
atgattgataaccatcaggtaacagtgataagtggtgaaaccggttgtggaaaaaccact
caagttactcagttcattttggataactacattgaaagaggaaaaggatctgcttgcagg
atagtttgtactcagccaagaagaattagtgccatttcagttgcagagagagtggctgca
gaaagggcggaatcttgtggcaatggtaatagtactggataccaaattcggctccagagt
cggttgccaaggaaacaaggttctatcttatactgtacaacaggaatcatccttcagtgg
cttcagtcagacccccatctgtccagtgttagtcatatcgtgcttgatgaaatccatgag
agaaatctacagtcagatgttttaatgactgttgttaaagatcttctcagttatcgacct
gacctgaaagtagtattgatgagtgcaacattgaatgctgagaaattctctgaatatttt
ggtaactgtccaatgatacatatacctggctttacttttccagttgtggagtatcttttg
gaagatataattgaaaaaataagatatgttccagaacaaaaagaacacagatcccagttt
aagaaaggtttcatgcaagggcatgtgaatagacaagaaaaagaagaaaaagaagcaatc
tataaagaacgctggccaggttatctaagggaattgagacaaaggtattctgcgagcact
gtagatgttatagaagtgatggatgatgaaaaagttgatctgaatttgattgctgccctt
attcgatacattgttttggaagaagaggatggtgcaatattggtctttctaccaggctgg
gacaacatcagcactttacacgatctcttgatgtcacaagtgatgtttaaatcagacaag
tttattattatacctttacattctctgatgcctacagttaaccagacacaggtgtttaaa
agaactcctcctggtgttcggaaaatagttattgctaccaacattgcagagactagcatt
accattgatgatgtagtttatgtaatagatggaggaaaaataaaagagacgcactttgac
acacagaacaacatcagtacaatgtctgctgagtgggttagtaaagctaacgctaaacag
aggaaaggtcgagctggaagagttcaacctggtcattgctatcatctatataacagtctt
agagcaagccttctagatgactatcaactgccagaaattttaagaacgcctttggaagaa
ctttgtttacagataaagattttaagactaggtggaattgctcactttcttagtaggcta
atggatccaccatcgaatgaagcagtgttactctccataaaacacctgatggaactgaat
gctttggataaacaagaagaattgacgcctcttggagttcacttagcacgattaccagtt
gaaccacacattgggaaaatgattctttttggagctctgttctgttgcttagacccggta
ctcaccattgctgctagtctcagcttcaaagatccctttgtgattccactgggaaaagaa
aaggtcgcagatgcaagaagaaaggaattggcaaaggatacgaaaagtgaccacctgact
gttgtgaatgcatttaagggatgggaaaaagctaaacaacgtggtttcagatatgaaaaa
gactattgctgggaatattttctatcttcaaacacattgcagatgctgcataacatgaaa
gggcagtttgctgagcatcttcttggagctggatttgtaagcagtagaaatcctcaagat
ccagaatctaatataaattcagataatgagaagataattaaagctgtcatctgtgctggt
ttatatcccaaagttgctaaaatccgactaaatttgggtaaaaaaagaaaaatggtgaaa
gtttacacaaagactgatggagtagttgctattcatcctaaatctgttaatgtggagcaa
acagagtttaactacaactggcttatctatcacctgaagatgaggacaagtagtatatac
ttgtatgactgcacagaagtttccccatactgtctcttgttctttggaggtgatatatcc
atccagaaagataatgatcaggaaactattgctgtagatgagtggataatctttcagtct
ccagcaagaattgcccatcttgttaaggaattaagaaaggaactagatatccttctgcaa
gagaagattgaaagtccccatcctgtagactggaaggacactaaatcaagagactgtgca
gtactctcagctattatagacttgatcaaaacacaagaaaaagcaactcccaggaacttg
ccaccacgtttccaggatggatattacagctga
DBGET
integrated database retrieval system
