Capra hircus (goat): 102179302
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Entry
102179302 CDS
T02910
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
chx
Capra hircus (goat)
Pathway
chx04270
Vascular smooth muscle contraction
chx04360
Axon guidance
chx04611
Platelet activation
chx04625
C-type lectin receptor signaling pathway
chx04810
Regulation of actin cytoskeleton
chx05135
Yersinia infection
chx05152
Tuberculosis
chx05163
Human cytomegalovirus infection
chx05200
Pathways in cancer
chx05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
102179302 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
102179302 (ARHGEF12)
04625 C-type lectin receptor signaling pathway
102179302 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
102179302 (ARHGEF12)
09158 Development and regeneration
04360 Axon guidance
102179302 (ARHGEF12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102179302 (ARHGEF12)
05205 Proteoglycans in cancer
102179302 (ARHGEF12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
102179302 (ARHGEF12)
09171 Infectious disease: bacterial
05135 Yersinia infection
102179302 (ARHGEF12)
05152 Tuberculosis
102179302 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chx04131
]
102179302 (ARHGEF12)
Membrane trafficking [BR:
chx04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102179302 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
AAA_23
Motif
Other DBs
NCBI-GeneID:
102179302
NCBI-ProteinID:
XP_005689613
UniProt:
A0A452G9J3
LinkDB
All DBs
Position
15:complement(51277677..51452150)
Genome browser
AA seq
1543 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHGSILNRESPTDKKQKVERSTSHDFDPTDSSFKKTKSSSEE
SRSEIYGLVQRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGT
LVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVEPSVTGHMSPIMTSPHSPG
ASGNMERITSPVLMGEENNVVHNQKVEILRKMLRKEQERLQLLQEDYNRTPAQRLLKEIQ
EAKKHIPQLQEQLSKATGSAQDGAVVTSSKPLGDGLAVGEGEADAGDGPGRLDYGSGDTS
RPRSDSADSPKSGLKEKIYLEENPEKSEAVQDTDTQSLVGSPSTRVAPHIIGAEDDDFGS
EHEQINGQCSCFQSIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRR
VFLEFHQFFLDRSAHLKVSVPDEISVDLEKRRPELIPEDLHRHYIQTMQERVHPEVQRHL
EDFRQKRSMGLTLAESELTKLDVERDKDRLTLEKERACAEQIVAKIEEVLMTAQAVEEEK
SSTMQYVILMYMKHLGVKVKEPRNLEHKRGRIGFLPKIKQSMKKDREGEEKGKRRGFTSI
LGPPRRPSRHDNSAIGRAMELQKQRHPKHLSTPSSVSPEPQDSAKLRQGGLASEGADIGY
LPANSTSSMVSGATLSQEAGKENDMGSKQAGEMPASGDSLDGTPRTPNTIFDFPPPPLDQ
VQEEEWEVERVTEHGTPKPFRKFDSIAFGESQSEDEQFENDLETDPPNWQQLVSREVLLG
LKPCEIKRQEVINELFCTERAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDILQ
LHIGLNEQMKAIRKRNETSVIDQIGEDLLIWFSGPGEEKLKHAAATFCSNQPFALEMIKS
RQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPPEREKV
KKAADHCRQILNYVNQAVKEAENKQRLEDYQRRLDTSNLKLSEYPNVEELRNLDLTKRKM
IHEGPLVWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVI
KLNTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQSTK
PIPLPQPPPCEGDNDEEPPKLKVEHHDISVTGLQSPDRDLGLESPLMSSKPQSHSLGTSG
KSEVDDLFVAERQFAKEQHADGTLKEVGVNYQIIIPDPHLPVSEERWALDALRNLGLLKQ
LLVHQLGLTEKSTQEDWPHFPRCRTASLGVQADSGTQNPENIKACHPVEAQMPFRTGTGD
ISTCYSPRTSTESSAPRDSVVLAFQESQASDILVMDHMIMTPEMPPSEPEGGLDESGEHF
FDAREAHSDDNPSEGDGAVKKEEKDVNLRISGTYLILDGYDPVQESSTDDEVASSFPLQP
GAGIPSLDSGHQQQPSPQNAHSDGAVSPLTSEFLIQQRWGTMEDSCFEIQSPSACADSQS
QIMEYIRKIEADLEHLKKVEESYTILCQRLAGSALTDKHSDKS
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtctactatcaccgacaggtttcccctcaaaaaacctataaggcat
ggaagtattttgaaccgagagtcaccaacagataagaagcagaaagttgagcgcagtaca
tcacatgattttgaccccacagatagctccttcaagaagacaaagtctagttcagaggag
agtagatccgagatatatggtcttgttcagcgttgtgtgatcatccagaaggatgacaat
ggatttgggctgacggtcagtggagacaacccagtgttcgtacagtctgtcaaagaagat
ggggcagccatgcgggctggagtacagacaggtgatcgaatcatcaaggtgaatggaact
ctggtgactcattcaaaccatttggaagtggtgaagctaatcaaatctggttcctatgta
gctctcactgttcagggacgcccacctgggtcgccccagattccacttgctgattctgaa
gtagagccatcagtcactggacatatgtctcccatcatgacatcccctcattcacctgga
gcatctgggaatatggagagaattactagtcctgtgctcatgggggaagaaaacaatgtg
gttcataaccagaaagtagaaattctgagaaaaatgttacggaaagaacaggaacggctt
cagctattgcaggaagattacaaccgaacacctgctcagagattgctaaaagagatccag
gaggccaagaaacacattcctcagctgcaagagcagttgtccaaagccacgggctctgct
caggatggagctgtagttacatcctccaagccattaggtgacgggctagcagtcggtgaa
ggagaagcagatgctggtgatgggccaggcaggcttgactatggcagcggagacacttct
cggcctaggagtgacagtgccgatagtcccaagagtggcttgaaagagaagatttatcta
gaggaaaacccagagaaaagtgaagcagttcaggacactgacactcagtcacttgttggg
agtccctctacccgtgtggcacctcatattattggagccgaggacgatgactttggtagt
gaacatgaacagatcaatgggcagtgcagctgttttcagagcattgaactgctaaaatct
cgccctgctcacttggctgtcttcttacaccatgtagtttcccagtttgaccctgcaaca
ttgctctgttatctctattcagacctatataaacagaccaattccaaggagacccgtcgt
gtcttccttgagttccaccagttcttcctggatcgatctgctcacctgaaggtttctgtt
cctgatgaaatatcagtagatctagaaaaaagacgaccagagcttattcctgaggatcta
catcgccactatatccaaactatgcaagaaagagtccacccagaagttcagaggcacttg
gaagattttcggcagaagcgcagcatggggctgaccttggctgaaagcgaactgactaaa
cttgatgtagagcgagacaaggaccggttaactttggagaaagaacgggcatgtgcagaa
cagattgttgccaaaattgaagaagtgttgatgactgctcaggctgtagaagaagaaaag
agttcgacaatgcaatatgttattctcatgtacatgaaacatttgggagtaaaagtgaaa
gaacctcgaaatttggagcacaagcgaggtcgcattggattccttccaaaaatcaagcaa
agtatgaagaaagatagagaaggcgaagaaaaggggaagcgaagaggattcaccagcatc
ttgggaccccctaggagaccaagccgccacgacaacagtgcaattggcagagccatggaa
ctacagaagcagcgccaccctaagcacttgtccacgccctcatctgtgagtcctgaacct
caggattctgcaaagttgcgccagggtggattagcaagcgaaggagcagacattggctac
ctgccagccaattccacgtcctccatggtttcaggggccactctttcccaggaagcaggg
aaagagaatgatatgggatcaaaacaagctggagaaatgccagcatctggagactccttg
gatggcactcctcgtactcccaacaccatctttgatttcccacctcctccattagaccag
gtgcaggaggaggaatgggaagtggaaagagtgactgaacatgggacaccaaagcctttt
cgaaagtttgacagcatagcttttggagaaagtcagagtgaggatgaacagtttgaaaat
gacttagagacagacccacccaactggcaacagctcgtcagtcgagaagtgttattggga
ctaaagccttgtgagatcaaaagacaggaagtaattaatgaattgttctgcactgaaaga
gctcatgttcgaacattgaaggttctagatcaagtgttttatcagcgagtgtccagagaa
ggaattttgtcaccttcagaactacggaaaattttttcaaacttagaagatattcttcaa
cttcacattggattgaatgagcaaatgaaggctattcggaagaggaatgagacctctgtt
attgatcagattggggaagatttgctgatctggttcagtggacccggggaggaaaagttg
aaacatgctgctgccaccttttgcagtaaccaaccctttgccctggaaatgatcaagtct
cgccagaaaaaggattctcgattccagacttttgtgcaagatgctgagagtaatccactg
tgtcgtcgtctgcagcttaaggatatcattcccactcaaatgcagaggcttactaagtac
cctcttctcttggacaatattgccaaatacacagagtggccaccagaaagggagaaggtg
aagaaagctgcagatcactgtcgtcagatcttaaattatgtgaaccaggctgttaaggag
gcagagaacaagcagcgcttggaagattatcagcgtcgccttgatacctctaatctgaag
ttgtcagaatacccaaatgttgaagagctcaggaatttggatttaacaaaaaggaagatg
attcatgaaggcccattggtttggaaggtgaatagagataaaactattgatctatataca
ttgctgctggaagatattcttgtattgttacagaagcaggatgataggctggtattaagg
tgtcacagtaagattctggcatctacagctgacagcaaacacacatttagccctgtcatc
aagttgaatacggtgttggttcgacaagtggcaacagataacaaagctttattcgtcatc
tccatgtctgataatggagcccaaatttatgaactggtggcacagacagtttctgaaaag
actgtctggcaggacctaatatgtcggatggccgcatccgtgaaggagcagtccacaaag
ccgatcccactgccccagccgccgccgtgcgaaggagacaatgatgaagaacctccaaaa
ttaaaagtggagcatcatgacatttcagtcactggtctgcagagtccagacagagatttg
ggattagagtctcctttaatgtcatcaaaacctcagtctcattcgctgggtacctctggg
aagtcggaagtagatgacctctttgtggctgagagacagtttgcaaaggagcagcatgca
gacgggacactaaaggaagttggagtgaattatcaaatcataatcccagatccacacttg
cctgtctcagaagaacggtgggcactggatgcactaaggaatttgggtttgttgaagcag
ctgctggtacaccagctgggcttgactgagaagagcactcaggaagactggccacatttt
ccaagatgcaggacagcctctctgggggtgcaggcagacagtggaacccagaaccctgaa
aatattaaggcctgtcatcctgttgaagcacagatgccctttagaactggaactggtgac
atttcaacttgttacagtccacggacttcaactgaatcttctgctccacgggattcagta
gtactggcattccaagagagccaggcaagtgacattttagtaatggaccacatgattatg
accccagagatgcctccctcagagccagaagggggtcttgatgagagtggagagcacttt
tttgatgcccgtgaagcacatagtgatgataatccatcagaaggtgatggagcagttaaa
aaggaagagaaggatgttaatttgcgcatctcaggaacctatctgatccttgatggctat
gacccggtgcaggagagctccacagacgacgaggttgcttcctcgttcccccttcagccc
ggggcaggcatcccctctctggactctggacaccagcagcagccttctccccagaatgct
cattctgacggggctgtttcaccactcacctcagaattcctgatccagcagcgctgggga
actatggaggattcctgttttgagatccagagtccctctgcttgtgctgattcacaaagc
cagatcatggagtacattcgtaaaatagaggctgaccttgaacacttaaagaaggtggag
gaaagttacaccattctttgccaaaggctggctggatcagccctcacagacaagcactca
gataaaagttag
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integrated database retrieval system
