Capra hircus (goat): 102179584 Help Entry 102179584         CDS       T02910                                  Symbol RC3H1 Name (RefSeq) roquin-1 isoform X3   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism chx  Capra hircus (goat) Brite KEGG Orthology (KO) [BR:chx00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:chx03000]     102179584 (RC3H1)    04121 Ubiquitin system [BR:chx04121]     102179584 (RC3H1) Transcription factors [BR:chx03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     102179584 (RC3H1) Ubiquitin system [BR:chx04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     102179584 (RC3H1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 Prok-RING_4 zf-CCCH zf-C3HC4_3 zf-C3HC4 zf-CCCH_UNK zf-C3HC4_2 FYVE zf_CCCH_4 zf-CCCH_4 Vesi_VP2 PaaA_PaaC Baculo_IE-1 zf-RING_4 zf-RING_6 zf-RING_10 Motif Other DBs NCBI-GeneID:  102179584 NCBI-ProteinID:  XP_005690956 UniProt:  A0A452DP18 LinkDB All DBs Position 16:complement(53811350..53885227) Genome browser AA seq 1123 aa AA seqDB search MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG LNSTAQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSTAILPEE GAVDLPSRKTPALPNGIVSSGNTVTQLIPRGTDPSYESSLKPGKIDHLSSSAPGSPPDLL ESVPKSISALPVNPHPVPPRGPTELPPMPVTKPLQMVARGSQLYPAQQADVYYQDPRGAA PPFEPAPYQQGMYYPPPPQCVSRFVRPPPSAPEPGAPYLDHYPPYLQDRVVNSQYGTQPQ QYPPMYPPHYDGRRVYPAQSYAREEIFRESPIPIEIPPAAVPPYVPEPRERYQQMEGYYP VAPHPTQIRPSYNREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSP TLPPTFHQEEFLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEM MNVESKGMRDQRLDLQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPVQAMA PQGAPTKSINISDYGPYGTHGGWGGSPYSPHQNIPSQGHFSERERISISEVASHGKPLPS AEREQLRLELQQLNHQISQQTQLRGLEREANTLAGQSQPPPPPPKWPGMISSEQLSLELH QVEREIGKRTRELSMENQCSLDMKSKLNTSKQAENGQPEPQNKVPAEDLTLTFSDVPNGS ALTQENISLLSNKTSSLNLSEDPEGGGDNNDSQRSGVTSSSTP NT seq 3372 nt NT seq  +upstreamnt  +downstreamnt atgcctgtacaagctccacagtggacggatttcctctcctgcccaatttgcactcagact tttgacgaaacaattagaaagcccatcagtttgggttgtggccatactgtctgcaagatg tgcctgaacaaactccaccgcaaggcttgcccatttgaccagaccactatcaatacagac attgaactcctcccagtgaactcagcattgttgcagctagtgggtgctcaggttcctgag cagcagcccattactttgtgtagtggggttgaagatacaaagcattatgaggaagccaag aaatgtgtagaagaattagcactgtacctgaaaccactcagcagtgctagaggagtgggt ctgaatagtactgctcagagtgttctgagtcgcccaatgcagaggaagctagtgacgctg gtccactgccaactagtggaagaagaaggcaggattcgtgccatgagggcagctcgatct ttaggtgaacgaacagttacagagctcattctccaacaccagaatcctcagcaactctct tctaatctttgggcagcagtcagagctagaggctgccagttccttggaccagcaatgcag gaggaagccctaaagctggttctcctggccttagaagatggttctgctttgtctagaaaa gtattggttctctttgtggtgcaaagattggaaccacggtttcctcaagcctctaaaact agcattgggcatgttgtccagctcctttatagagcctcctgcttcaaggtcaccaaacgt gatgaagactcttctttgatgcagctgaaagaagaatttagaacctatgaagctctgcgg cgagaacatgactcccagatagtgcagattgctatggaagcaggcttgcgaattgcacca gaccagtggtcctctttgctgtatggggaccaatctcacaaatctcatatgcagtccatt attgacaagttgcagaccccagcctcttttgcacaaagtgttcaggaactaacaattgct ctccagcggactggagatccagcaaacttgaatcgactaagaccccatttggagctatta gcaaacattgaccctagtccagatgctcctcctcctacttgggaacagctagaaaatggg ttggttgctgtgcgtacagtggtacatgggctggttgattatatccagaatcacagcaaa aaaggaacagatcaacagcagcctccacagcatagcaaatataaaacatacatgtgtcga gacatgaagcagagaggaggatgccctcggggggccagctgtacattcgcacactcacag gaggaactggaaaaatttcgtaaaatgaacaaacgcctagttcccagaagacccctgagt gcctctttgggtcaacttaatgaggtgggcctgccttcaacagctatccttccggaagaa ggggcagtggatctgcctagcagaaaaacccctgctctgccaaatgggattgtatcatca gggaatacagtaacacaactgattccacgagggacagaccccagctacgagtccagtctg aaaccgggaaagatcgatcacctgagcagtagtgcccctgggtctcctcctgacctgcta gaatcagtccctaagagtatttctgccttgcctgttaatccacatcctgtacctccaaga ggaccaacagagctgccccctatgcctgtcactaaacctcttcagatggtggcgcgaggt tctcagctctatccagcacagcaggctgatgtttattaccaggatcctcgaggagccgct ccgccgtttgaaccagcaccttatcagcagggtatgtactatccaccaccaccacagtgt gtgtcccgttttgtccgacctccaccatctgctcctgaaccaggtgctccctacttggat cattatccgccatacctccaagatcgtgtagtaaactcacagtatggcacacagccacaa cagtacccacctatgtacccaccacactatgatggccgtcgagtataccctgctcagtct tatgcaagagaggagattttccgagaaagtcctatacccattgagattccacctgcagca gtgccaccctatgtaccagaacccagagaaagataccaacaaatggaaggttactatcca gtggctccacacccaactcagatcagaccttcatacaacagagagcctccgtacagtcgg cttccgcctcctccccagccccatcctagtctagatgagctacatcgaagacgaaaggaa ataatggcacagctagaagaaaggaaggttatctctccacctccttttgcaccttcacca acattgcctcctaccttccatcaggaggagtttttggatgaagacttgaaggtagctggg aaatacaaaggaaatgattatagccagtattcaccctggtcatgtgacactattggctcc tacattggaaccaaagatgcaaaacctaaagatgttgtggcagcagggagtgtggaaatg atgaatgtggagagtaaaggaatgagagaccagcgattggaccttcagagaagagcagca gaaaccagtgatgatgatctcatcccatttggagaccgaccaacagtatctcggtttggt gccatttctcgaacttccaaaacgatatatcagggtgctggcccagtgcaggctatggca cctcagggagctccgacaaaatctattaacatttcagattatggtccatatggaacccat ggtggctggggaggttctccatattctcctcatcaaaacataccttctcagggacacttc agtgagagggagagaatatctatatcagaagtggctagtcatggaaaaccccttccgtct gctgagagggaacagctacgactagaattacagcagctaaaccatcaaattagccaacag acccagctacgtggactagagagggaggcgaacaccttggcaggccagtcacagccccca ccaccacctccaaaatggcctggaatgatctcaagtgagcagttgagcttggagctgcac caggtggaaagggaaattgggaagagaacccgggaactgagtatggagaaccagtgttct ctggacatgaaaagcaaattgaatacaagtaagcaagcagaaaatggacaaccagaacca caaaataaggttccagctgaggaccttacgttgacattcagtgatgtgcctaatggatca gcattgacacaagagaatatcagcctcctgtccaacaagaccagctctctgaacctgtca gaggaccctgagggaggaggggacaataatgactcccagagatcaggagttacatccagt tctactccctaa

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