Capra hircus (goat): 102179725
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Entry
102179725 CDS
T02910
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
chx
Capra hircus (goat)
Pathway
chx03013
Nucleocytoplasmic transport
chx05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102179725 (NDC1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102179725 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102179725 (NDC1)
Messenger RNA biogenesis [BR:
chx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102179725 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
102179725
NCBI-ProteinID:
XP_017899855
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All DBs
Position
3:complement(28342164..28401169)
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AA seq
706 aa
AA seq
DB search
MGPSGGLPPFELRWRAGSLYPAPLRVGAAITMATAASRPCPGGSRDILWRVLGWRIVTSI
VWSVLLLPICTTVFVIFSSIDLFHPIQWLSASFNDLYNSYIIFYLLLLSVVVVIISIFNV
EFYTVVPSIPCSRLALIGKILHPQQLMHSFIHAAMGMMMAWCATVITKGQYSFLVVPCTG
TESLDSPAVQTCLNEYHLFFLLAGAFMGYSYSLLYFINNMNYLPFPIIQQYKFLRFRRSL
LLLVKHSCVESLFLLRNFCIVYYFLGHIPKAWISTAMDLQIDKQFHRPLDTVSGLLNLPL
LYHVWLCGVFVLMTWYISWLLFRIYATEAHLFPVQPPFSEDSDECLPKVLNSNPPLIIKY
LALQDLMLLSQYSPSRRQEVFSLSQPGGHPHNWTAISRECLNLLNDMTQKLVLYQEAAAT
NGRVMSSSYPAEPKKSNSPEETAFQTPKSSQMPRTSMPSLIKTSLFSSKLSTPDVASPLA
TPFGSSVVNRMAGIFDVNTSYGSPQSPQLTRRGPRLWTSASDQQMTEFSNPSPSTSVSAE
GKTVRQPNVIYSWIQNKREQVKNFLSKRVLIMYFFSKHPEASIQAVFSDAQMHIWALEGL
SHLVAASFTEDRFGVVQTTLPAILNTLLTLQESVDKYFKLPHVSSKPPRISGSLVDTSYK
TLRFAFRASLKTAIYRITTTFGDHLNAVQASAEHQKRLQQFLEFKE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggggccctccgggggccttcctccctttgaactgcggtggcgggcgggctcgctgtat
cctgcacccctcagagtaggggccgccatcaccatggccacggctgcgagtcggccctgc
cccggagggtcgcgggacatcctgtggcgcgtgttgggctggaggatagttacaagcatt
gtctggtcagtgctgctgctgcccatctgtaccacagtatttgtaatcttcagcagcatt
gatttatttcatcctatacagtggctgtctgcttctttcaatgatctgtataattcctac
attatcttttacctcctgctgttgtcagtggtagttgtaataataagtattttcaatgtg
gagttctatacagttgtgccttccattccctgctcaaggctggcactgatagggaagatc
cttcacccgcagcagctcatgcactcctttatccacgctgcaatgggaatgatgatggct
tggtgtgccacagtgataaccaagggccagtacagcttccttgtggttccctgcactggt
accgagagcttagatagtcctgctgtacaaacctgcttaaatgagtatcaccttttcttc
ctactggccggagcatttatgggctatagctatagcctcctgtattttattaacaacatg
aactatcttccgtttcccatcatacagcaatacaagttcttacgcttcaggaggtctctg
ctcttgctagttaagcatagttgtgtggaatcactgttcctgcttagaaatttctgcatt
gtgtattattttcttggtcatattccaaaagcttggattagcactgccatggaccttcag
atagataagcagtttcataggcctcttgacactgtgagtggcctcttgaatctcccgttg
ctctaccacgtctggctgtgtggtgtctttgtcctgatgacctggtacatctcatggctg
ctcttcagaatctatgccacagaggctcatctgttccctgttcaaccaccattttcagaa
gactcagatgaatgcctcccaaaagttttaaacagcaatcctcccctcatcataaagtat
ttggccctgcaggacctgatgttgctttctcaatattctccttcacgaagacaagaagtt
tttagccttagccaaccaggtggacatccccacaattggacagctatttcaagagagtgt
ttgaatcttttaaatgatatgactcagaaacttgtgctctaccaagaagctgctgctacg
aatgggagagtgatgtcttcatcgtacccagcggaacctaagaaatcaaattctccagaa
gaaactgcatttcagacccccaaatctagccagatgcctcggacttcaatgccatcatta
attaagacatcactgttctcctcaaagttatctacacctgatgttgcaagtcccctggcc
accccatttggctctagtgtagtgaaccggatggctggaatttttgatgtaaacacaagc
tatgggtcacctcaaagtcctcagctcacaagaagagggccaagattatggacttcagct
tctgatcagcaaatgactgaattttctaacccttctccatctacctctgttagtgctgag
ggtaagacagtgagacagcccaatgtgatttactcatggatccagaataaacgtgaacag
gttaagaatttcttatcaaaacgagtgctgataatgtattttttcagtaagcacccagag
gcctccattcaggctgtgttttcagatgcccaaatgcatatttgggcattagaaggtctg
tctcacttagtagcagcatcatttacagaagatagatttggcgtagtccagaccacacta
ccagctattcttaatactttgttgacgctgcaagagtcagttgataagtacttcaagctt
cctcatgtttccagtaagccacctcggatttcaggaagcctggtggacacttcctataaa
acgttaagatttgcgtttagagcatctctgaaaacagccatctataggataaccactaca
tttggtgaccatctgaatgctgtgcaagcatctgcagaacatcagaagagacttcagcag
ttcttggagttcaaagaatag
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