KEGG   Capra hircus (goat): 102180146
Entry
102180146         CDS       T02910                                 
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
  KO
K23625  ataxin 2/2L
Organism
chx  Capra hircus (goat)
Pathway
chx05014  Amyotrophic lateral sclerosis
chx05017  Spinocerebellar ataxia
chx05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:chx00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    102180146 (ATXN2)
   05017 Spinocerebellar ataxia
    102180146 (ATXN2)
   05022 Pathways of neurodegeneration - multiple diseases
    102180146 (ATXN2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:chx03019]
    102180146 (ATXN2)
Messenger RNA biogenesis [BR:chx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102180146 (ATXN2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 LSM
Other DBs
NCBI-GeneID: 102180146
NCBI-ProteinID: XP_017916728
LinkDB
Position
17:15957747..16058581
AA seq 1297 aa
MRPAAAAPRGPAAAIEPRRFAAARWPGRRSLARPARRGGGGGAPGPYPSAAPPPPGPGPP
PSGQRSPPSSSDCFGSNGGAARPGSRRLLGFGGPPRPFVVLLLPLAGPGAPPAAPTRASP
LGARASPPRSGVSSARPAPGCPHPACGPVYGPLTMSLKPQQQQQQQQQQPQPAAANARKP
GGGGGGGLLTSPAAAPSSVSSSSAAASSSSSSVAAASAGGGRPGLGRGRNSSKGLPQSTI
SFDGIYANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHEKSTESSS
GPKREEIMESILFKCSDFVVVQFKDMDSSYARRDAFTDSAISAKVNGEHKEKDLEPWDAG
ELTTNDELEALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKR
EARANQLAEEIESSAQYKARVALENDDRSEEEKYTAVQRNSSEREGHNINTRENKYIPPG
QRNREVISWGSGRQNSPRMGQPGSGSMPSRSTSHTSDFNPNSGSDQRVVNGGVPWPSPCP
SPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSS
EGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHTPPSEAAAPPTARTSPAGGTWSSVV
SGVPRLSPKTHRPRSPRQNSIGNTPSGPVLASPQAGIIPAEAVAMPVPAASPTPASPTSN
RAVTPSLEAKDSRLQDQRQNSPAGNKENMKPNETSSSFSKAENKGISPIVSEHRKQIDDL
KKFKNDFRLQPSSTSESMDQLLNKNREGEKSRDLIKDKIEPNAKDSFIENSSNCTSGSSK
PSSPSISPSVLSNTEHKRGPEVTSQGVQTSSPGCKQEKEDKEEKKDAAEQVRKSTLNPNA
KEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGV
QPLYPIPMTPMPVNQAKTYRAGKVPNMPQQRQDQHHQSTMMHPASAAGPPIVATPPAYST
QYVAYSPQQFPNQPLVQHMPHYQSQHPHVYSPVIQGNARMMAPPTHAQPGLVSSSATQYG
AHEQTHAMYACPKLPYNKETSPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPTGQ
QQSQHGGSHPAPSPVQHHQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQN
SFPAAQQTVFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGG
PQAALAQSALQPIPVSTTAHFPYMTHPSVQAHHQQQL
NT seq 3894 nt   +upstreamnt  +downstreamnt
atgcgcccggcggccgcagctcctcggggccccgcggcggctatcgagcctcgtcgcttc
gctgcggccaggtggcctgggcggcgctcgctcgcgcgcccggcgcggcggggcggcggc
ggcggggctccgggaccgtatccatccgccgcccctcccccgcccggccccggcccccct
ccctccgggcagcgctcgcctccctcctcctcagactgttttggtagcaacggcggcgcg
gcccggcccggctcccggcgacttctcggtttcggcgggcctccccgcccgttcgtcgtc
ctccttctccccctcgccggcccgggcgcccccccggccgcgccaacccgcgcctccccg
ctcggcgcccgcgcgtccccgccgcgctccggcgtctcctcggcgcgcccggctcccggc
tgtccccacccggcgtgcgggccggtgtatgggcccctcaccatgtcgctgaagcctcag
cagcaacagcagcagcagcagcagcagccgcagcccgcggccgccaatgcccgcaagcct
ggcggcggcggcggcggcggccttctcacgtcgccggccgccgcgccgtcctcagtctcg
tcgtcctcggccgcggcttcctcctcctcctcctcagtggcggcagctagcgcaggcggc
gggcggccgggcctgggcagaggccgaaacagtagcaaaggactgcctcaatccacgatt
tcttttgatggaatctatgcaaatatgaggatggttcatattcttacatcagttgttgga
tccaaatgtgaagtacaagtgaaaaatggaggtatatatgaaggagtttttaaaacatac
agtcctaagtgtgatctggtacttgatgctgcacatgagaaaagtacagaatccagttcg
gggccaaaacgtgaagaaataatggagagtattttgttcaagtgttcagactttgttgtg
gtgcagtttaaagatatggactccagttatgcaagaagagatgcttttactgactctgct
atcagtgctaaagtgaatggtgaacacaaagagaaggacctggagccctgggatgcaggt
gaactcactaccaatgacgaactggaggctttggaaaatgatgtttctaatggatgggat
cccaacgatatgtttcgatataatgaagaaaattatggtgtagtgtctacatatgatagc
agtctgtcttcatatacggtgcccttagaaagggataactcagaagaatttttaaaacga
gaagcaagggcaaaccagttagcagaagaaattgaatcaagtgcccagtataaagcccgg
gtggccctggaaaatgatgataggagtgaagaagaaaaatacacagcagttcagagaaat
tccagtgaacgtgagggccacaacataaacactagggaaaataaatatattcctcctgga
caaagaaatagagaagtcatatcctggggaagtgggcgacagaattcaccacgtatgggc
cagcctggatcgggctccatgccatcaagatccacctctcacacttcagatttcaacccg
aattctggttcagaccaaagagtagttaatggaggtgttccctggccatcgccttgccca
tctccttcctctcgcccaccttctcgctaccagtcaggtcccaactctcttccacctcgg
gcagccacccctacacggccgccctccaggcccccctcgcggccatccagacccccgtct
cacccctctgctcatggttctccagctcctgtctctactatgcctaaacgcatgtcttca
gaagggcctccacggatgtccccaaaggcccagcgacaccctcgaaatcacagagtttct
gctgggaggggttccatttccagtggcctagaatttgtatcccataccccaccaagtgaa
gcagctgctcctccaacagcaaggaccagtcctgcagggggcacatggtcatcagtggtc
agtggagttccaagattatcccctaaaactcacagacccaggtctcccagacagaatagt
attggaaatactcctagtgggccagttcttgcttctccccaagctggtattatcccagct
gaagctgttgctatgcctgtaccagctgcatctcctacacctgccagtcctacatccaac
agagctgttaccccatctcttgaggctaaagattccaggcttcaagatcagaggcaaaac
tctcctgcagggaataaagaaaatatgaagcccaatgagacatcatccagcttctcaaaa
gctgaaaataaaggtatatcaccaattgtttctgaacatagaaaacagattgatgattta
aagaaatttaagaatgattttaggttacagccaagttctacttctgaatctatggatcag
ctgctaaacaaaaatagagagggagaaaaatcaagagatttgatcaaagacaaaattgaa
ccaaatgctaaggattctttcattgaaaatagcagcaactgcaccagtggcagcagcaag
ccgagcagccccagcatttccccttcagtcctcagtaacacggagcacaagaggggacct
gaggtcacatcccaaggggttcagacttccagtccaggatgtaaacaagaaaaagaagat
aaagaagagaagaaagacgcagctgagcaagtgaggaaatcaacgttgaatcccaatgca
aaggagttcaaccctcgttccttttctcagccaaagccttctaccaccccaacttcgcct
cgtcctcaagcacaacctagcccatctatggtgggtcatcagcagccaactccagtttat
actcagcctgtttgttttgcaccaaatatgatgtatccagtccccgtgagcccaggcgtg
caacctctgtatcctatacctatgacgcccatgccagtcaatcaagccaagacatataga
gcaggtaaagtaccaaatatgccccaacaacggcaagaccagcaccatcagagtaccatg
atgcacccagcctcagcagcaggcccaccaattgtggccaccccaccagcttattccaca
caatatgtcgcctacagtcctcagcagtttccaaatcagcctcttgttcagcatatgccg
cattatcagtctcaacatcctcatgtctatagtcctgtaatacagggtaatgctagaatg
atggcaccaccaacacatgcccagcctggtttagtgtcctcttcagcgactcagtacggg
gctcatgagcagacacatgcgatgtatgcatgtcccaaattaccatacaacaaggagaca
agcccttctttctactttgccatttccactggctcccttgctcagcagtatgcgcaccct
aatgctaccctgcacccacatactccacatcctcagccttcagctacgcccaccggacag
cagcaaagccaacatggtgggagccatcccgcacccagtcctgttcagcaccatcagcac
caggccgcccaggctctccatctggccagtccacagcagcagtctgccatttaccacgcg
gggcttgcgccaaccccaccttccatgacacctgcctccaatacacagtctccacagaat
agtttcccagcagcacagcagaccgtctttaccattcatccttctcatgttcagccggct
tacaccaatccaccccacatggcccatgtacctcaggctcatgtacagtcaggaatggtt
ccttctcatccaactgcccatgcgccaatgatgctaatgacgacacagccacccggcggt
ccccaggccgccctcgctcaaagtgcactacagcccattccagtctcgacaacagcgcat
ttcccttatatgacgcacccttcagtacaagcccaccaccaacagcagttgtaa

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