KEGG   Capra hircus (goat): 102180256
Entry
102180256         CDS       T02910                                 
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
chx  Capra hircus (goat)
Pathway
chx03013  Nucleocytoplasmic transport
chx03015  mRNA surveillance pathway
chx03040  Spliceosome
chx05014  Amyotrophic lateral sclerosis
chx05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:chx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102180256 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    102180256 (ALYREF)
   03015 mRNA surveillance pathway
    102180256 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102180256 (ALYREF)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    102180256 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:chx03019]
    102180256 (ALYREF)
   03041 Spliceosome [BR:chx03041]
    102180256 (ALYREF)
Messenger RNA biogenesis [BR:chx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     102180256 (ALYREF)
    TREX complex
     102180256 (ALYREF)
Spliceosome [BR:chx03041]
 Complex C
  Other components
   EJC/TREX
    102180256 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    102180256 (ALYREF)
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded
Other DBs
NCBI-GeneID: 102180256
NCBI-ProteinID: XP_017920943
LinkDB
Position
19:50373283..50377160
AA seq 257 aa
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVNRGGGPIRNRPA
IARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL
VTSQIDTQRRPAQSVNRGGMTRNRGSGGFGGGGGTRRGTRGGSRGRGRGTGRSSKQQLSA
EELDAQLDAYNARMDTS
NT seq 774 nt   +upstreamnt  +downstreamnt
atggccgacaaaatggatatgtctttggacgacatcattaagctgaaccggagccagcga
ggcggccgcggcgggggcaggggccgcggccgggccggctcccagggtggccgcggcggc
ggagcccaggccgccgcgcgagtgaaccgaggcggcggacccattcggaatcggccggcc
atcgcccgcggcgcggcgggcggcggcggcaggaaccggccggcgccctacagcaggccg
aaacaacttcctgacaaatggcagcatgaccttttcgatagcggttttgggggtggtgcc
ggcgtggagaccggtgggaaactgctggtgtcaaatctggattttggagtgtccgacgct
gatattcaggagctctttgctgaatttggaactctgaagaaggcggctgtgcactacgac
cgatctggccgcagtttaggaacagctgacgtgcactttgagcggaaggcagatgcacta
aaagctatgaaacagtacaacggcgttcctttggatggccgccccatgaacattcagctc
gtcacctcacagattgacacgcagcggagacctgcacagagtgtaaacagaggtgggatg
actagaaaccgtggttcaggaggtttcggtggcggcggtggcacccggagaggcacccgt
ggaggcagccggggcagaggcagaggcaccggcaggagttcaaagcagcagctttccgca
gaagaattagatgcccagctggatgcttataatgcaagaatggacaccagttaa

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