Capra hircus (goat): 102180436
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Entry
102180436 CDS
T02910
Symbol
PDCD6IP
Name
(RefSeq) programmed cell death 6-interacting protein
KO
K12200
programmed cell death 6-interacting protein
Organism
chx
Capra hircus (goat)
Pathway
chx03250
Viral life cycle - HIV-1
chx03272
Virion - Hepatitis viruses
chx04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102180436 (PDCD6IP)
03272 Virion - Hepatitis viruses
102180436 (PDCD6IP)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102180436 (PDCD6IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chx04131
]
102180436 (PDCD6IP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
chx04147
]
102180436 (PDCD6IP)
Membrane trafficking [BR:
chx04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
102180436 (PDCD6IP)
Exosome [BR:
chx04147
]
Exosomal proteins
Proteins found in most exosomes
102180436 (PDCD6IP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
CCDC93_N
Ly49
Motif
Other DBs
NCBI-GeneID:
102180436
NCBI-ProteinID:
XP_017922665
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Position
22:7900851..7970944
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AA seq
875 aa
AA seq
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MAAFISVQLKKTSEVDLAKPLVKFIQQTYPSGGEEQAQYCRAAEELSKLRRAALGRPLDK
HEGALETLLRYYDQICSIEPKFPFSENQICLTFTWKDAFDKGSLFGGSVKLALASLGYEK
SCVLFNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAFLHIKETVLSALNREPTVDIS
PDTVGTLSLIMLAQAQEVFFLKAARDKMKDAIIAKLANQAADYFGDAFKQCQYKDTLPKE
VFPVLAAKHCIMQAYAEYHQSILAKQQKKFGEEIARLQHAAELIKTVASRYDEYVNVKEF
SDKINRALTAAKKDNDFIYHDRVPDLKDLDPIGKATLVKSTPVNVPISQKFTDLFEKMVP
VSVQQSLAAYNQRKADLVNRSIAQMREATTLANGVLASLNLPAAIEDISGDTVPQSILTK
STSVIEQGGIQTVDQLIKELPELLQRNREILDESLRLLDEEEATDNDLRAKFKERWQRTP
SNELYKPLRTEGNNFRTVLDKAVQADGQVKERYQAHRDTIALLCKPEPELNAAIPSANPA
KTMQGSEVVNVLKSLLTNLDEVKKEREGLENDLKSVNFDMTSKFLTALAQDGVINEEAIS
VTELDRIYGGLTTKVQESLKKQEGLLKNIQVSHQEFSKMKQSNNEANLREEVLKNLAAAY
DNFVELVANLKEGTKFYNELTEILVRFQNKCSDIVFARKTERDELLKDLQQSIAREPSAP
SIPTPTYQSSPAGGHAPTPPTPAPRTMPPAKPQPPARPPPPVLPANRTPASAPAAALAPA
LAAAGTGTTVPAPSQTPGSAPLPQAQGPPYPTYPGYPGYCQMPMPMGYNPYAYGQYNMPY
PPVYHQSPGQAPYPGPQQPSYPFPQPPQQSYYPQQ
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttcatctcagtacagctgaaaaagacctcggaggtggacctggccaagccg
ctggtgaagttcatccagcagacgtacccgagcggcggggaggagcaggcccagtactgc
cgcgcggccgaggagctcagcaagctgcggcgcgccgcgctcggccgcccgctggacaag
cacgagggcgcgctcgagacgctgctgagatactatgatcagatctgttccattgaaccc
aaatttccattttctgaaaaccagatctgcttgacatttacgtggaaggatgcttttgat
aaaggttcactttttggaggatcggtaaaattggctcttgcaagcttaggatatgaaaag
agctgtgtgttgttcaattgtgcagccttagctagccagattgcagcagaacagaacctg
gataatgatgaaggattgaaaatcgctgctaaacattatcagtttgctagtggtgccttt
ttacacattaaagagaccgttttatctgccttgaatagagagcccactgtggacatatct
ccagacactgttgggaccctcagccttatcatgctggcccaggcccaagaagtgtttttt
ttaaaagccgcaagagataaaatgaaagatgccatcatagctaaattggctaatcaggct
gcagattattttggtgatgcttttaaacagtgtcagtacaaagatactctccccaaggag
gtgttccctgtcttggctgcaaagcactgtatcatgcaggcctatgctgagtaccaccag
tctatcctggcaaaacagcagaagaaatttggagaagagattgcacggctacagcatgca
gcagaattgataaaaacagtggcatctcgctatgatgaatatgtcaacgtgaaggaattt
tctgacaaaatcaaccgtgcccttactgcagcaaagaaggataatgacttcatctatcat
gatcgagttccagaccttaaagatctagaccctattggcaaagccacacttgtgaaatct
actccagtcaatgtacccatcagccagaaattcaccgatctgtttgagaagatggttcct
gtgtcagtccagcagtctttggctgcctataatcagaggaaagctgatttagttaacaga
tcaattgctcagatgagagaagccaccactttggcaaatggggtgttagcttcccttaat
cttccagcagcaattgaagatatatctggagataccgtacctcagtctatattgaccaag
tccacatctgtgattgaacagggaggcatccagactgttgatcagttgatcaaagagcta
cctgaacttctacaaagaaatagagaaatcctcgatgagtcattaaggttgttggatgaa
gaagaagcgactgacaatgatttaagggcaaaattcaaggaacgttggcaaagaacgcca
tccaatgaactttataagcctttaagaacagagggaaacaacttcagaaccgttttggat
aaagccgtgcaagcagatggacaggtgaaggagcgttaccaggctcaccgagacaccatt
gcacttctgtgtaagccggagccggagctgaatgctgccatcccttctgctaacccggcg
aagacaatgcagggcagtgaggtggtaaatgtcttaaaatccttattgacaaatcttgat
gaagtaaagaaggaaagagaggggctggagaatgacctgaaatcagtgaattttgacatg
acgagcaagtttctgactgctctggctcaagatggtgtgataaatgaagaagctatttct
gttactgaactggatcgaatctatgggggtctcacaactaaagtccaggaatctctaaag
aaacaggaaggacttcttaaaaatattcaggtctcacaccaggaattttcaaaaatgaaa
caatctaacaatgaagccaatttaagagaagaagtcttgaagaatttagctgctgcgtat
gacaactttgttgaacttgtggctaatttgaaggagggcacaaagttttacaatgagctg
actgaaatacttgtcaggttccagaacaagtgcagtgatatagtgttcgcacggaagaca
gaaagggatgagctcttaaaggacttgcaacaaagcattgccagagaaccgagtgctcct
tcaatcccaacacccacgtatcagtcctctccagctggggggcatgcaccgacgccgcca
actccagcaccaagaaccatgccgcctgctaagccccagcccccagcccggcctccacct
cctgtgctgccagcaaatcgaactcccgcttcagctccggctgcggctctagctccagcc
ctggctgcggcaggcactgggaccactgtaccagctccatcacagactcctggttcagct
cccctgcctcaggcccagggacccccataccccacctatccagggtatcccgggtattgc
cagatgcccatgcccatgggctacaatccttatgcgtatggccagtataatatgccgtat
ccaccagtgtatcaccagagccctgggcaggctccgtacccgggaccccagcagccttca
taccccttccctcagcccccacagcagtcttactatccacagcagtaa
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