Capra hircus (goat): 102180437
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Entry
102180437 CDS
T02910
Symbol
SCN3A
Name
(RefSeq) sodium channel protein type 3 subunit alpha
KO
K04836
voltage-gated sodium channel type III alpha
Organism
chx
Capra hircus (goat)
Pathway
chx04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
102180437 (SCN3A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
chx04040
]
102180437 (SCN3A)
Ion channels [BR:
chx04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102180437 (SCN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
GPHH
ATP-synt_B
Lustrin_cystein
IQ
Motif
Other DBs
NCBI-GeneID:
102180437
NCBI-ProteinID:
XP_005676090
EnsemblRapid:
ENSCHIG00000016974
LinkDB
All DBs
Position
2:complement(105085269..105202394)
Genome browser
AA seq
1999 aa
AA seq
DB search
MAQALLVPPGPESFRLFTRESLAAIEKRAAEEKAKKPKREQDNDDENEPKPNSDLEAGKN
LPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPLNPIRKI
AIKILVHSLFSMLIMCTILTNCVFMTLSNPPDWTKNVEYTFTGIYTFESLIKILARGFCL
EDFTFLRDPWNWLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPSDSAFETNTTSFFNGTMN
SNGTFVNVTMSTFNWKDYIEDDSHFYVLDGQNDPLLCGNGSDAGQCPEGYICVKAGRNPN
YGYTSFDTFSWAFLSLFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLIL
AVVAMAYEEQNQATLEEAEQKEAEFQQMLEQIKKQQEEAQAVAAASAASRDFSGIGGLGE
LLESSSEASKLSSKSAKEWRNRRKKRRQRENLEGNNKGEGNRFPKSESEDSVKRRSFLFS
MDGNRLTSDKKFYSPHQSLLSIRGSLFSPRRNSKTSIFSFRGRAKDIGSENDFADDEHST
FEDSESRRDSLFVPHRHGERRNSNVSQASMSSRMVPGLPANGKMHSTVDCNGVVSLVGGP
SALTSPTGHRPEGTTTETEVRKRRLSSYQISMEMLEDSSGRQRAMSIASILTNTMEELEE
SRQKCPPCWYRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEH
YPMTGQFSSVLTVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDGIIVSLSLMELGL
ANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGM
QLFGKSYKECVCKISSDCQLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCL
IVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDYVKNK
IRECFQNTFFRKPKVIEIHEGNKIDSCVSNNTGIEISKELNYLKDGNGTTSGVGTGSSAE
KYVIDENDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESELEESKEKLNATSSSEG
STVDVAPPREGEQAELEPEEDLKPEACFTEGCIKKFPFCQVSIEEGKGKIWWNLRKTCYS
IVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLLKWVA
YGFQTYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGM
RVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGNMFDVSEVNNL
SDCQALGKKARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRDVKLQPVYEEN
LYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGS
KKPQKPIPRPANKFQGMVFDFVTRQVFDISIMILICLNMVTMMVETDDQSKYMTLVLSRI
NLVFIILFTGEFVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFR
VIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVK
KEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPDAIHPGSSVKGDC
GNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKFD
PDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVL
GESGEMDALRIQMEDRFMASNPSKVSYEPITTTLKRKQEEVSAAIIQRNFRCYLLKQRLK
KVVNEYNKEAIKGRIDLPIKDDMIIDKLNGNSTPEKTDGSSSTTSPPSYDSVTKPDKEKF
EKDKPEKESKGKEVRENQK
NT seq
6000 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggcactgttggtacccccaggacctgaaagcttccgcctttttactagagaa
tctcttgctgctatcgaaaaacgtgctgcagaagagaaagccaagaaacccaagagagaa
caagacaatgatgatgagaacgaaccaaagccaaacagtgacttggaggctggaaagaat
cttccattcatttacggagacatccctccagggatggtgtcagagccactggaggacttg
gacccctactatatcaataagaaaacttttatagtattgaataaagggaaggcaattttc
cgattcagtgccacctctgccttgtatattttaactccactaaaccctattaggaaaatc
gctattaagattttggtacattctttattcagcatgcttatcatgtgcactatcttgacc
aactgtgtatttatgaccttgagtaatcctccagactggacaaagaatgtagagtacaca
ttcactggaatctatacctttgagtcacttataaaaatcttggcaagaggattttgctta
gaagattttacattccttcgtgacccatggaactggctggatttcagtgtcatagtcatg
gcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaaccttcagagtt
ctccgagctttgaaaacaatttcagtcattccaggtttaaagaccatcgtgggggccctg
atccagtctgtgaagaagctttctgacgtcatgatcttgactgtgttctgtctgagcgtg
tttgctctaattggtctgcagctgttcatgggcaacctgcggaataaatgcttacaatgg
cccccaagcgattctgcttttgaaaccaacaccacctctttctttaatggcacaatgaat
tcaaatgggacatttgttaatgtaacaatgagcacatttaactggaaggattacattgaa
gatgacagtcacttttatgttctggatggacaaaatgaccctttactgtgtggaaatgga
tcagatgcaggccaatgtccagaaggatacatttgtgtgaaggctggccgaaaccccaac
tatggctacacaagcttcgacacttttagctgggctttcttgtctctatttcgactcatg
actcaagactactgggagaacctttatcagctgacattacgtgctgctgggaaaacatac
atgatattttttgtgctggtgattttcttgggctcgttttatctggtgaatttgatcctg
gctgtggtggccatggcctatgaggaacagaatcaggcaacgctggaagaggcggagcag
aaagaggctgaatttcagcagatgctggaacagattaaaaagcaacaggaagaagctcag
gcagttgcagcagcatcagctgcttcaagagatttcagtggaataggtgggttaggagag
ctcttggaaagttcatcagaagcatcaaaattaagctccaaaagtgccaaggagtggagg
aaccgaagaaaaaaaagaagacagagggagaatcttgaaggaaacaacaaaggagaggga
aacaggtttcccaagtctgaatctgaggacagtgtcaaaagaagaagtttccttttctcc
atggatggaaatcgactaactagcgacaagaaattctactcccctcatcagtctctgtta
agtatccgtggttccctgttttccccacgacgcaatagcaaaacaagtattttcagcttc
agaggtcgggcaaaggatatcggttctgaaaatgactttgctgatgatgaacacagtaca
tttgaagacagcgagagcaggagagactcactgtttgtgccgcacagacacggagagcga
cgcaacagtaacgttagtcaggccagtatgtcatccaggatggtgccagggcttccagcc
aatgggaagatgcacagcactgtggattgcaatggtgtggtttccttggtgggtggacca
tcagctctaacctcacctactggacatcggccagagggtaccaccactgaaacggaagtc
agaaagagaaggctaagttcttaccagatttcaatggagatgctagaagattcctccgga
aggcaaagagccatgagcatagccagcatcttgactaacacgatggaggaacttgaagaa
tctaggcagaaatgtccaccatgctggtatagatttgccaatatgttcttgatctgggac
tgctgtgatgcgtggttaaaagtgaagcatcttgtgaatttaattgttatggatccattt
gttgatcttgccatcactatttgcattgtcttaaacaccctcttcatggccatggagcac
taccccatgactggtcaattcagtagtgtgttaactgtaggaaacctggtcttcactggg
atcttcacagcagaaatggtcctcaagatcatcgccatggatccatattactatttccaa
gagggctggaatatctttgatggaattattgtcagccttagtttgatggagcttggcctg
gcaaatgtggagggactgtctgtactgagatcattcagactgcttcgagttttcaagttg
gcaaaatcctggcccaccctgaatatgctaattaagatcatcggtaattcagtgggagct
ctgggtaacctcacgctggtgttggccatcatcgtcttcatttttgcggtggtcggcatg
cagctctttgggaagagctacaaagaatgtgtgtgcaagatttctagtgattgtcaactc
cctcgctggcacatgaacgacttcttccactccttcctgattgtgttccgggtgctgtgt
ggagagtggatagagaccatgtgggactgcatggaggtcgccggtcaaaccatgtgcctt
attgtcttcatgctggtcatggtcattggaaacctggtggttctgaacctctttctggcc
ttattgttgagttcatttagctcagacaatcttgctgctactgatgatgataatgaaatg
aacaatctccagattgcagtaggaaggatgcaaaagggaattgattatgtgaaaaataag
atacgggagtgtttccaaaacacctttttcagaaagccaaaagttatagaaatccatgaa
ggcaacaaaatagacagctgtgtgtctaataatactggaattgaaataagcaaagagctt
aattatcttaaagatgggaatggaaccaccagtggtgtaggtactggaagcagtgctgaa
aaatatgtaattgatgaaaacgattatatgtcattcataaacaatcccagcctcactgta
acagtgccaattgctgttggagagtctgactttgaaaatttaaatactgaggagttcagc
agtgagtcagaactagaagaaagcaaagagaaattaaatgcaaccagctcatctgaagga
agtacagttgatgttgctccacctcgagaaggtgaacaagctgaacttgaacctgaggag
gaccttaaaccagaagcttgttttactgaaggatgtattaaaaaatttccattctgtcaa
gtaagtatagaagaaggcaaaggaaaaatctggtggaatcttcggaaaacctgctacagc
attgttgaacacaactggtttgagactttcattgtcttcatgattcttctcagcagtggc
gctttggcttttgaagacatatacattgaacagcgaaagactattaaaaccatgctcgaa
tatgccgacaaggtcttcacttacatattcatcctggaaatgcttctcaaatgggtagct
tacggatttcagacatatttcactaatgcctggtgctggctagatttcttgatcgtcgat
gtttctttggttagcttggtagccaatgctcttggctactcagaacttggtgccatcaaa
tccctacggacattaagagctttaagaccactgagagctttatcccggtttgaaggcatg
agggtcgttgtgaatgcccttgttggagcgattccctctatcatgaatgtgctgttggtg
tgtctcatcttctggctgatctttagcattatgggtgtgaatttgtttgctggcaagttc
tatcactgtgtaaacactacaacgggtaacatgtttgatgttagtgaagttaacaatttg
agtgactgtcaggctcttggcaagaaagctcggtggaaaaatgtgaaagtaaattttgat
aatgttggcgctggctatcttgcactgcttcaagtggccacatttaaaggctggatggac
attatgtatgcagctgttgattcacgagatgttaaacttcagcctgtatatgaagaaaat
ctgtatatgtacttatactttgtcatctttatcatctttgggtcattcttcactctgaat
ctattcattggtgtcatcatagataacttcaaccaacagaaaaagaagtttggaggtcaa
gacatctttatgacagaggaacagaaaaaatactacaatgcaatgaagaaacttgggtct
aagaaacctcagaaacccatacctcggcctgcaaacaaattccaaggaatggtctttgat
tttgtcaccagacaagtttttgatatcagtatcatgatccttatctgtctcaatatggtc
actatgatggtagaaactgatgaccagagcaaatatatgactctagttttgtcccgaatc
aaccttgtattcattatcttgttcactggagaatttgtgctgaaattgatctccctcaga
tactactacttcaccataggttggaacatctttgattttgtggtagtgattctttccatc
gtaggtatgtttctggctgagctgatagagaaatattttgtgtcccctaccttgttccga
gtgatccgtcttgccaggattggccgaatcctgcgtctgatcaaaggggccaaggggatc
cgcacgctgctctttgctttgatgatgtcccttcctgcgctgtttaacatcggcctcctg
ctcttcctggtcatgttcatctatgccatctttggaatgtccaactttgcctatgttaaa
aaggaagctggaattgatgacatgttcaactttgagacctttggcaacagcatgatctgc
ctgttccagattaccacctctgctggctgggatggattgctagcgcctatcctcaacagt
gcaccaccggactgtgaccctgacgcaattcaccctggcagctcagttaagggagactgt
ggaaacccatctgttgggattttctttttcgtcagttacatcatcatatcatttctggtc
gtggtgaacatgtacattgctgtcatcctggagaacttcagtgttgctactgaggaaagc
gcagagcccctgagtgaggacgactttgagatgttctacgaggtttgggagaagtttgat
cccgacgccacccagttcatagagttctccaagctctctgattttgcagctgccctggat
cctcctcttctcatagcaaaaccgaacaaagtccagctcattgccatggacctgcccatg
gtcagtggggacaggatccactgccttgacatcttatttgcctttacaaagcgtgttttg
ggtgagagtggagagatggacgcccttcgaattcagatggaagatcggttcatggcgtca
aacccctccaaagtctcctatgagcccattacaaccactctgaaacgcaaacaagaggag
gtgtctgctgctatcattcagcgtaatttcaggtgttatcttttaaagcaaaggttaaag
aaggtagtaaatgagtataacaaagaggcaatcaaagggaggattgacttacctataaaa
gatgacatgattattgacaaattaaatgggaactccaccccagaaaaaacagatggaagt
tcctctaccacctctcctccttcctatgatagtgtaacaaagccagacaaagaaaaattt
gagaaggacaaaccagaaaaagaaagcaaagggaaagaggtcagggaaaatcaaaagtaa
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integrated database retrieval system
