Capra hircus (goat): 102180777
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Entry
102180777 CDS
T02910
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
chx
Capra hircus (goat)
Pathway
chx04140
Autophagy - animal
chx04211
Longevity regulating pathway
chx05010
Alzheimer disease
chx05014
Amyotrophic lateral sclerosis
chx05016
Huntington disease
chx05017
Spinocerebellar ataxia
chx05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102180777 (RB1CC1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
102180777 (RB1CC1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
102180777 (RB1CC1)
05014 Amyotrophic lateral sclerosis
102180777 (RB1CC1)
05016 Huntington disease
102180777 (RB1CC1)
05017 Spinocerebellar ataxia
102180777 (RB1CC1)
05022 Pathways of neurodegeneration - multiple diseases
102180777 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
chx01009
]
102180777 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chx04131
]
102180777 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
chx03029
]
102180777 (RB1CC1)
Protein phosphatases and associated proteins [BR:
chx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102180777 (RB1CC1)
Membrane trafficking [BR:
chx04131
]
Autophagy
Autophagosome formation proteins
ULK complex
102180777 (RB1CC1)
Mitochondrial biogenesis [BR:
chx03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
102180777 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
102180777
NCBI-ProteinID:
XP_017914003
UniProt:
A0A452F1K3
LinkDB
All DBs
Position
14:60527691..60568444
Genome browser
AA seq
1589 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILSERLPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQ
SVEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRADSLPEREGSEKAETKTSTEL
VLSPDTPAATSKPSLTSFHMSVEHIAPDAADAESGKDVREPCPSPAQRDAAAVEAKEGDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFMAECRQTIANLDNQNMKA
IKGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKQLYEAEKSKRESFGKL
FRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASASQTSPQSASSPRLESATG
ITTATSPRTPPPLAVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEHTLHQASLDL
DSLAESPESDFMSAVNEFVIEEQLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTR
TPGQEDPGNRTSLSAQLGRCRASAHDSHLSIQTLKEDFCHFRTFVQKEQCDFANSLQCTA
VEIRSVIDKVKLSLEVTLHEKHQKELESLKSEYEGRLSTLVKESEENKSKITKLRGDLAC
LEEVLQNKDNEFALVKHEKEAVICLQKEKDQKLLEMERAVHSQHCEVEALRQSRETALED
LRKLHVENDEKLQLLRAELQRLEQSHLKELEDTLQVRHTQELEKAMSEHRLCLEKLEMEN
QQRIEQIQDSHAAVIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKMLLEES
RTQEKKTLQSLFEKETEQLRAEISKLNQKIHDNNENYQVGLAELRTLMTVEKDQCISELI
SRHEEESNRLTTDLNKMTSLYQQAFEIEKGLKEELAELQSKLDSELSALEKQKDEKISQQ
EVMYKAIIQKLEKDKEEFVMRQERDREQLVQRLNCEKEAAVETARKEMHLEREAVEKELL
EKVKHLESQLAKSHAMESAREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVR
TSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEE
KKRLEEEVSRLRGGAFVPSPGVAAAPELYGACAPEAPVEALDTLGEGRPDSAMETSTMSV
QENVHVLSEERQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGD
LVLIILDERHDNYVLFTVSPTLYFLHAESLPALDLRPGEGASGASRRPWVLGKVMEKEYC
QAKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtatttctggtgaacactggaacaaccctgacatttgacactgaactt
acagtgcaaactgtggctgacctgaagcatgcgatccacagcaagtacaagatcgccatt
cagcaccaggtgctggtggtcaacgggggcgagtgcatggctgccgaccgcagggtgtgc
acctacagcgctgggacggacacaaatccaatttttctttttaacaaggaaatgatcttg
tctgagcgtctacctgctattcctaaaactaccttttcaacagaaaatgacatggaaata
aaagtcgaagagtcccttatgatgcctgctgtttttcacactgttgcttcaaggacacaa
cttgcagtggaaatgtatgaagttgccaagaaactctgctctttctgtgaaggtctggtc
catgatgaacatcttcagcaccaaggctgggctgcaattatggccaatctggaagattgc
tcaaattcctaccaaaagctgcttttcaaatttgaaagtatttattcaaattatctgcaa
tccgtagaagacatcaaattaaaacttactcatttaggaactgcggtttcagtcatggcc
aagattccgctgttggagtgcctcaccagacacagttacagggaatgtctggggagagca
gattccttgcctgaacgtgaaggctcagaaaaggctgagacgaagacctccactgaactg
gtgctctctcctgatacgcctgcagcaacgagcaaaccctcgttaacctcatttcacatg
tctgtggagcacatagccccagacgccgcagatgctgaaagtggaaaagatgtgagggag
ccttgtccaagccctgcccagcgggacgcagctgcagtagaggctaaagagggggacctg
cctttctttaatgtttctctgttagactggatcaacgtgcaggacaggcctaatgacgtc
gaatccttggtcaggaagtgctttgattccatgagcaggcttgatccccggatcattcga
ccctttatggcagaatgccgtcagactattgccaatcttgataatcagaacatgaaagcc
atcaagggcctggaggaccggctgtacgccctggaccagatgattgccagctgcggccga
ctggtcaatgagcagaaagaactcgctcagggatttttagctaatcagatgagagctgaa
aacttgaaggatgcatctgtgctacctgatttgtgcctgagtcatgcaaatcagttgatg
attatgttgcaaaaccatagaaagctgttggacattaaacagaagtgcaccactgccaaa
caggagctcgcaaataaccttcatgtcagactcaagtggtgttgctttgtgatgctccac
gctgatcaggatggagagaagttgcaggctttgctccgcctggttatcgagctcttagaa
agagtcaagatcgtagaagctctgagcacagttcctcagatgtactgcttagctgttgtt
gaggttgtcaggagaaaaatgttcataaaacactacagggagtgggccggtgctttagtc
aaggacggaaagcaattatatgaggctgagaagtcaaaaagggaatcctttgggaaatta
tttaggaagtcttttctaagaaatcgtctgttcaggggattggactcctggcccccatcc
ttttgtacacagaagcctcgaaagtttgactgtgaacttccagatatttcattaaaagat
ttacagtttctgcaatcattttgtccttctgaagttcagccattcctcagggttccctta
ctttgtgactttgaacctctccaccagcatgtactcgctctgcataatttggtaaaagca
gcacaaagtttggatgaaatgtcacagaccattacagacctgctgagtgaacaaaaggcc
tctgcgagtcagacgtccccacagtcggcttcctcgccccggctggaaagcgcgacagga
atcacaaccgctacctcacccaggacaccgcctccactcgccgtgcaggatcccctgtgt
cctgcggtctgccccttagaggagctgtcaccagacagcattgatgcccacacgttcgac
tttgagactatcccccatccaaatatagagcatactctccaccaggcctccttagacttg
gattcactagcagaaagtcctgagtcggactttatgtctgcggtgaacgaatttgtcata
gaggagcagctatcgtctccaaaccccatcagcgacccgcagagcccggagatgatggtg
gagtccctctactcctctgtcatcaacgccattgacagcaggcggatgcaggacaccagg
acccccggtcaggaggacccgggcaaccgcacgtccctcagtgcccagctggggaggtgc
cgcgcatccgcccacgactcgcaccttagcattcagaccctgaaggaggacttctgccac
ttccggacgttcgtgcagaaggaacagtgcgactttgccaattccttgcagtgtacagca
gtagaaataagaagcgttatcgacaaagtaaagctctctttggaagtaacactacatgag
aaacatcaaaaagaactagagtctttaaaaagcgagtacgagggcaggctctctaccctg
gtgaaggagagtgaagagaacaagagcaagatcaccaagctgcggggggacctggcgtgc
ctggaggaggtgctgcagaacaaggataacgagttcgctctggtcaagcacgagaaggaa
gccgtcatctgcctgcagaaagagaaggaccagaagctgctcgagatggagcgcgcagtg
catagccagcactgtgaggtggaggcactgcggcagtcgcgcgagactgcgctggaggac
ttgaggaagctccacgtggagaatgacgagaagctccagctactgcgggcagagctccag
cgcctggagcagagtcatctgaaagagctggaggacacactacaggtccgtcacacacag
gagttggagaaggccatgagcgagcacaggctctgcttggagaaactagaaatggaaaac
cagcagaggatcgagcagatccaagattctcatgccgcagtcatccaggagaaggagcag
cagctccaggagttaaagctcaaggtttcggatttgtcggacatgagatgtaagttagag
gtggagctggccctgaaggaagcagaaactgatgagataaaaatgttgctggaagaaagc
agaacccaggagaagaagaccttgcagtctctcttcgaaaaagagaccgaacagttgaga
gcagaaatcagtaaactaaaccaaaagattcacgacaataatgaaaattatcaggtgggc
ttggcagagctgagaactttaatgacagttgaaaaagatcagtgcatttctgagttaatt
agtagacacgaagaagaatctaataggcttacaactgatttaaacaaaatgacatcgttg
tatcagcaagcatttgaaatagaaaaaggcctgaaagaagaattagctgaactgcagagt
aaattggactcagaattgagtgctcttgaaaaacaaaaagatgagaaaatctcccagcaa
gaggttatgtacaaagctattatccagaagctagagaaagacaaagaggaatttgtcatg
agacaggaacgggaccgagaacagttagttcagaggcttaattgtgaaaaagaagctgct
gttgagactgccagaaaagaaatgcacttggaaagagaagctgttgagaaagagttgtta
gagaaagttaaacatcttgagagtcaattagcaaaaagtcatgccatggaatctgccaga
gaagattcttcaagcctagttgctgaacttcaagaaaagctccaggaagaaaaagctaag
tttctagaacaacttgaagagcaggagaagaggaagaatgaggagatgcagaatgttcga
acatctttgattgctgagcagcagaccaattttaacactgttttaacaagagagaaaatg
aggaaagaaaacataatcaatgatctcagtgataagctcaagagcacaatgcagcagcag
gagcgggacaaagatttgatcgagtccctgtctgaggaccgcgcacgtctgctggaggag
aagaagcgactggaggaggaggtcagccggctgcggggcggtgccttcgtgccctccccg
ggtgtggccgcagcccccgagttgtacggggcctgtgcgcctgaggccccggtagaggcc
ctggacacccttggtgaggggaggccagactcagccatggagaccagcacgatgtctgtc
caagaaaacgtccatgtgctctctgaagaaagacagcggataatgctgttggaacgaaca
ctacagttgaaagaagaagagaacaagcggttaaatcagaggctgatgtctcagagcatg
tcttccgtgtcctcgaggcattctgagaagatagccattagagatttccaggtgggcgac
ctggtgctcatcatcttggacgagcgccacgacaactacgtgctcttcacggtgagcccc
accctgtacttcctgcacgcggagtccctgcccgccctggacctcaggccgggagagggc
gcttcaggtgcatctcgaagaccctgggtccttggaaaagtgatggaaaaggagtactgc
caggccaaaaaggcacaaaacagatttaaagttcctttggggacaaagttttacagagtg
aaagctgtgtcatggaataagaaagtataa
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integrated database retrieval system
